Protein–RNA interactions for Protein: P41235

HNF4A, Hepatocyte nuclear factor 4-alpha, humanhuman

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HNF4AP41235 AC107977.1-201ENST00000355745 939 ntBASIC5.78□□□□□ -1.48
HNF4AP41235 DSCR8-201ENST00000357704 552 ntAPPRIS P5 TSL 2 BASIC5.78□□□□□ -1.48
HNF4AP41235 RNU1-146P-201ENST00000364015 165 ntBASIC5.78□□□□□ -1.48
HNF4AP41235 IFNB1-201ENST00000380232 859 ntAPPRIS P1 BASIC5.78□□□□□ -1.48
HNF4AP41235 MIR130B-202ENST00000385018 82 ntBASIC5.78□□□□□ -1.48
HNF4AP41235 KRTAP3-1-201ENST00000391588 594 ntAPPRIS P1 BASIC5.78□□□□□ -1.48
HNF4AP41235 DSCR8-202ENST00000400477 534 ntAPPRIS ALT2 TSL 1 (best) BASIC5.78□□□□□ -1.48
HNF4AP41235 RNASE9-202ENST00000404716 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC5.78□□□□□ -1.48
HNF4AP41235 AC099535.1-201ENST00000408928 371 ntBASIC5.78□□□□□ -1.48
HNF4AP41235 GAS5-202ENST00000414075 413 ntTSL 2 BASIC5.78□□□□□ -1.48
HNF4AP41235 AC096669.1-201ENST00000422203 648 ntTSL 5 BASIC5.78□□□□□ -1.48
HNF4AP41235 AL162408.1-201ENST00000428853 433 ntTSL 5 BASIC5.78□□□□□ -1.48
HNF4AP41235 RPL12P16-201ENST00000431098 498 ntBASIC5.78□□□□□ -1.48
HNF4AP41235 AL359636.1-201ENST00000433572 522 ntTSL 3 BASIC5.78□□□□□ -1.48
HNF4AP41235 AC073410.1-201ENST00000435125 589 ntBASIC5.78□□□□□ -1.48
HNF4AP41235 RPS3AP38-201ENST00000435889 763 ntBASIC5.78□□□□□ -1.48
HNF4AP41235 RPL5P10-201ENST00000445207 894 ntBASIC5.78□□□□□ -1.48
HNF4AP41235 GNL2P1-201ENST00000451274 2190 ntBASIC5.78□□□□□ -1.48
HNF4AP41235 AKR1C2-203ENST00000455190 1098 ntTSL 2 BASIC5.78□□□□□ -1.48
HNF4AP41235 AC104164.1-201ENST00000460282 590 ntBASIC5.78□□□□□ -1.48
HNF4AP41235 SYPL1-205ENST00000470347 1193 ntTSL 3 BASIC5.78□□□□□ -1.48
HNF4AP41235 OR9N1P-201ENST00000491296 333 ntBASIC5.78□□□□□ -1.48
HNF4AP41235 AC135457.1-201ENST00000503553 664 ntTSL 3 BASIC5.78□□□□□ -1.48
HNF4AP41235 AC091917.2-201ENST00000505002 744 ntBASIC5.78□□□□□ -1.48
HNF4AP41235 AC093225.1-201ENST00000506867 1408 ntBASIC5.78□□□□□ -1.48
HNF4AP41235 AC147055.1-201ENST00000509261 750 ntBASIC5.78□□□□□ -1.48
HNF4AP41235 HAND2-AS1-233ENST00000515345 797 ntTSL 3 BASIC5.78□□□□□ -1.48
HNF4AP41235 RN7SKP288-201ENST00000516227 268 ntBASIC5.78□□□□□ -1.48
HNF4AP41235 snoU109.5-201ENST00000516231 132 ntBASIC5.78□□□□□ -1.48
HNF4AP41235 AP003354.2-201ENST00000517983 563 ntTSL 4 BASIC5.78□□□□□ -1.48
HNF4AP41235 TAS2R46-201ENST00000533467 930 ntAPPRIS P1 BASIC5.78□□□□□ -1.48
HNF4AP41235 RNASE9-205ENST00000553706 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC5.78□□□□□ -1.48
HNF4AP41235 AC005703.3-201ENST00000579159 373 ntTSL 3 BASIC5.78□□□□□ -1.48
HNF4AP41235 AP000897.2-201ENST00000579509 1057 ntTSL 3 BASIC5.78□□□□□ -1.48
HNF4AP41235 FAM106CP-201ENST00000582212 507 ntBASIC5.78□□□□□ -1.48
HNF4AP41235 AC012370.2-201ENST00000597541 1080 ntTSL 5 BASIC5.78□□□□□ -1.48
HNF4AP41235 AC008750.7-201ENST00000600765 559 ntTSL 4 BASIC5.78□□□□□ -1.48
HNF4AP41235 AC135983.2-201ENST00000604301 628 ntTSL 5 BASIC5.78□□□□□ -1.48
HNF4AP41235 MIR7109-201ENST00000613748 65 ntBASIC5.78□□□□□ -1.48
HNF4AP41235 RBPJP2-201ENST00000618187 1444 ntBASIC5.78□□□□□ -1.48
HNF4AP41235 AL591926.1-201ENST00000620542 217 ntBASIC5.78□□□□□ -1.48
HNF4AP41235 AL355860.1-201ENST00000636087 1229 ntAPPRIS P1 TSL 2 BASIC5.78□□□□□ -1.48
HNF4AP41235 ESRRG-205ENST00000366937 5365 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
HNF4AP41235 PRLR-201ENST00000231423 1679 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
HNF4AP41235 PMS2-203ENST00000382321 1386 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
HNF4AP41235 AC130304.1-201ENST00000622942 2385 ntBASIC5.78□□□□□ -1.48
HNF4AP41235 DST-205ENST00000370765 8999 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
HNF4AP41235 HSPD1P9-201ENST00000420325 1636 ntBASIC5.77□□□□□ -1.48
HNF4AP41235 FBXO9-201ENST00000244426 4559 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
HNF4AP41235 USP7-202ENST00000381886 3587 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
HNF4AP41235 NLRP11-201ENST00000589093 3417 ntAPPRIS P2 TSL 1 (best) BASIC5.77□□□□□ -1.49
HNF4AP41235 RASSF8-216ENST00000615708 1328 ntTSL 5 BASIC5.77□□□□□ -1.49
HNF4AP41235 AC239868.2-201ENST00000564237 4527 ntBASIC5.77□□□□□ -1.49
HNF4AP41235 C1orf112-201ENST00000286031 4355 ntAPPRIS P3 TSL 1 (best) BASIC5.77□□□□□ -1.49
HNF4AP41235 AC008627.1-201ENST00000517511 1704 ntBASIC5.77□□□□□ -1.49
HNF4AP41235 INSL4-201ENST00000239316 1952 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
HNF4AP41235 CHMP1B2P-202ENST00000614414 6813 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
HNF4AP41235 C3orf67-209ENST00000482387 2617 ntTSL 5 BASIC5.77□□□□□ -1.49
HNF4AP41235 PRIM2-201ENST00000274891 864 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
HNF4AP41235 XAGE5-201ENST00000351072 478 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
HNF4AP41235 RN7SKP128-201ENST00000364270 303 ntBASIC5.77□□□□□ -1.49
HNF4AP41235 RNA5SP211-201ENST00000365516 117 ntBASIC5.77□□□□□ -1.49
HNF4AP41235 SNORA51.9-201ENST00000384295 124 ntBASIC5.77□□□□□ -1.49
HNF4AP41235 NPM1P37-201ENST00000403105 874 ntBASIC5.77□□□□□ -1.49
HNF4AP41235 RN7SKP17-201ENST00000411242 351 ntBASIC5.77□□□□□ -1.49
HNF4AP41235 LIX1L-AS1-202ENST00000412239 570 ntTSL 2 BASIC5.77□□□□□ -1.49
HNF4AP41235 AC022173.1-201ENST00000418554 577 ntTSL 4 BASIC5.77□□□□□ -1.49
HNF4AP41235 AC099677.3-201ENST00000427081 395 ntBASIC5.77□□□□□ -1.49
HNF4AP41235 SLC36A1-202ENST00000429484 977 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
HNF4AP41235 ATP5LP2-201ENST00000440646 311 ntBASIC5.77□□□□□ -1.49
HNF4AP41235 RPL6P30-201ENST00000443382 862 ntBASIC5.77□□□□□ -1.49
HNF4AP41235 LINC01809-201ENST00000448431 303 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
HNF4AP41235 Z99916.1-201ENST00000454253 482 ntTSL 3 BASIC5.77□□□□□ -1.49
HNF4AP41235 C1DP3-201ENST00000455013 423 ntBASIC5.77□□□□□ -1.49
HNF4AP41235 RPL31P53-201ENST00000457065 348 ntBASIC5.77□□□□□ -1.49
HNF4AP41235 AC009963.3-201ENST00000458090 486 ntBASIC5.77□□□□□ -1.49
HNF4AP41235 AC092865.4-201ENST00000477936 615 ntBASIC5.77□□□□□ -1.49
HNF4AP41235 RPL37P23-201ENST00000492641 294 ntBASIC5.77□□□□□ -1.49
HNF4AP41235 GYPA-203ENST00000503627 318 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
HNF4AP41235 AC006296.2-201ENST00000507932 764 ntTSL 3 BASIC5.77□□□□□ -1.49
HNF4AP41235 TOMM22P4-201ENST00000511318 336 ntBASIC5.77□□□□□ -1.49
HNF4AP41235 IGKV1OR22-1-201ENST00000521497 360 ntBASIC5.77□□□□□ -1.49
HNF4AP41235 PPP1R42-212ENST00000522909 1282 ntAPPRIS ALT2 TSL 5 BASIC5.77□□□□□ -1.49
HNF4AP41235 CREBZF-209ENST00000534224 545 ntTSL 4 BASIC5.77□□□□□ -1.49
HNF4AP41235 LRTOMT-215ENST00000538478 814 ntTSL 2 BASIC5.77□□□□□ -1.49
HNF4AP41235 AL671883.2-201ENST00000539514 536 ntTSL 4 BASIC5.77□□□□□ -1.49
HNF4AP41235 OR9A4-201ENST00000548136 1093 ntAPPRIS P1 BASIC5.77□□□□□ -1.49
HNF4AP41235 LINC02392-201ENST00000548172 537 ntTSL 4 BASIC5.77□□□□□ -1.49
HNF4AP41235 AC068643.1-201ENST00000548594 755 ntTSL 5 BASIC5.77□□□□□ -1.49
HNF4AP41235 AC090519.2-201ENST00000559034 655 ntTSL 5 BASIC5.77□□□□□ -1.49
HNF4AP41235 AC040918.1-201ENST00000560056 632 ntTSL 2 BASIC5.77□□□□□ -1.49
HNF4AP41235 AC018552.1-201ENST00000562099 811 ntBASIC5.77□□□□□ -1.49
HNF4AP41235 AC007346.2-201ENST00000564816 892 ntBASIC5.77□□□□□ -1.49
HNF4AP41235 AC002310.3-201ENST00000569728 723 ntBASIC5.77□□□□□ -1.49
HNF4AP41235 TEX26-AS1-204ENST00000585582 853 ntTSL 5 BASIC5.77□□□□□ -1.49
HNF4AP41235 LINC00907-202ENST00000585639 915 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
HNF4AP41235 AC006115.2-201ENST00000596823 202 ntBASIC5.77□□□□□ -1.49
HNF4AP41235 AC073488.3-201ENST00000631611 778 ntBASIC5.77□□□□□ -1.49
HNF4AP41235 VWC2L-201ENST00000312504 4610 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
HNF4AP41235 RYR3-212ENST00000634891 15591 ntAPPRIS P3 TSL 1 (best) BASIC5.77□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 123.2 ms