Protein–RNA interactions for Protein: P51790

CLCN3, H(+)/Cl(-) exchange transporter 3, humanhuman

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3P51790 Z68694.1-201ENST00000413929 841 ntBASIC6.32□□□□□ -1.4
CLCN3P51790 AC113412.1-201ENST00000425840 504 ntBASIC6.32□□□□□ -1.4
CLCN3P51790 LINC01506-201ENST00000432148 495 ntTSL 2 BASIC6.32□□□□□ -1.4
CLCN3P51790 AL365220.1-201ENST00000432923 399 ntBASIC6.32□□□□□ -1.4
CLCN3P51790 AC096775.1-201ENST00000437724 448 ntBASIC6.32□□□□□ -1.4
CLCN3P51790 LINC01133-202ENST00000443364 1266 ntTSL 5 BASIC6.32□□□□□ -1.4
CLCN3P51790 OR7E116P-201ENST00000448529 957 ntBASIC6.32□□□□□ -1.4
CLCN3P51790 AC105021.1-201ENST00000455347 590 ntTSL 3 BASIC6.32□□□□□ -1.4
CLCN3P51790 AC090589.1-201ENST00000473109 362 ntBASIC6.32□□□□□ -1.4
CLCN3P51790 AC087672.1-201ENST00000479876 766 ntBASIC6.32□□□□□ -1.4
CLCN3P51790 TRBV5-2-201ENST00000489095 273 ntBASIC6.32□□□□□ -1.4
CLCN3P51790 NSMCE2-210ENST00000522563 1037 ntAPPRIS P1 TSL 5 BASIC6.32□□□□□ -1.4
CLCN3P51790 AC025370.1-201ENST00000523775 583 ntTSL 5 BASIC6.32□□□□□ -1.4
CLCN3P51790 AC027026.1-201ENST00000532323 742 ntBASIC6.32□□□□□ -1.4
CLCN3P51790 AC090109.1-201ENST00000548885 819 ntTSL 3 BASIC6.32□□□□□ -1.4
CLCN3P51790 AL157756.1-203ENST00000553269 600 ntTSL 3 BASIC6.32□□□□□ -1.4
CLCN3P51790 AC087286.2-201ENST00000558980 660 ntTSL 3 BASIC6.32□□□□□ -1.4
CLCN3P51790 AC007225.2-201ENST00000562529 256 ntBASIC6.32□□□□□ -1.4
CLCN3P51790 PWRN1-204ENST00000565241 480 ntTSL 2 BASIC6.32□□□□□ -1.4
CLCN3P51790 C16orf52-205ENST00000567004 951 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
CLCN3P51790 ZNF667-AS1-207ENST00000592146 668 ntTSL 5 BASIC6.32□□□□□ -1.4
CLCN3P51790 GMFG-212ENST00000602185 423 ntTSL 3 BASIC6.32□□□□□ -1.4
CLCN3P51790 AP000864.1-201ENST00000609424 650 ntBASIC6.32□□□□□ -1.4
CLCN3P51790 AC079395.2-201ENST00000610982 737 ntBASIC6.32□□□□□ -1.4
CLCN3P51790 AC069234.4-201ENST00000621276 412 ntBASIC6.32□□□□□ -1.4
CLCN3P51790 SEC22A-201ENST00000309934 4228 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
CLCN3P51790 MPP5-204ENST00000555925 5006 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
CLCN3P51790 ZNF724-201ENST00000418100 2764 ntAPPRIS P1 TSL 2 BASIC6.32□□□□□ -1.4
CLCN3P51790 DAZ2-204ENST00000382431 3637 ntAPPRIS ALT2 TSL 1 (best) BASIC6.32□□□□□ -1.4
CLCN3P51790 ZNF721-201ENST00000338977 4492 ntTSL 2 BASIC6.32□□□□□ -1.4
CLCN3P51790 TLR6-201ENST00000381950 2938 ntAPPRIS P1 BASIC6.32□□□□□ -1.4
CLCN3P51790 ASNS-209ENST00000444334 1812 ntTSL 2 BASIC6.32□□□□□ -1.4
CLCN3P51790 LINC00906-206ENST00000589921 3444 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
CLCN3P51790 RBMS2-201ENST00000262031 8382 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
CLCN3P51790 LRRC7-203ENST00000370958 2375 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
CLCN3P51790 AC117409.1-201ENST00000470499 1310 ntBASIC6.31□□□□□ -1.4
CLCN3P51790 DCDC1-207ENST00000452803 1706 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
CLCN3P51790 FCGR3B-208ENST00000613418 2251 ntTSL 5 BASIC6.31□□□□□ -1.4
CLCN3P51790 GRAMD1C-208ENST00000472026 1876 ntTSL 2 BASIC6.31□□□□□ -1.4
CLCN3P51790 SPATA4-201ENST00000280191 1169 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
CLCN3P51790 RNA5SP131-201ENST00000365452 119 ntBASIC6.31□□□□□ -1.4
CLCN3P51790 RNA5SP30-201ENST00000365552 115 ntBASIC6.31□□□□□ -1.4
CLCN3P51790 APOOL-201ENST00000373173 1279 ntAPPRIS P2 TSL 1 (best) BASIC6.31□□□□□ -1.4
CLCN3P51790 AC073257.2-201ENST00000413991 528 ntTSL 3 BASIC6.31□□□□□ -1.4
CLCN3P51790 NENFP1-201ENST00000419476 466 ntBASIC6.31□□□□□ -1.4
CLCN3P51790 AL021153.1-201ENST00000427360 308 ntTSL 3 BASIC6.31□□□□□ -1.4
CLCN3P51790 AL353693.1-201ENST00000429567 442 ntTSL 3 BASIC6.31□□□□□ -1.4
CLCN3P51790 ALG13-AS1-201ENST00000430794 195 ntTSL 5 BASIC6.31□□□□□ -1.4
CLCN3P51790 LINC01911-201ENST00000450667 806 ntTSL 5 BASIC6.31□□□□□ -1.4
CLCN3P51790 AP000547.1-201ENST00000454360 617 ntBASIC6.31□□□□□ -1.4
CLCN3P51790 OSTCP1-201ENST00000455507 450 ntBASIC6.31□□□□□ -1.4
CLCN3P51790 PHC3-208ENST00000481639 1075 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
CLCN3P51790 AC112184.1-201ENST00000505179 312 ntBASIC6.31□□□□□ -1.4
CLCN3P51790 LINC02505-202ENST00000510597 776 ntTSL 3 BASIC6.31□□□□□ -1.4
CLCN3P51790 LINC02055-205ENST00000521090 774 ntTSL 3 BASIC6.31□□□□□ -1.4
CLCN3P51790 AC091819.2-201ENST00000522292 490 ntTSL 3 BASIC6.31□□□□□ -1.4
CLCN3P51790 HDAC2-AS2-217ENST00000523087 493 ntTSL 3 BASIC6.31□□□□□ -1.4
CLCN3P51790 HNRNPRP2-201ENST00000528421 743 ntBASIC6.31□□□□□ -1.4
CLCN3P51790 GPRC5D-AS1-208ENST00000545914 566 ntTSL 3 BASIC6.31□□□□□ -1.4
CLCN3P51790 OR9A4-201ENST00000548136 1093 ntAPPRIS P1 BASIC6.31□□□□□ -1.4
CLCN3P51790 AC091544.7-201ENST00000554000 240 ntTSL 3 BASIC6.31□□□□□ -1.4
CLCN3P51790 AC113208.4-201ENST00000563568 206 ntTSL 3 BASIC6.31□□□□□ -1.4
CLCN3P51790 AP000919.1-201ENST00000582850 985 ntBASIC6.31□□□□□ -1.4
CLCN3P51790 AC105094.2-202ENST00000590968 566 ntTSL 2 BASIC6.31□□□□□ -1.4
CLCN3P51790 AC138473.1-201ENST00000605717 526 ntBASIC6.31□□□□□ -1.4
CLCN3P51790 OR2L8-201ENST00000623922 939 ntAPPRIS P1 BASIC6.31□□□□□ -1.4
CLCN3P51790 MTCO1P1-201ENST00000624263 1081 ntBASIC6.31□□□□□ -1.4
CLCN3P51790 AC007683.2-201ENST00000624681 714 ntBASIC6.31□□□□□ -1.4
CLCN3P51790 MVP-219ENST00000629059 120 ntTSL 5 BASIC6.31□□□□□ -1.4
CLCN3P51790 AC002429.2-202ENST00000637269 394 ntAPPRIS P1 TSL 3 BASIC6.31□□□□□ -1.4
CLCN3P51790 ENPP3-203ENST00000414305 3418 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
CLCN3P51790 MNS1-201ENST00000260453 2023 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
CLCN3P51790 AC113146.2-201ENST00000560743 1961 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
CLCN3P51790 TTC37-201ENST00000358746 5706 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
CLCN3P51790 LINC01422-201ENST00000434868 6043 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
CLCN3P51790 ABCA11P-202ENST00000504019 2110 ntBASIC6.31□□□□□ -1.4
CLCN3P51790 STRBP-204ENST00000447404 6161 ntAPPRIS P1 TSL 2 BASIC6.31□□□□□ -1.4
CLCN3P51790 AFP-201ENST00000226359 1914 ntTSL 5 BASIC6.31□□□□□ -1.4
CLCN3P51790 ZNF215-205ENST00000529903 1396 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
CLCN3P51790 CEP128-202ENST00000281129 4461 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
CLCN3P51790 IFIT2-201ENST00000371826 3489 ntAPPRIS P2 TSL 1 (best) BASIC6.3□□□□□ -1.4
CLCN3P51790 AXDND1-201ENST00000367618 3642 ntAPPRIS P2 TSL 1 (best) BASIC6.3□□□□□ -1.4
CLCN3P51790 TRIP12-204ENST00000389045 5355 ntAPPRIS ALT2 TSL 1 (best) BASIC6.3□□□□□ -1.4
CLCN3P51790 SLAMF6-202ENST00000368057 2712 ntAPPRIS ALT2 TSL 1 (best) BASIC6.3□□□□□ -1.4
CLCN3P51790 AC068389.1-202ENST00000526470 3564 ntTSL 2 BASIC6.3□□□□□ -1.4
CLCN3P51790 DLG1-213ENST00000443183 2516 ntTSL 2 BASIC6.3□□□□□ -1.4
CLCN3P51790 CEPT1-211ENST00000615636 1966 ntTSL 5 BASIC6.3□□□□□ -1.4
CLCN3P51790 SLC7A11-201ENST00000280612 9645 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
CLCN3P51790 SCAPER-207ENST00000563290 5028 ntAPPRIS P1 TSL 5 BASIC6.3□□□□□ -1.4
CLCN3P51790 OR14A2-201ENST00000366485 945 ntAPPRIS P1 BASIC6.3□□□□□ -1.4
CLCN3P51790 AL391422.1-201ENST00000402155 436 ntBASIC6.3□□□□□ -1.4
CLCN3P51790 KCNJ13-202ENST00000409779 1099 ntTSL 2 BASIC6.3□□□□□ -1.4
CLCN3P51790 RPS6P23-201ENST00000413224 722 ntBASIC6.3□□□□□ -1.4
CLCN3P51790 BX510359.3-201ENST00000422168 306 ntBASIC6.3□□□□□ -1.4
CLCN3P51790 Z99289.1-206ENST00000425503 393 ntTSL 3 BASIC6.3□□□□□ -1.4
CLCN3P51790 AC107057.1-201ENST00000425763 319 ntTSL 3 BASIC6.3□□□□□ -1.4
CLCN3P51790 RPS3AP38-201ENST00000435889 763 ntBASIC6.3□□□□□ -1.4
CLCN3P51790 AL162385.2-201ENST00000437864 285 ntTSL 3 BASIC6.3□□□□□ -1.4
CLCN3P51790 OR52Y1P-201ENST00000452418 828 ntBASIC6.3□□□□□ -1.4
CLCN3P51790 LINC02541-202ENST00000452675 465 ntTSL 5 BASIC6.3□□□□□ -1.4
Retrieved 100 of 98,524 protein–RNA pairs in 78.5 ms