Protein–RNA interactions for Protein: O00148

DDX39A, ATP-dependent RNA helicase DDX39A, humanhuman

Known RBP Predictions only

Length 427 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39AO00148 ULK4P2-204ENST00000569682 798 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
DDX39AO00148 AC103808.4-201ENST00000577258 391 ntTSL 3 BASIC6.42□□□□□ -1.38
DDX39AO00148 AP000897.2-201ENST00000579509 1057 ntTSL 3 BASIC6.42□□□□□ -1.38
DDX39AO00148 YTHDC1-207ENST00000579690 2983 ntAPPRIS ALT2 TSL 5 BASIC6.42□□□□□ -1.38
DDX39AO00148 FAM72A-208ENST00000607379 1139 ntBASIC6.42□□□□□ -1.38
DDX39AO00148 MIR6886-201ENST00000619864 61 ntBASIC6.42□□□□□ -1.38
DDX39AO00148 CU638689.1-201ENST00000623225 897 ntTSL 3 BASIC6.42□□□□□ -1.38
DDX39AO00148 AC079298.3-203ENST00000623269 555 ntTSL 3 BASIC6.42□□□□□ -1.38
DDX39AO00148 CU634019.4-201ENST00000623347 897 ntTSL 3 BASIC6.42□□□□□ -1.38
DDX39AO00148 AC009120.7-201ENST00000623452 780 ntBASIC6.42□□□□□ -1.38
DDX39AO00148 AC138627.1-204ENST00000641894 765 ntBASIC6.42□□□□□ -1.38
DDX39AO00148 SRGAP1-201ENST00000355086 23331 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
DDX39AO00148 AL606516.1-201ENST00000455438 1861 ntTSL 2 BASIC6.42□□□□□ -1.38
DDX39AO00148 PPP1R1C-201ENST00000280295 1636 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
DDX39AO00148 ATP5A1P4-201ENST00000556888 1605 ntBASIC6.42□□□□□ -1.38
DDX39AO00148 RIC3-202ENST00000335425 5223 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
DDX39AO00148 FGL1-209ENST00000522444 1367 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
DDX39AO00148 SPARCL1-202ENST00000418378 2994 ntAPPRIS P1 TSL 5 BASIC6.42□□□□□ -1.38
DDX39AO00148 NRCAM-202ENST00000379022 3900 ntTSL 5 BASIC6.42□□□□□ -1.38
DDX39AO00148 LINC02019-201ENST00000608605 2060 ntBASIC6.41□□□□□ -1.38
DDX39AO00148 MYBPC1-209ENST00000547509 3749 ntAPPRIS ALT2 TSL 5 BASIC6.41□□□□□ -1.38
DDX39AO00148 GNG2-212ENST00000556752 3424 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
DDX39AO00148 DSC3-201ENST00000360428 6939 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
DDX39AO00148 NRDE2-201ENST00000354366 14208 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
DDX39AO00148 EMC2-201ENST00000220853 1243 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
DDX39AO00148 OR5M8-201ENST00000327216 1047 ntAPPRIS P1 BASIC6.41□□□□□ -1.38
DDX39AO00148 AL139095.4-201ENST00000379928 500 ntTSL 2 BASIC6.41□□□□□ -1.38
DDX39AO00148 AC005323.2-201ENST00000399342 583 ntTSL 3 BASIC6.41□□□□□ -1.38
DDX39AO00148 GPC5-AS2-201ENST00000417589 401 ntTSL 3 BASIC6.41□□□□□ -1.38
DDX39AO00148 TNPO1P1-201ENST00000423641 1138 ntBASIC6.41□□□□□ -1.38
DDX39AO00148 TSSK4-203ENST00000428351 576 ntTSL 2 BASIC6.41□□□□□ -1.38
DDX39AO00148 USP24P1-201ENST00000433802 779 ntBASIC6.41□□□□□ -1.38
DDX39AO00148 AL139280.1-201ENST00000436340 463 ntTSL 3 BASIC6.41□□□□□ -1.38
DDX39AO00148 LINC01773-201ENST00000437598 787 ntTSL 2 BASIC6.41□□□□□ -1.38
DDX39AO00148 DNAJC19P5-201ENST00000443295 316 ntBASIC6.41□□□□□ -1.38
DDX39AO00148 CYCSP51-201ENST00000443545 318 ntBASIC6.41□□□□□ -1.38
DDX39AO00148 AP006216.2-201ENST00000457746 333 ntTSL 5 BASIC6.41□□□□□ -1.38
DDX39AO00148 AP002371.1-201ENST00000463604 433 ntBASIC6.41□□□□□ -1.38
DDX39AO00148 RPS23P2-201ENST00000463671 415 ntBASIC6.41□□□□□ -1.38
DDX39AO00148 LINC02339-201ENST00000472649 752 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
DDX39AO00148 AL136038.1-201ENST00000497246 351 ntBASIC6.41□□□□□ -1.38
DDX39AO00148 OR9A4-201ENST00000548136 1093 ntAPPRIS P1 BASIC6.41□□□□□ -1.38
DDX39AO00148 AL157756.1-203ENST00000553269 600 ntTSL 3 BASIC6.41□□□□□ -1.38
DDX39AO00148 AC073964.1-201ENST00000558938 308 ntTSL 3 BASIC6.41□□□□□ -1.38
DDX39AO00148 AP005230.1-203ENST00000582086 887 ntTSL 2 BASIC6.41□□□□□ -1.38
DDX39AO00148 AL589674.2-201ENST00000604304 337 ntBASIC6.41□□□□□ -1.38
DDX39AO00148 AC087468.1-201ENST00000604365 630 ntBASIC6.41□□□□□ -1.38
DDX39AO00148 AC090607.5-201ENST00000615692 224 ntBASIC6.41□□□□□ -1.38
DDX39AO00148 AL391425.1-202ENST00000617518 774 ntTSL 5 BASIC6.41□□□□□ -1.38
DDX39AO00148 HOTTIP_3.1-201ENST00000619957 337 ntBASIC6.41□□□□□ -1.38
DDX39AO00148 AL691477.1-201ENST00000624398 162 ntBASIC6.41□□□□□ -1.38
DDX39AO00148 CARD6-201ENST00000254691 4221 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
DDX39AO00148 SENP8-202ENST00000542035 1672 ntAPPRIS P1 TSL 2 BASIC6.41□□□□□ -1.38
DDX39AO00148 INPP4B-214ENST00000508116 3165 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
DDX39AO00148 CDON-206ENST00000531738 5803 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
DDX39AO00148 CAPN6-201ENST00000324068 3568 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
DDX39AO00148 KRT222-202ENST00000394052 1712 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
DDX39AO00148 ZNF266-207ENST00000592904 4401 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
DDX39AO00148 NCOA7-201ENST00000229634 2998 ntAPPRIS ALT2 TSL 2 BASIC6.41□□□□□ -1.38
DDX39AO00148 PSMB2-202ENST00000621781 4217 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
DDX39AO00148 MEMO1-202ENST00000379383 1498 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
DDX39AO00148 SETDB2-205ENST00000611815 5313 ntAPPRIS ALT2 TSL 5 BASIC6.4□□□□□ -1.38
DDX39AO00148 AC068769.1-201ENST00000474767 2426 ntBASIC6.4□□□□□ -1.38
DDX39AO00148 URI1-201ENST00000360605 1579 ntAPPRIS ALT2 TSL 1 (best) BASIC6.4□□□□□ -1.38
DDX39AO00148 DLG1-213ENST00000443183 2516 ntTSL 2 BASIC6.4□□□□□ -1.38
DDX39AO00148 AC067956.1-201ENST00000414512 2062 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
DDX39AO00148 ALG2-202ENST00000319033 1627 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
DDX39AO00148 PIGN-217ENST00000591238 1622 ntTSL 5 BASIC6.4□□□□□ -1.38
DDX39AO00148 ESRRG-204ENST00000361525 5363 ntAPPRIS P1 TSL 5 BASIC6.4□□□□□ -1.38
DDX39AO00148 ZMAT1-201ENST00000372782 3185 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.38
DDX39AO00148 RNA5SP91-201ENST00000390902 119 ntBASIC6.4□□□□□ -1.38
DDX39AO00148 CPB2-AS1-201ENST00000415033 747 ntTSL 3 BASIC6.4□□□□□ -1.38
DDX39AO00148 BMS1P17-202ENST00000416720 316 ntBASIC6.4□□□□□ -1.38
DDX39AO00148 NENFP1-201ENST00000419476 466 ntBASIC6.4□□□□□ -1.38
DDX39AO00148 AC008164.1-201ENST00000423925 564 ntTSL 4 BASIC6.4□□□□□ -1.38
DDX39AO00148 TMEM244-202ENST00000438392 565 ntAPPRIS P1 TSL 5 BASIC6.4□□□□□ -1.38
DDX39AO00148 AL392089.1-202ENST00000444793 449 ntTSL 2 BASIC6.4□□□□□ -1.38
DDX39AO00148 LINC01911-201ENST00000450667 806 ntTSL 5 BASIC6.4□□□□□ -1.38
DDX39AO00148 AL358612.1-201ENST00000452911 481 ntTSL 3 BASIC6.4□□□□□ -1.38
DDX39AO00148 LINC02147-201ENST00000509367 807 ntTSL 2 BASIC6.4□□□□□ -1.38
DDX39AO00148 AC074255.1-201ENST00000511259 501 ntBASIC6.4□□□□□ -1.38
DDX39AO00148 KCTD9P6-201ENST00000522306 950 ntBASIC6.4□□□□□ -1.38
DDX39AO00148 AC107884.2-201ENST00000530963 550 ntTSL 4 BASIC6.4□□□□□ -1.38
DDX39AO00148 AC016257.1-201ENST00000550088 641 ntTSL 2 BASIC6.4□□□□□ -1.38
DDX39AO00148 AC026992.1-201ENST00000558269 571 ntTSL 2 BASIC6.4□□□□□ -1.38
DDX39AO00148 AC010547.7-201ENST00000570323 333 ntBASIC6.4□□□□□ -1.38
DDX39AO00148 AL157938.2-209ENST00000589128 792 ntTSL 2 BASIC6.4□□□□□ -1.38
DDX39AO00148 ZNF208-204ENST00000599916 740 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
DDX39AO00148 AL513327.3-201ENST00000602618 469 ntBASIC6.4□□□□□ -1.38
DDX39AO00148 MIR6768-201ENST00000610734 72 ntBASIC6.4□□□□□ -1.38
DDX39AO00148 AC022960.2-201ENST00000616300 666 ntBASIC6.4□□□□□ -1.38
DDX39AO00148 UBA3-213ENST00000631029 123 ntTSL 5 BASIC6.4□□□□□ -1.38
DDX39AO00148 IQCM-205ENST00000636414 1844 ntAPPRIS ALT2 TSL 5 BASIC6.4□□□□□ -1.38
DDX39AO00148 AL929601.4-201ENST00000613011 1341 ntBASIC6.4□□□□□ -1.39
DDX39AO00148 AL117378.2-201ENST00000622916 1337 ntBASIC6.4□□□□□ -1.39
DDX39AO00148 ARIH1-201ENST00000379887 21681 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.39
DDX39AO00148 AC034229.2-201ENST00000566945 2508 ntBASIC6.4□□□□□ -1.39
DDX39AO00148 TTC39B-207ENST00000507993 1950 ntAPPRIS ALT2 TSL 2 BASIC6.4□□□□□ -1.39
DDX39AO00148 FOXN2-201ENST00000340553 5408 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.39
DDX39AO00148 LINC01179-201ENST00000507838 2163 ntTSL 1 (best) BASIC6.4□□□□□ -1.39
Retrieved 100 of 98,524 protein–RNA pairs in 92.1 ms