Protein–RNA interactions for Protein: P30622

CLIP1, CAP-Gly domain-containing linker protein 1, humanhuman

Predictions only

Length 1,438 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1P30622 TERB1-203ENST00000558713 2257 ntAPPRIS P1 TSL 5 BASIC8.89□□□□□ -0.99
CLIP1P30622 OR52A5-202ENST00000642125 3993 ntAPPRIS P1 BASIC8.89□□□□□ -0.99
CLIP1P30622 GPR52-201ENST00000367685 1088 ntAPPRIS P1 BASIC8.88□□□□□ -0.99
CLIP1P30622 SNORA70.9-201ENST00000384370 135 ntBASIC8.88□□□□□ -0.99
CLIP1P30622 RNA5SP339-201ENST00000390987 122 ntBASIC8.88□□□□□ -0.99
CLIP1P30622 AL139148.1-201ENST00000427122 680 ntBASIC8.88□□□□□ -0.99
CLIP1P30622 AL596266.1-201ENST00000448132 400 ntBASIC8.88□□□□□ -0.99
CLIP1P30622 RN7SL172P-201ENST00000460535 303 ntBASIC8.88□□□□□ -0.99
CLIP1P30622 RN7SL329P-201ENST00000467740 299 ntBASIC8.88□□□□□ -0.99
CLIP1P30622 RN7SL222P-201ENST00000476452 299 ntBASIC8.88□□□□□ -0.99
CLIP1P30622 DPP8-210ENST00000559233 2953 ntAPPRIS P4 TSL 2 BASIC8.88□□□□□ -0.99
CLIP1P30622 AC009019.1-203ENST00000568603 515 ntTSL 5 BASIC8.88□□□□□ -0.99
CLIP1P30622 AC142086.4-201ENST00000568904 650 ntTSL 3 BASIC8.88□□□□□ -0.99
CLIP1P30622 AC010245.2-201ENST00000606908 1167 ntBASIC8.88□□□□□ -0.99
CLIP1P30622 AC015574.1-205ENST00000611285 524 ntTSL 5 BASIC8.88□□□□□ -0.99
CLIP1P30622 AC136428.4-201ENST00000634254 1155 ntBASIC8.88□□□□□ -0.99
CLIP1P30622 TSPAN6-204ENST00000612152 3796 ntTSL 5 BASIC8.88□□□□□ -0.99
CLIP1P30622 NELL2-201ENST00000333837 2943 ntTSL 2 BASIC8.88□□□□□ -0.99
CLIP1P30622 ZNF585B-205ENST00000532828 6210 ntAPPRIS P1 TSL 1 (best) BASIC8.88□□□□□ -0.99
CLIP1P30622 SORCS1-209ENST00000612154 6862 ntTSL 5 BASIC8.88□□□□□ -0.99
CLIP1P30622 JAKMIP2-205ENST00000507386 5915 ntTSL 1 (best) BASIC8.88□□□□□ -0.99
CLIP1P30622 CAPRIN2-202ENST00000395805 4156 ntTSL 1 (best) BASIC8.88□□□□□ -0.99
CLIP1P30622 LMOD3-201ENST00000420581 4086 ntAPPRIS P1 TSL 1 (best) BASIC8.88□□□□□ -0.99
CLIP1P30622 PSD3-204ENST00000440756 11690 ntAPPRIS ALT2 TSL 5 BASIC8.88□□□□□ -0.99
CLIP1P30622 NIN-217ENST00000530997 8368 ntAPPRIS P5 TSL 5 BASIC8.88□□□□□ -0.99
CLIP1P30622 FAM197Y2-202ENST00000448006 2338 ntTSL 2 BASIC8.88□□□□□ -0.99
CLIP1P30622 GAS1RR-201ENST00000415801 4387 ntTSL 1 (best) BASIC8.88□□□□□ -0.99
CLIP1P30622 ZNF345-215ENST00000614069 3103 ntAPPRIS P1 TSL 3 BASIC8.88□□□□□ -0.99
CLIP1P30622 EFNA5-206ENST00000611503 4933 ntTSL 5 BASIC8.88□□□□□ -0.99
CLIP1P30622 LDHC-201ENST00000280704 1256 ntAPPRIS P1 TSL 1 (best) BASIC8.88□□□□□ -0.99
CLIP1P30622 AL121886.1-201ENST00000358609 435 ntBASIC8.88□□□□□ -0.99
CLIP1P30622 RNA5SP319-201ENST00000362768 119 ntBASIC8.88□□□□□ -0.99
CLIP1P30622 RNA5SP507-201ENST00000363603 121 ntBASIC8.88□□□□□ -0.99
CLIP1P30622 RNA5SP335-201ENST00000363817 110 ntBASIC8.88□□□□□ -0.99
CLIP1P30622 TMEM183AP1-205ENST00000432739 290 ntBASIC8.88□□□□□ -0.99
CLIP1P30622 LINC00380-201ENST00000442478 353 ntTSL 2 BASIC8.88□□□□□ -0.99
CLIP1P30622 LINC01789-201ENST00000443123 860 ntTSL 5 BASIC8.88□□□□□ -0.99
CLIP1P30622 AL161629.1-201ENST00000446201 457 ntTSL 3 BASIC8.88□□□□□ -0.99
CLIP1P30622 AL035090.1-201ENST00000454835 332 ntBASIC8.88□□□□□ -0.99
CLIP1P30622 AC008953.1-201ENST00000497334 318 ntBASIC8.88□□□□□ -0.99
CLIP1P30622 AC015522.1-201ENST00000523678 640 ntTSL 3 BASIC8.88□□□□□ -0.99
CLIP1P30622 PMS2P3-207ENST00000529061 717 ntBASIC8.88□□□□□ -0.99
CLIP1P30622 C8orf59-206ENST00000545322 491 ntTSL 3 BASIC8.88□□□□□ -0.99
CLIP1P30622 TMSB15B-207ENST00000598087 947 ntAPPRIS P1 TSL 1 (best) BASIC8.88□□□□□ -0.99
CLIP1P30622 AC068870.2-201ENST00000620635 389 ntBASIC8.88□□□□□ -0.99
CLIP1P30622 RABGAP1L-218ENST00000489615 6821 ntTSL 1 (best) BASIC8.88□□□□□ -0.99
CLIP1P30622 POGZ-213ENST00000491586 4130 ntTSL 5 BASIC8.87□□□□□ -0.99
CLIP1P30622 C15orf54-202ENST00000625107 3078 ntTSL 1 (best) BASIC8.87□□□□□ -0.99
CLIP1P30622 AMY1C-201ENST00000370079 1632 ntAPPRIS P1 TSL 1 (best) BASIC8.87□□□□□ -0.99
CLIP1P30622 ERP27-201ENST00000266397 2096 ntAPPRIS P1 TSL 1 (best) BASIC8.87□□□□□ -0.99
CLIP1P30622 AC083899.1-201ENST00000454465 3819 ntBASIC8.87□□□□□ -0.99
CLIP1P30622 AL162456.1-201ENST00000634535 2006 ntBASIC8.87□□□□□ -0.99
CLIP1P30622 NAT1-208ENST00000520546 1446 ntAPPRIS P1 BASIC8.87□□□□□ -0.99
CLIP1P30622 PARD3B-213ENST00000614500 7538 ntTSL 5 BASIC8.87□□□□□ -0.99
CLIP1P30622 ZNF766-201ENST00000439461 6298 ntAPPRIS P2 TSL 1 (best) BASIC8.87□□□□□ -0.99
CLIP1P30622 PAK3-201ENST00000262836 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC8.87□□□□□ -0.99
CLIP1P30622 PAK3-205ENST00000417227 2196 ntTSL 1 (best) BASIC8.87□□□□□ -0.99
CLIP1P30622 AC005703.1-201ENST00000431343 1773 ntTSL 2 BASIC8.87□□□□□ -0.99
CLIP1P30622 AL357153.1-201ENST00000500016 2941 ntTSL 2 BASIC8.87□□□□□ -0.99
CLIP1P30622 MSR1-204ENST00000381998 2826 ntTSL 1 (best) BASIC8.87□□□□□ -0.99
CLIP1P30622 GALNT5-201ENST00000259056 6171 ntAPPRIS P1 TSL 1 (best) BASIC8.87□□□□□ -0.99
CLIP1P30622 SNORA16A-201ENST00000384342 137 ntBASIC8.87□□□□□ -0.99
CLIP1P30622 MIR3681HG-202ENST00000412606 578 ntTSL 5 BASIC8.87□□□□□ -0.99
CLIP1P30622 AC006455.6-201ENST00000426192 893 ntBASIC8.87□□□□□ -0.99
CLIP1P30622 AC006055.1-201ENST00000432423 411 ntTSL 3 BASIC8.87□□□□□ -0.99
CLIP1P30622 PCBP1-AS1-232ENST00000442040 1111 ntTSL 3 BASIC8.87□□□□□ -0.99
CLIP1P30622 AC079226.2-201ENST00000509283 518 ntTSL 2 BASIC8.87□□□□□ -0.99
CLIP1P30622 MYLK-AS2-201ENST00000510827 500 ntTSL 3 BASIC8.87□□□□□ -0.99
CLIP1P30622 AC093305.1-201ENST00000514105 522 ntTSL 5 BASIC8.87□□□□□ -0.99
CLIP1P30622 CDC42P3-201ENST00000518493 633 ntBASIC8.87□□□□□ -0.99
CLIP1P30622 ATPAF1-210ENST00000532925 998 ntTSL 2 BASIC8.87□□□□□ -0.99
CLIP1P30622 AC126177.5-201ENST00000549599 178 ntBASIC8.87□□□□□ -0.99
CLIP1P30622 AC004825.1-201ENST00000555068 586 ntBASIC8.87□□□□□ -0.99
CLIP1P30622 LINC02129-201ENST00000564381 692 ntTSL 5 BASIC8.87□□□□□ -0.99
CLIP1P30622 AC009962.1-201ENST00000567327 3813 ntBASIC8.87□□□□□ -0.99
CLIP1P30622 AC113418.1-201ENST00000569928 517 ntTSL 1 (best) BASIC8.87□□□□□ -0.99
CLIP1P30622 AC060780.2-201ENST00000589047 198 ntBASIC8.87□□□□□ -0.99
CLIP1P30622 AC105265.3-202ENST00000610188 459 ntTSL 5 BASIC8.87□□□□□ -0.99
CLIP1P30622 SLC6A14-202ENST00000598581 4520 ntAPPRIS P1 TSL 1 (best) BASIC8.87□□□□□ -0.99
CLIP1P30622 C1orf27-201ENST00000287859 3792 ntAPPRIS P1 TSL 1 (best) BASIC8.87□□□□□ -0.99
CLIP1P30622 ZNF280B-201ENST00000613655 3714 ntAPPRIS P1 TSL 5 BASIC8.87□□□□□ -0.99
CLIP1P30622 PRRC1-204ENST00000512635 2726 ntTSL 1 (best) BASIC8.86□□□□□ -0.99
CLIP1P30622 AC007938.2-201ENST00000604666 2634 ntBASIC8.86□□□□□ -0.99
CLIP1P30622 AC137056.2-201ENST00000624055 1958 ntBASIC8.86□□□□□ -0.99
CLIP1P30622 CNOT1-202ENST00000441024 4999 ntTSL 1 (best) BASIC8.86□□□□□ -0.99
CLIP1P30622 PLCB1-202ENST00000378637 3864 ntTSL 1 (best) BASIC8.86□□□□□ -0.99
CLIP1P30622 GRID2-204ENST00000510992 2739 ntTSL 1 (best) BASIC8.86□□□□□ -0.99
CLIP1P30622 METTL15P3-201ENST00000415522 1221 ntBASIC8.86□□□□□ -0.99
CLIP1P30622 SUMO2P1-206ENST00000445436 284 ntBASIC8.86□□□□□ -0.99
CLIP1P30622 AL137005.1-201ENST00000452944 719 ntTSL 5 BASIC8.86□□□□□ -0.99
CLIP1P30622 AC018742.1-202ENST00000457901 504 ntTSL 3 BASIC8.86□□□□□ -0.99
CLIP1P30622 AC063979.2-201ENST00000513767 958 ntTSL 5 BASIC8.86□□□□□ -0.99
CLIP1P30622 AC009623.1-201ENST00000517964 1131 ntTSL 2 BASIC8.86□□□□□ -0.99
CLIP1P30622 TSC1-201ENST00000298552 8604 ntAPPRIS P1 TSL 1 (best) BASIC8.86□□□□□ -0.99
CLIP1P30622 CRB1-209ENST00000535699 5140 ntTSL 5 BASIC8.86□□□□□ -0.99
CLIP1P30622 IKZF2-201ENST00000342002 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC8.86□□□□□ -0.99
CLIP1P30622 CEP250-202ENST00000397527 15703 ntAPPRIS P1 TSL 5 BASIC8.86□□□□□ -0.99
CLIP1P30622 DHX32-201ENST00000284690 3070 ntAPPRIS P1 TSL 1 (best) BASIC8.86□□□□□ -0.99
CLIP1P30622 RUFY3-202ENST00000381006 3098 ntAPPRIS P1 TSL 5 BASIC8.86□□□□□ -0.99
CLIP1P30622 RAB30-216ENST00000612684 9783 ntAPPRIS P1 TSL 3 BASIC8.85□□□□□ -0.99
Retrieved 100 of 98,524 protein–RNA pairs in 400 ms