Protein–RNA interactions for Protein: Q9BUN5

CCDC28B, Coiled-coil domain-containing protein 28B, humanhuman

Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC28BQ9BUN5 LINC00518-204ENST00000491317 1228 ntTSL 2 BASIC5.57□□□□□ -1.52
CCDC28BQ9BUN5 LINC02360-201ENST00000506195 657 ntTSL 3 BASIC5.57□□□□□ -1.52
CCDC28BQ9BUN5 AC018680.1-201ENST00000513332 875 ntTSL 3 BASIC5.57□□□□□ -1.52
CCDC28BQ9BUN5 AC113423.2-201ENST00000517582 545 ntTSL 2 BASIC5.57□□□□□ -1.52
CCDC28BQ9BUN5 LINC01484-201ENST00000517733 555 ntTSL 4 BASIC5.57□□□□□ -1.52
CCDC28BQ9BUN5 AP004607.5-201ENST00000532034 217 ntBASIC5.57□□□□□ -1.52
CCDC28BQ9BUN5 C3orf14-207ENST00000542214 768 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
CCDC28BQ9BUN5 TCEANC-205ENST00000544987 1146 ntTSL 5 BASIC5.57□□□□□ -1.52
CCDC28BQ9BUN5 AL133240.1-201ENST00000553537 580 ntTSL 4 BASIC5.57□□□□□ -1.52
CCDC28BQ9BUN5 AC091078.2-201ENST00000557145 559 ntBASIC5.57□□□□□ -1.52
CCDC28BQ9BUN5 AC010401.2-202ENST00000570663 396 ntTSL 2 BASIC5.57□□□□□ -1.52
CCDC28BQ9BUN5 DHFRP1-201ENST00000579682 559 ntBASIC5.57□□□□□ -1.52
CCDC28BQ9BUN5 TTC39C-AS1-201ENST00000579713 817 ntTSL 5 BASIC5.57□□□□□ -1.52
CCDC28BQ9BUN5 AC127024.5-201ENST00000580085 462 ntBASIC5.57□□□□□ -1.52
CCDC28BQ9BUN5 MIR4701-201ENST00000583094 63 ntBASIC5.57□□□□□ -1.52
CCDC28BQ9BUN5 AC025809.1-201ENST00000585336 560 ntTSL 4 BASIC5.57□□□□□ -1.52
CCDC28BQ9BUN5 ZNF137P-202ENST00000597158 308 ntTSL 3 BASIC5.57□□□□□ -1.52
CCDC28BQ9BUN5 Z93930.3-201ENST00000607919 749 ntBASIC5.57□□□□□ -1.52
CCDC28BQ9BUN5 SSX9-202ENST00000608568 580 ntTSL 4 BASIC5.57□□□□□ -1.52
CCDC28BQ9BUN5 AL021918.2-201ENST00000613415 194 ntBASIC5.57□□□□□ -1.52
CCDC28BQ9BUN5 NEK3-211ENST00000629912 141 ntTSL 5 BASIC5.57□□□□□ -1.52
CCDC28BQ9BUN5 SPTY2D1-AS1-206ENST00000636011 853 ntAPPRIS ALT2 TSL 5 BASIC5.57□□□□□ -1.52
CCDC28BQ9BUN5 OR8J3-204ENST00000642058 3806 ntAPPRIS P1 BASIC5.57□□□□□ -1.52
CCDC28BQ9BUN5 USP15-201ENST00000280377 4748 ntAPPRIS ALT1 TSL 1 (best) BASIC5.57□□□□□ -1.52
CCDC28BQ9BUN5 MGC4859-201ENST00000634803 3118 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
CCDC28BQ9BUN5 MYBPC1-216ENST00000550270 3426 ntAPPRIS ALT2 TSL 5 BASIC5.57□□□□□ -1.52
CCDC28BQ9BUN5 DOCK10-202ENST00000409592 7288 ntAPPRIS ALT2 TSL 1 (best) BASIC5.57□□□□□ -1.52
CCDC28BQ9BUN5 LIPF-201ENST00000238983 1376 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
CCDC28BQ9BUN5 Z94721.2-201ENST00000609590 5310 ntTSL 2 BASIC5.56□□□□□ -1.52
CCDC28BQ9BUN5 CTAGE5-208ENST00000553352 3441 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
CCDC28BQ9BUN5 AC245100.4-204ENST00000635587 1555 ntTSL 5 BASIC5.56□□□□□ -1.52
CCDC28BQ9BUN5 SCN11A-202ENST00000444237 5729 ntAPPRIS ALT2 TSL 5 BASIC5.56□□□□□ -1.52
CCDC28BQ9BUN5 TAS2R16-201ENST00000249284 997 ntAPPRIS P1 BASIC5.56□□□□□ -1.52
CCDC28BQ9BUN5 DPH5-201ENST00000342173 1143 ntAPPRIS ALT1 TSL 1 (best) BASIC5.56□□□□□ -1.52
CCDC28BQ9BUN5 S100A5-201ENST00000368717 506 ntAPPRIS P1 TSL 3 BASIC5.56□□□□□ -1.52
CCDC28BQ9BUN5 OR2J2-202ENST00000377167 1272 ntAPPRIS P1 BASIC5.56□□□□□ -1.52
CCDC28BQ9BUN5 U3.28-201ENST00000391249 210 ntBASIC5.56□□□□□ -1.52
CCDC28BQ9BUN5 AC005042.1-201ENST00000393397 800 ntBASIC5.56□□□□□ -1.52
CCDC28BQ9BUN5 RNA5SP198-201ENST00000410376 127 ntBASIC5.56□□□□□ -1.52
CCDC28BQ9BUN5 AC087380.1-202ENST00000415970 1163 ntTSL 2 BASIC5.56□□□□□ -1.52
CCDC28BQ9BUN5 AL031846.1-202ENST00000424436 592 ntTSL 2 BASIC5.56□□□□□ -1.52
CCDC28BQ9BUN5 AL158832.1-201ENST00000429661 406 ntTSL 3 BASIC5.56□□□□□ -1.52
CCDC28BQ9BUN5 RPL34P6-201ENST00000432390 345 ntBASIC5.56□□□□□ -1.52
CCDC28BQ9BUN5 DEFA9P-201ENST00000433042 285 ntBASIC5.56□□□□□ -1.52
CCDC28BQ9BUN5 LINC01798-204ENST00000433396 682 ntTSL 3 BASIC5.56□□□□□ -1.52
CCDC28BQ9BUN5 NDUFB4P8-201ENST00000435351 367 ntBASIC5.56□□□□□ -1.52
CCDC28BQ9BUN5 AC009518.1-201ENST00000452219 559 ntTSL 4 BASIC5.56□□□□□ -1.52
CCDC28BQ9BUN5 RN7SL269P-201ENST00000467795 305 ntBASIC5.56□□□□□ -1.52
CCDC28BQ9BUN5 LINC02215-201ENST00000503320 543 ntTSL 4 BASIC5.56□□□□□ -1.52
CCDC28BQ9BUN5 LINC02114-201ENST00000503757 801 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
CCDC28BQ9BUN5 AC131935.1-201ENST00000524621 333 ntBASIC5.56□□□□□ -1.52
CCDC28BQ9BUN5 FAU-203ENST00000525297 355 ntTSL 5 BASIC5.56□□□□□ -1.52
CCDC28BQ9BUN5 LINC02463-201ENST00000546414 497 ntTSL 3 BASIC5.56□□□□□ -1.52
CCDC28BQ9BUN5 PCED1B-AS1-203ENST00000547626 420 ntTSL 2 BASIC5.56□□□□□ -1.52
CCDC28BQ9BUN5 AC103996.3-201ENST00000553477 442 ntTSL 3 BASIC5.56□□□□□ -1.52
CCDC28BQ9BUN5 AC013652.2-202ENST00000558948 910 ntTSL 3 BASIC5.56□□□□□ -1.52
CCDC28BQ9BUN5 AC093591.2-201ENST00000565254 3843 ntBASIC5.56□□□□□ -1.52
CCDC28BQ9BUN5 AC233702.9-201ENST00000581528 203 ntBASIC5.56□□□□□ -1.52
CCDC28BQ9BUN5 MIR6736-201ENST00000616799 59 ntBASIC5.56□□□□□ -1.52
CCDC28BQ9BUN5 AC087821.1-201ENST00000623639 567 ntBASIC5.56□□□□□ -1.52
CCDC28BQ9BUN5 PCDHB2-203ENST00000624874 565 ntTSL 5 BASIC5.56□□□□□ -1.52
CCDC28BQ9BUN5 MRRF-208ENST00000394315 1501 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
CCDC28BQ9BUN5 LINC01689-201ENST00000416218 2007 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
CCDC28BQ9BUN5 FAM170B-AS1-203ENST00000442525 2000 ntTSL 2 BASIC5.56□□□□□ -1.52
CCDC28BQ9BUN5 CFL2-201ENST00000298159 6747 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
CCDC28BQ9BUN5 AKAP6-212ENST00000557272 4601 ntTSL 5 BASIC5.56□□□□□ -1.52
CCDC28BQ9BUN5 NXT2-201ENST00000218004 2692 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
CCDC28BQ9BUN5 CNGA1-202ENST00000402813 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC5.56□□□□□ -1.52
CCDC28BQ9BUN5 ZNF117-201ENST00000282869 9080 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
CCDC28BQ9BUN5 VWC2L-202ENST00000427124 4480 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
CCDC28BQ9BUN5 ZNF790-201ENST00000356725 3037 ntAPPRIS P1 TSL 2 BASIC5.56□□□□□ -1.52
CCDC28BQ9BUN5 CASC15-207ENST00000607048 1634 ntTSL 2 BASIC5.56□□□□□ -1.52
CCDC28BQ9BUN5 ZNF518B-201ENST00000326756 6894 ntAPPRIS P1 TSL 3 BASIC5.55□□□□□ -1.52
CCDC28BQ9BUN5 CASC19-248ENST00000641674 1356 ntBASIC5.55□□□□□ -1.52
CCDC28BQ9BUN5 AC021074.3-201ENST00000476385 1825 ntTSL 2 BASIC5.55□□□□□ -1.52
CCDC28BQ9BUN5 ANXA1-202ENST00000376911 2209 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
CCDC28BQ9BUN5 REP15-201ENST00000310791 1078 ntAPPRIS P1 BASIC5.55□□□□□ -1.52
CCDC28BQ9BUN5 OR4D11-201ENST00000313253 936 ntAPPRIS P1 BASIC5.55□□□□□ -1.52
CCDC28BQ9BUN5 OR2L2-201ENST00000366479 1134 ntAPPRIS P1 BASIC5.55□□□□□ -1.52
CCDC28BQ9BUN5 PSMA6P1-201ENST00000400275 741 ntBASIC5.55□□□□□ -1.52
CCDC28BQ9BUN5 BTBD9-203ENST00000403056 1155 ntTSL 5 BASIC5.55□□□□□ -1.52
CCDC28BQ9BUN5 CEACAM1-208ENST00000403461 1263 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
CCDC28BQ9BUN5 HSD17B7P1-201ENST00000412419 1017 ntBASIC5.55□□□□□ -1.52
CCDC28BQ9BUN5 AL512353.1-202ENST00000416809 627 ntTSL 3 BASIC5.55□□□□□ -1.52
CCDC28BQ9BUN5 VN1R20P-201ENST00000425215 966 ntBASIC5.55□□□□□ -1.52
CCDC28BQ9BUN5 TMEM183AP1-205ENST00000432739 290 ntBASIC5.55□□□□□ -1.52
CCDC28BQ9BUN5 MEOX2-AS1-201ENST00000442176 697 ntTSL 3 BASIC5.55□□□□□ -1.52
CCDC28BQ9BUN5 ZIC4-AS1-201ENST00000462168 268 ntTSL 5 BASIC5.55□□□□□ -1.52
CCDC28BQ9BUN5 RPS23P2-201ENST00000463671 415 ntBASIC5.55□□□□□ -1.52
CCDC28BQ9BUN5 PSAT1P4-201ENST00000466500 526 ntBASIC5.55□□□□□ -1.52
CCDC28BQ9BUN5 ATP5LP5-201ENST00000483050 299 ntBASIC5.55□□□□□ -1.52
CCDC28BQ9BUN5 AC010168.1-201ENST00000501178 657 ntTSL 3 BASIC5.55□□□□□ -1.52
CCDC28BQ9BUN5 CASC19-203ENST00000523510 575 ntTSL 3 BASIC5.55□□□□□ -1.52
CCDC28BQ9BUN5 AC122688.1-201ENST00000541494 223 ntBASIC5.55□□□□□ -1.52
CCDC28BQ9BUN5 AC078820.1-201ENST00000548702 742 ntTSL 3 BASIC5.55□□□□□ -1.52
CCDC28BQ9BUN5 ZNF682-208ENST00000596019 552 ntTSL 5 BASIC5.55□□□□□ -1.52
CCDC28BQ9BUN5 AC011891.2-201ENST00000604949 397 ntBASIC5.55□□□□□ -1.52
CCDC28BQ9BUN5 AL589182.1-201ENST00000611785 320 ntTSL 5 BASIC5.55□□□□□ -1.52
CCDC28BQ9BUN5 AC026367.3-201ENST00000619032 590 ntBASIC5.55□□□□□ -1.52
CCDC28BQ9BUN5 AC211486.4-201ENST00000621495 113 ntBASIC5.55□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 73.5 ms