Protein–RNA interactions for Protein: P58418

CLRN1, Clarin-1, humanhuman

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLRN1P58418 ELAVL4-202ENST00000371819 2467 ntAPPRIS ALT1 TSL 2 BASIC5.84□□□□□ -1.48
CLRN1P58418 MEF2C-254ENST00000637732 3347 ntTSL 5 BASIC5.84□□□□□ -1.48
CLRN1P58418 TPH1-201ENST00000250018 5325 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.48
CLRN1P58418 NME8-203ENST00000440017 1879 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
CLRN1P58418 AC016251.2-201ENST00000623393 3089 ntBASIC5.83□□□□□ -1.48
CLRN1P58418 MEIS1-201ENST00000272369 4291 ntAPPRIS P2 TSL 1 (best) BASIC5.83□□□□□ -1.48
CLRN1P58418 FOXP2-202ENST00000360232 1412 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
CLRN1P58418 AL133268.1-201ENST00000405676 1401 ntBASIC5.83□□□□□ -1.48
CLRN1P58418 CCAR1-201ENST00000265872 4683 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
CLRN1P58418 ARMCX5-202ENST00000372742 2647 ntAPPRIS P1 TSL 2 BASIC5.83□□□□□ -1.48
CLRN1P58418 BTN3A2-201ENST00000356386 3017 ntAPPRIS P3 TSL 5 BASIC5.83□□□□□ -1.48
CLRN1P58418 PTER-202ENST00000378000 3777 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
CLRN1P58418 THRB-IT1-201ENST00000425296 1754 ntTSL 2 BASIC5.83□□□□□ -1.48
CLRN1P58418 LRRC37A15P-201ENST00000514785 1355 ntBASIC5.83□□□□□ -1.48
CLRN1P58418 AL589993.1-201ENST00000407450 2524 ntBASIC5.83□□□□□ -1.48
CLRN1P58418 PPP1R11-201ENST00000376758 1723 ntTSL 2 BASIC5.83□□□□□ -1.48
CLRN1P58418 LINC01440-201ENST00000416190 1340 ntTSL 5 BASIC5.83□□□□□ -1.48
CLRN1P58418 AL121985.1-201ENST00000598917 1308 ntTSL 5 BASIC5.83□□□□□ -1.48
CLRN1P58418 ZC3H14-201ENST00000251038 18281 ntAPPRIS P3 TSL 1 (best) BASIC5.83□□□□□ -1.48
CLRN1P58418 BTK-209ENST00000618050 2417 ntTSL 5 BASIC5.83□□□□□ -1.48
CLRN1P58418 NAPG-201ENST00000322897 3548 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
CLRN1P58418 SPHKAP-201ENST00000344657 6804 ntAPPRIS P3 TSL 1 (best) BASIC5.83□□□□□ -1.48
CLRN1P58418 GCNT2-201ENST00000265012 4214 ntAPPRIS P3 TSL 1 (best) BASIC5.83□□□□□ -1.48
CLRN1P58418 GSTA5-201ENST00000284562 845 ntAPPRIS P1 TSL 5 BASIC5.83□□□□□ -1.48
CLRN1P58418 OR7G2-201ENST00000305456 1038 ntAPPRIS P2 BASIC5.83□□□□□ -1.48
CLRN1P58418 OR4D11-201ENST00000313253 936 ntAPPRIS P1 BASIC5.83□□□□□ -1.48
CLRN1P58418 SULT1C3-201ENST00000329106 915 ntAPPRIS P1 TSL 2 BASIC5.83□□□□□ -1.48
CLRN1P58418 ARGFX-201ENST00000334384 992 ntAPPRIS P1 TSL 3 BASIC5.83□□□□□ -1.48
CLRN1P58418 SEC61G-201ENST00000352861 462 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
CLRN1P58418 RNA5SP350-201ENST00000363298 111 ntBASIC5.83□□□□□ -1.48
CLRN1P58418 SNRPE-201ENST00000367208 355 ntTSL 2 BASIC5.83□□□□□ -1.48
CLRN1P58418 AC019178.1-201ENST00000392337 440 ntBASIC5.83□□□□□ -1.48
CLRN1P58418 TP63-205ENST00000392461 1251 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
CLRN1P58418 AL356131.1-201ENST00000405826 414 ntBASIC5.83□□□□□ -1.48
CLRN1P58418 AC084816.1-201ENST00000413794 565 ntTSL 4 BASIC5.83□□□□□ -1.48
CLRN1P58418 AC093157.2-201ENST00000414686 671 ntTSL 5 BASIC5.83□□□□□ -1.48
CLRN1P58418 AL359092.1-201ENST00000417156 265 ntBASIC5.83□□□□□ -1.48
CLRN1P58418 AL356320.2-201ENST00000417263 507 ntBASIC5.83□□□□□ -1.48
CLRN1P58418 AC006065.1-201ENST00000422539 802 ntBASIC5.83□□□□□ -1.48
CLRN1P58418 AL353148.1-202ENST00000424701 551 ntTSL 2 BASIC5.83□□□□□ -1.48
CLRN1P58418 AL365396.1-201ENST00000430854 671 ntBASIC5.83□□□□□ -1.48
CLRN1P58418 OR6R1P-201ENST00000431838 940 ntBASIC5.83□□□□□ -1.48
CLRN1P58418 AC003989.1-201ENST00000434569 565 ntBASIC5.83□□□□□ -1.48
CLRN1P58418 AL589935.1-218ENST00000434683 529 ntTSL 3 BASIC5.83□□□□□ -1.48
CLRN1P58418 HSFY3P-201ENST00000444242 1191 ntBASIC5.83□□□□□ -1.48
CLRN1P58418 BCAP29-207ENST00000445771 1157 ntTSL 5 BASIC5.83□□□□□ -1.48
CLRN1P58418 AC013476.1-201ENST00000446709 537 ntTSL 4 BASIC5.83□□□□□ -1.48
CLRN1P58418 MTND6P5-201ENST00000448266 512 ntBASIC5.83□□□□□ -1.48
CLRN1P58418 AL121578.2-201ENST00000448797 447 ntBASIC5.83□□□□□ -1.48
CLRN1P58418 TPTE2P6-203ENST00000450973 649 ntTSL 5 BASIC5.83□□□□□ -1.48
CLRN1P58418 AL133217.1-201ENST00000450980 425 ntBASIC5.83□□□□□ -1.48
CLRN1P58418 AC010890.1-201ENST00000454699 469 ntTSL 4 BASIC5.83□□□□□ -1.48
CLRN1P58418 AL138737.1-201ENST00000456896 1252 ntTSL 5 BASIC5.83□□□□□ -1.48
CLRN1P58418 RPL7P32-201ENST00000457119 744 ntBASIC5.83□□□□□ -1.48
CLRN1P58418 RPSAP24-201ENST00000461543 873 ntBASIC5.83□□□□□ -1.48
CLRN1P58418 AC107398.1-201ENST00000486904 505 ntBASIC5.83□□□□□ -1.48
CLRN1P58418 SNORA31.13-201ENST00000516624 135 ntBASIC5.83□□□□□ -1.48
CLRN1P58418 AC110011.1-201ENST00000518260 582 ntTSL 3 BASIC5.83□□□□□ -1.48
CLRN1P58418 AC099805.1-205ENST00000521794 837 ntTSL 2 BASIC5.83□□□□□ -1.48
CLRN1P58418 AC008662.1-201ENST00000521805 674 ntTSL 3 BASIC5.83□□□□□ -1.48
CLRN1P58418 AC013701.1-201ENST00000522657 465 ntBASIC5.83□□□□□ -1.48
CLRN1P58418 AC090819.1-201ENST00000523800 1111 ntBASIC5.83□□□□□ -1.48
CLRN1P58418 AC027369.2-201ENST00000528030 440 ntBASIC5.83□□□□□ -1.48
CLRN1P58418 AL138974.1-201ENST00000551227 741 ntTSL 5 BASIC5.83□□□□□ -1.48
CLRN1P58418 LINC02170-201ENST00000561519 555 ntTSL 4 BASIC5.83□□□□□ -1.48
CLRN1P58418 AC040977.1-201ENST00000573222 343 ntTSL 3 BASIC5.83□□□□□ -1.48
CLRN1P58418 AC040963.1-201ENST00000591900 564 ntTSL 4 BASIC5.83□□□□□ -1.48
CLRN1P58418 AL683813.2-201ENST00000605245 502 ntBASIC5.83□□□□□ -1.48
CLRN1P58418 AC067838.1-201ENST00000606064 577 ntBASIC5.83□□□□□ -1.48
CLRN1P58418 AL513218.1-201ENST00000606527 391 ntBASIC5.83□□□□□ -1.48
CLRN1P58418 LAMTOR5-AS1-227ENST00000609653 457 ntTSL 2 BASIC5.83□□□□□ -1.48
CLRN1P58418 AL360219.1-201ENST00000610230 366 ntBASIC5.83□□□□□ -1.48
CLRN1P58418 AC096586.1-201ENST00000610267 561 ntBASIC5.83□□□□□ -1.48
CLRN1P58418 TUSC7.1-201ENST00000610969 165 ntBASIC5.83□□□□□ -1.48
CLRN1P58418 U1.41-201ENST00000617626 165 ntBASIC5.83□□□□□ -1.48
CLRN1P58418 Metazoa_SRP.81-201ENST00000618466 316 ntBASIC5.83□□□□□ -1.48
CLRN1P58418 AC244517.6-202ENST00000623884 566 ntAPPRIS P1 TSL 4 BASIC5.83□□□□□ -1.48
CLRN1P58418 LINC01338-201ENST00000627179 632 ntTSL 3 BASIC5.83□□□□□ -1.48
CLRN1P58418 AL132640.3-201ENST00000630473 177 ntBASIC5.83□□□□□ -1.48
CLRN1P58418 CCDC195-201ENST00000638102 606 ntAPPRIS P1 TSL 5 BASIC5.83□□□□□ -1.48
CLRN1P58418 GLYATL1P1-201ENST00000528297 1607 ntBASIC5.83□□□□□ -1.48
CLRN1P58418 CAMK2D-202ENST00000342666 1940 ntTSL 5 BASIC5.83□□□□□ -1.48
CLRN1P58418 LINC00560-201ENST00000564593 1599 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
CLRN1P58418 AL669831.5-218ENST00000591702 1873 ntBASIC5.83□□□□□ -1.48
CLRN1P58418 OPALIN-201ENST00000371172 3557 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
CLRN1P58418 FAM13A-AS1-201ENST00000500765 3210 ntTSL 2 BASIC5.83□□□□□ -1.48
CLRN1P58418 AC006600.2-201ENST00000624834 2506 ntBASIC5.83□□□□□ -1.48
CLRN1P58418 PRRC1-204ENST00000512635 2726 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
CLRN1P58418 PRKDC-202ENST00000338368 12784 ntAPPRIS ALT2 TSL 1 (best) BASIC5.82□□□□□ -1.48
CLRN1P58418 SMG1P5-202ENST00000529428 4219 ntBASIC5.82□□□□□ -1.48
CLRN1P58418 SMG1P2-201ENST00000566127 4221 ntBASIC5.82□□□□□ -1.48
CLRN1P58418 ICE2-201ENST00000261520 7209 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
CLRN1P58418 NFIA-201ENST00000357977 3200 ntTSL 2 BASIC5.82□□□□□ -1.48
CLRN1P58418 SEPT7-AS1-203ENST00000437235 3810 ntTSL 5 BASIC5.82□□□□□ -1.48
CLRN1P58418 AC003973.2-201ENST00000596778 1394 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
CLRN1P58418 AC010624.4-201ENST00000597606 1351 ntBASIC5.82□□□□□ -1.48
CLRN1P58418 AJ009632.2-208ENST00000635525 4123 ntTSL 5 BASIC5.82□□□□□ -1.48
CLRN1P58418 KCNJ1-203ENST00000392664 1674 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
CLRN1P58418 UGT2A2-202ENST00000604629 1676 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
CLRN1P58418 C17orf78-203ENST00000611038 1675 ntAPPRIS ALT2 TSL 2 BASIC5.82□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 154.7 ms