Protein–RNA interactions for Protein: Q9UBD9

CLCF1, Cardiotrophin-like cytokine factor 1, humanhuman

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCF1Q9UBD9 Z98949.1-203ENST00000597284 851 ntTSL 5 BASIC5.13□□□□□ -1.59
CLCF1Q9UBD9 FO393422.1-201ENST00000603908 708 ntBASIC5.13□□□□□ -1.59
CLCF1Q9UBD9 AP000894.4-201ENST00000610185 483 ntBASIC5.13□□□□□ -1.59
CLCF1Q9UBD9 SLC8A1-AS1-218ENST00000610721 956 ntTSL 5 BASIC5.13□□□□□ -1.59
CLCF1Q9UBD9 AL138960.1-201ENST00000613838 513 ntBASIC5.13□□□□□ -1.59
CLCF1Q9UBD9 AL513314.2-202ENST00000617077 536 ntTSL 5 BASIC5.13□□□□□ -1.59
CLCF1Q9UBD9 AL391425.1-202ENST00000617518 774 ntTSL 5 BASIC5.13□□□□□ -1.59
CLCF1Q9UBD9 AL513314.2-201ENST00000621440 545 ntTSL 5 BASIC5.13□□□□□ -1.59
CLCF1Q9UBD9 CEP85L-201ENST00000360290 1736 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
CLCF1Q9UBD9 C1orf112-201ENST00000286031 4355 ntAPPRIS P3 TSL 1 (best) BASIC5.13□□□□□ -1.59
CLCF1Q9UBD9 NLRP11-204ENST00000592953 3077 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
CLCF1Q9UBD9 BBX-201ENST00000325805 3517 ntAPPRIS ALT2 TSL 1 (best) BASIC5.13□□□□□ -1.59
CLCF1Q9UBD9 AC117409.1-201ENST00000470499 1310 ntBASIC5.13□□□□□ -1.59
CLCF1Q9UBD9 FAM72B-201ENST00000355228 1773 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
CLCF1Q9UBD9 EFCAB5-201ENST00000394835 5132 ntAPPRIS P2 TSL 1 (best) BASIC5.13□□□□□ -1.59
CLCF1Q9UBD9 BCL2L14-213ENST00000589718 1850 ntAPPRIS P1 TSL 5 BASIC5.13□□□□□ -1.59
CLCF1Q9UBD9 WDR63-202ENST00000326813 2888 ntAPPRIS ALT2 TSL 2 BASIC5.13□□□□□ -1.59
CLCF1Q9UBD9 TBCK-205ENST00000432496 3362 ntAPPRIS P1 TSL 2 BASIC5.13□□□□□ -1.59
CLCF1Q9UBD9 ZNF630-202ENST00000409324 2455 ntAPPRIS P2 TSL 1 (best) BASIC5.13□□□□□ -1.59
CLCF1Q9UBD9 TRIQK-223ENST00000537541 3510 ntAPPRIS P1 TSL 3 BASIC5.13□□□□□ -1.59
CLCF1Q9UBD9 MIR4435-2HG-207ENST00000439362 1522 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
CLCF1Q9UBD9 UGT2B11-201ENST00000446444 2088 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
CLCF1Q9UBD9 AC027279.4-201ENST00000624371 2072 ntBASIC5.12□□□□□ -1.59
CLCF1Q9UBD9 RNF150-202ENST00000420921 3673 ntTSL 2 BASIC5.12□□□□□ -1.59
CLCF1Q9UBD9 SETDB2-201ENST00000258672 2138 ntTSL 5 BASIC5.12□□□□□ -1.59
CLCF1Q9UBD9 ADAM21-201ENST00000603540 2658 ntAPPRIS P1 TSL 3 BASIC5.12□□□□□ -1.59
CLCF1Q9UBD9 SLC38A1-211ENST00000612161 1607 ntTSL 5 BASIC5.12□□□□□ -1.59
CLCF1Q9UBD9 TTC21B-201ENST00000243344 5482 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
CLCF1Q9UBD9 HSPD1P8-201ENST00000400121 1658 ntBASIC5.12□□□□□ -1.59
CLCF1Q9UBD9 PPARGC1A-201ENST00000264867 6318 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
CLCF1Q9UBD9 AC099506.1-201ENST00000567359 4037 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
CLCF1Q9UBD9 PTPRD-206ENST00000397617 8248 ntTSL 5 BASIC5.12□□□□□ -1.59
CLCF1Q9UBD9 PUS3-203ENST00000530811 1792 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
CLCF1Q9UBD9 MOSPD2-201ENST00000380492 4163 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
CLCF1Q9UBD9 VCAN-201ENST00000265077 12625 ntAPPRIS P3 TSL 1 (best) BASIC5.12□□□□□ -1.59
CLCF1Q9UBD9 ATF7IP2-204ENST00000396560 3665 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
CLCF1Q9UBD9 AC015799.1-201ENST00000622996 3122 ntBASIC5.12□□□□□ -1.59
CLCF1Q9UBD9 ELMO1-207ENST00000442504 3154 ntAPPRIS P1 TSL 2 BASIC5.12□□□□□ -1.59
CLCF1Q9UBD9 OR5M8-201ENST00000327216 1047 ntAPPRIS P1 BASIC5.12□□□□□ -1.59
CLCF1Q9UBD9 AGBL4-201ENST00000334103 881 ntTSL 5 BASIC5.12□□□□□ -1.59
CLCF1Q9UBD9 NIFKP3-201ENST00000417799 865 ntBASIC5.12□□□□□ -1.59
CLCF1Q9UBD9 AC113412.1-201ENST00000425840 504 ntBASIC5.12□□□□□ -1.59
CLCF1Q9UBD9 AL157371.1-201ENST00000451910 394 ntTSL 3 BASIC5.12□□□□□ -1.59
CLCF1Q9UBD9 AC079896.1-201ENST00000455845 488 ntTSL 3 BASIC5.12□□□□□ -1.59
CLCF1Q9UBD9 RN7SL72P-201ENST00000460697 269 ntBASIC5.12□□□□□ -1.59
CLCF1Q9UBD9 AC073610.1-201ENST00000489971 396 ntBASIC5.12□□□□□ -1.59
CLCF1Q9UBD9 LINC00518-204ENST00000491317 1228 ntTSL 2 BASIC5.12□□□□□ -1.59
CLCF1Q9UBD9 RN7SL466P-201ENST00000497546 295 ntBASIC5.12□□□□□ -1.59
CLCF1Q9UBD9 AC111000.5-201ENST00000506559 1178 ntBASIC5.12□□□□□ -1.59
CLCF1Q9UBD9 SPINK13-202ENST00000511106 661 ntAPPRIS ALT2 TSL 1 (best) BASIC5.12□□□□□ -1.59
CLCF1Q9UBD9 TOMM22P4-201ENST00000511318 336 ntBASIC5.12□□□□□ -1.59
CLCF1Q9UBD9 AC091987.1-201ENST00000517758 464 ntTSL 3 BASIC5.12□□□□□ -1.59
CLCF1Q9UBD9 LINC02412-201ENST00000552584 1269 ntTSL 5 BASIC5.12□□□□□ -1.59
CLCF1Q9UBD9 LINC02307-201ENST00000553827 257 ntTSL 3 BASIC5.12□□□□□ -1.59
CLCF1Q9UBD9 LINC02319-201ENST00000555852 349 ntTSL 3 BASIC5.12□□□□□ -1.59
CLCF1Q9UBD9 AL049872.1-201ENST00000556323 322 ntBASIC5.12□□□□□ -1.59
CLCF1Q9UBD9 AC026992.1-201ENST00000558269 571 ntTSL 2 BASIC5.12□□□□□ -1.59
CLCF1Q9UBD9 AC006115.2-201ENST00000596823 202 ntBASIC5.12□□□□□ -1.59
CLCF1Q9UBD9 AC063977.5-201ENST00000601044 974 ntBASIC5.12□□□□□ -1.59
CLCF1Q9UBD9 AL589674.2-201ENST00000604304 337 ntBASIC5.12□□□□□ -1.59
CLCF1Q9UBD9 PROX1-AS1-219ENST00000610094 791 ntTSL 5 BASIC5.12□□□□□ -1.59
CLCF1Q9UBD9 AL031658.2-201ENST00000616850 651 ntBASIC5.12□□□□□ -1.59
CLCF1Q9UBD9 AC069234.4-201ENST00000621276 412 ntBASIC5.12□□□□□ -1.59
CLCF1Q9UBD9 AC079298.3-203ENST00000623269 555 ntTSL 3 BASIC5.12□□□□□ -1.59
CLCF1Q9UBD9 AL691477.1-201ENST00000624398 162 ntBASIC5.12□□□□□ -1.59
CLCF1Q9UBD9 AC002429.2-202ENST00000637269 394 ntAPPRIS P1 TSL 3 BASIC5.12□□□□□ -1.59
CLCF1Q9UBD9 MMP13-201ENST00000260302 2716 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
CLCF1Q9UBD9 GTF2IP4-201ENST00000453092 2054 ntBASIC5.12□□□□□ -1.59
CLCF1Q9UBD9 CCDC169-204ENST00000379864 5944 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
CLCF1Q9UBD9 AC005225.5-201ENST00000623547 2225 ntBASIC5.12□□□□□ -1.59
CLCF1Q9UBD9 MTRNR2L3-201ENST00000543500 1539 ntAPPRIS P1 BASIC5.12□□□□□ -1.59
CLCF1Q9UBD9 POLR1D-218ENST00000636817 4592 ntTSL 5 BASIC5.12□□□□□ -1.59
CLCF1Q9UBD9 VCAM1-201ENST00000294728 3083 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
CLCF1Q9UBD9 NRDC-213ENST00000539524 3417 ntAPPRIS ALT2 TSL 1 (best) BASIC5.11□□□□□ -1.59
CLCF1Q9UBD9 AIMP1-202ENST00000394701 2586 ntAPPRIS ALT2 TSL 1 (best) BASIC5.11□□□□□ -1.59
CLCF1Q9UBD9 CLUL1-205ENST00000579494 1742 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
CLCF1Q9UBD9 LINC01091-203ENST00000514823 5262 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
CLCF1Q9UBD9 TCF7L2-222ENST00000627217 3680 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
CLCF1Q9UBD9 TCF4-268ENST00000629387 3789 ntAPPRIS ALT1 TSL 5 BASIC5.11□□□□□ -1.59
CLCF1Q9UBD9 NRCAM-210ENST00000425651 3915 ntAPPRIS ALT2 TSL 1 (best) BASIC5.11□□□□□ -1.59
CLCF1Q9UBD9 SMAP1-206ENST00000619054 3150 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
CLCF1Q9UBD9 MRE11P1-201ENST00000464884 2127 ntBASIC5.11□□□□□ -1.59
CLCF1Q9UBD9 ADGRF5-201ENST00000265417 5668 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
CLCF1Q9UBD9 CLIP4-202ENST00000401605 2322 ntTSL 2 BASIC5.11□□□□□ -1.59
CLCF1Q9UBD9 CPS1-IT1-201ENST00000628368 2306 ntBASIC5.11□□□□□ -1.59
CLCF1Q9UBD9 OR11H1-201ENST00000252835 982 ntAPPRIS P1 BASIC5.11□□□□□ -1.59
CLCF1Q9UBD9 C1orf162-201ENST00000343534 1107 ntAPPRIS P3 TSL 1 (best) BASIC5.11□□□□□ -1.59
CLCF1Q9UBD9 RNA5SP30-201ENST00000365552 115 ntBASIC5.11□□□□□ -1.59
CLCF1Q9UBD9 AL391422.1-201ENST00000402155 436 ntBASIC5.11□□□□□ -1.59
CLCF1Q9UBD9 AL157834.1-201ENST00000422744 420 ntTSL 3 BASIC5.11□□□□□ -1.59
CLCF1Q9UBD9 OR5W1P-201ENST00000423705 938 ntBASIC5.11□□□□□ -1.59
CLCF1Q9UBD9 NPM1P25-201ENST00000429734 854 ntBASIC5.11□□□□□ -1.59
CLCF1Q9UBD9 FMO7P-201ENST00000436045 768 ntBASIC5.11□□□□□ -1.59
CLCF1Q9UBD9 OR7E116P-201ENST00000448529 957 ntBASIC5.11□□□□□ -1.59
CLCF1Q9UBD9 OSTCP1-201ENST00000455507 450 ntBASIC5.11□□□□□ -1.59
CLCF1Q9UBD9 SLC25A51P1-201ENST00000468432 871 ntBASIC5.11□□□□□ -1.59
CLCF1Q9UBD9 AC068633.1-202ENST00000476460 458 ntTSL 2 BASIC5.11□□□□□ -1.59
CLCF1Q9UBD9 GCSAM-204ENST00000484193 1036 ntAPPRIS ALT1 TSL 2 BASIC5.11□□□□□ -1.59
CLCF1Q9UBD9 AC034238.3-201ENST00000512349 591 ntTSL 4 BASIC5.11□□□□□ -1.59
CLCF1Q9UBD9 AP005436.1-201ENST00000531454 488 ntTSL 2 BASIC5.11□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 125.4 ms