Protein–RNA interactions for Protein: P20036

HLA-DPA1, HLA class II histocompatibility antigen, DP alpha 1 chain, humanhuman

Predictions only

Length 260 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA1P20036 AC018709.1-201ENST00000509111 700 ntAPPRIS P1 TSL 3 BASIC5.91□□□□□ -1.46
HLA-DPA1P20036 GLYATL1P2-201ENST00000529451 510 ntTSL 2 BASIC5.91□□□□□ -1.46
HLA-DPA1P20036 AC091078.2-201ENST00000557145 559 ntBASIC5.91□□□□□ -1.46
HLA-DPA1P20036 AC105339.2-201ENST00000558342 1091 ntTSL 3 BASIC5.91□□□□□ -1.46
HLA-DPA1P20036 LINC02345-203ENST00000558897 405 ntTSL 3 BASIC5.91□□□□□ -1.46
HLA-DPA1P20036 AC090888.3-201ENST00000558917 509 ntBASIC5.91□□□□□ -1.46
HLA-DPA1P20036 AC009087.1-201ENST00000561827 369 ntTSL 3 BASIC5.91□□□□□ -1.46
HLA-DPA1P20036 PINLYP-205ENST00000569031 557 ntTSL 2 BASIC5.91□□□□□ -1.46
HLA-DPA1P20036 AC090826.1-203ENST00000569235 490 ntBASIC5.91□□□□□ -1.46
HLA-DPA1P20036 AC005726.4-201ENST00000582858 458 ntBASIC5.91□□□□□ -1.46
HLA-DPA1P20036 AC092070.2-201ENST00000597550 545 ntTSL 4 BASIC5.91□□□□□ -1.46
HLA-DPA1P20036 ZNF528-211ENST00000598192 625 ntTSL 3 BASIC5.91□□□□□ -1.46
HLA-DPA1P20036 ZNF418-210ENST00000600989 597 ntTSL 5 BASIC5.91□□□□□ -1.46
HLA-DPA1P20036 AC073218.2-202ENST00000605962 617 ntTSL 5 BASIC5.91□□□□□ -1.46
HLA-DPA1P20036 MIR1910-201ENST00000636955 80 ntBASIC5.91□□□□□ -1.46
HLA-DPA1P20036 NOSTRIN-207ENST00000445023 1569 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
HLA-DPA1P20036 NAT2-201ENST00000286479 1322 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
HLA-DPA1P20036 FBXL21-201ENST00000297158 1305 ntBASIC5.91□□□□□ -1.46
HLA-DPA1P20036 SLC9B1P1-201ENST00000331172 1337 ntBASIC5.91□□□□□ -1.46
HLA-DPA1P20036 CASC15-207ENST00000607048 1634 ntTSL 2 BASIC5.91□□□□□ -1.46
HLA-DPA1P20036 HHLA2-211ENST00000619531 2548 ntAPPRIS P3 TSL 5 BASIC5.91□□□□□ -1.46
HLA-DPA1P20036 PRDM2-206ENST00000413440 6175 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
HLA-DPA1P20036 NOSTRIN-201ENST00000317647 2294 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
HLA-DPA1P20036 AC011604.2-201ENST00000381541 2268 ntAPPRIS ALT2 TSL 2 BASIC5.91□□□□□ -1.46
HLA-DPA1P20036 DCN-218ENST00000551354 2924 ntTSL 3 BASIC5.91□□□□□ -1.46
HLA-DPA1P20036 DCDC1-207ENST00000452803 1706 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
HLA-DPA1P20036 DOPEY1-201ENST00000237163 7995 ntAPPRIS ALT1 TSL 5 BASIC5.9□□□□□ -1.46
HLA-DPA1P20036 ZNF300P1-202ENST00000520773 3115 ntTSL 5 BASIC5.9□□□□□ -1.46
HLA-DPA1P20036 PPP2R5E-202ENST00000422769 3478 ntTSL 2 BASIC5.9□□□□□ -1.46
HLA-DPA1P20036 TBC1D15-201ENST00000319106 2159 ntTSL 2 BASIC5.9□□□□□ -1.46
HLA-DPA1P20036 PIGN-239ENST00000639902 4439 ntTSL 5 BASIC5.9□□□□□ -1.46
HLA-DPA1P20036 CRYGS-201ENST00000307944 759 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
HLA-DPA1P20036 OR7E25P-201ENST00000344844 931 ntBASIC5.9□□□□□ -1.46
HLA-DPA1P20036 PRSS37-201ENST00000350549 1189 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
HLA-DPA1P20036 APOOL-201ENST00000373173 1279 ntAPPRIS P2 TSL 1 (best) BASIC5.9□□□□□ -1.46
HLA-DPA1P20036 STMN1-202ENST00000374291 867 ntAPPRIS P1 TSL 2 BASIC5.9□□□□□ -1.46
HLA-DPA1P20036 GAPDHP15-201ENST00000398586 975 ntBASIC5.9□□□□□ -1.46
HLA-DPA1P20036 DNAJA1P3-201ENST00000399417 1194 ntBASIC5.9□□□□□ -1.46
HLA-DPA1P20036 SYCE3-202ENST00000406915 448 ntAPPRIS P1 TSL 2 BASIC5.9□□□□□ -1.46
HLA-DPA1P20036 AC117434.1-201ENST00000419971 836 ntBASIC5.9□□□□□ -1.46
HLA-DPA1P20036 AL139240.1-201ENST00000422963 505 ntTSL 2 BASIC5.9□□□□□ -1.46
HLA-DPA1P20036 CRIP1P1-201ENST00000427567 185 ntBASIC5.9□□□□□ -1.46
HLA-DPA1P20036 FTO-202ENST00000431610 707 ntTSL 3 BASIC5.9□□□□□ -1.46
HLA-DPA1P20036 MAJIN-202ENST00000432175 838 ntAPPRIS P3 TSL 1 (best) BASIC5.9□□□□□ -1.46
HLA-DPA1P20036 C1orf140-201ENST00000434398 645 ntTSL 3 BASIC5.9□□□□□ -1.46
HLA-DPA1P20036 RPS10P18-201ENST00000442662 495 ntBASIC5.9□□□□□ -1.46
HLA-DPA1P20036 MTND4LP12-201ENST00000448237 295 ntBASIC5.9□□□□□ -1.46
HLA-DPA1P20036 FRG2FP-204ENST00000453982 852 ntBASIC5.9□□□□□ -1.46
HLA-DPA1P20036 AL157777.1-201ENST00000468100 304 ntBASIC5.9□□□□□ -1.46
HLA-DPA1P20036 AC006539.1-201ENST00000481419 501 ntBASIC5.9□□□□□ -1.46
HLA-DPA1P20036 NADK2-AS1-201ENST00000501794 720 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
HLA-DPA1P20036 AC025458.1-201ENST00000506046 166 ntBASIC5.9□□□□□ -1.46
HLA-DPA1P20036 AC024224.2-201ENST00000544225 782 ntTSL 3 BASIC5.9□□□□□ -1.46
HLA-DPA1P20036 LINC02400-201ENST00000548210 351 ntTSL 2 BASIC5.9□□□□□ -1.46
HLA-DPA1P20036 TWF1-207ENST00000548315 1170 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
HLA-DPA1P20036 LINC01234-204ENST00000550905 589 ntTSL 3 BASIC5.9□□□□□ -1.46
HLA-DPA1P20036 AC067773.1-201ENST00000603284 1094 ntBASIC5.9□□□□□ -1.46
HLA-DPA1P20036 AL359742.1-201ENST00000622497 540 ntBASIC5.9□□□□□ -1.46
HLA-DPA1P20036 AC129778.1-202ENST00000623812 261 ntBASIC5.9□□□□□ -1.46
HLA-DPA1P20036 PCBP1-AS1-282ENST00000625783 826 ntTSL 5 BASIC5.9□□□□□ -1.46
HLA-DPA1P20036 AL591379.1-207ENST00000635982 261 ntBASIC5.9□□□□□ -1.46
HLA-DPA1P20036 AMYH02020865.1-205ENST00000636189 261 ntBASIC5.9□□□□□ -1.46
HLA-DPA1P20036 AC099654.6-201ENST00000636487 512 ntBASIC5.9□□□□□ -1.46
HLA-DPA1P20036 BACH1-201ENST00000286800 5669 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
HLA-DPA1P20036 C17orf78-203ENST00000611038 1675 ntAPPRIS ALT2 TSL 2 BASIC5.9□□□□□ -1.47
HLA-DPA1P20036 NCOA3-203ENST00000372004 7939 ntAPPRIS ALT2 TSL 1 (best) BASIC5.9□□□□□ -1.47
HLA-DPA1P20036 TCF7L2-219ENST00000542695 4136 ntTSL 5 BASIC5.9□□□□□ -1.47
HLA-DPA1P20036 KBTBD3-201ENST00000526793 3751 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.47
HLA-DPA1P20036 CACNB4-243ENST00000637217 8188 ntTSL 5 BASIC5.9□□□□□ -1.47
HLA-DPA1P20036 KSR2-202ENST00000425217 17008 ntTSL 5 BASIC5.9□□□□□ -1.47
HLA-DPA1P20036 DSC2-202ENST00000280904 12325 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.47
HLA-DPA1P20036 ABCA10-201ENST00000269081 6362 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.47
HLA-DPA1P20036 FOXP2-204ENST00000390668 1472 ntTSL 1 (best) BASIC5.9□□□□□ -1.47
HLA-DPA1P20036 LINC01520-201ENST00000441457 1487 ntTSL 1 (best) BASIC5.9□□□□□ -1.47
HLA-DPA1P20036 PALMD-203ENST00000605497 1942 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
HLA-DPA1P20036 KLRC4-KLRK1-201ENST00000539300 1507 ntAPPRIS P5 TSL 2 BASIC5.89□□□□□ -1.47
HLA-DPA1P20036 TYW3-203ENST00000457880 3335 ntTSL 2 BASIC5.89□□□□□ -1.47
HLA-DPA1P20036 C1orf112-201ENST00000286031 4355 ntAPPRIS P3 TSL 1 (best) BASIC5.89□□□□□ -1.47
HLA-DPA1P20036 GLYATL1-201ENST00000300079 2068 ntAPPRIS P3 TSL 2 BASIC5.89□□□□□ -1.47
HLA-DPA1P20036 Z95114.1-201ENST00000624264 14574 ntBASIC5.89□□□□□ -1.47
HLA-DPA1P20036 PSG4-201ENST00000244295 1629 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
HLA-DPA1P20036 ZEB2-241ENST00000637304 9158 ntTSL 5 BASIC5.89□□□□□ -1.47
HLA-DPA1P20036 SCN2A-203ENST00000375437 8792 ntAPPRIS ALT1 TSL 5 BASIC5.89□□□□□ -1.47
HLA-DPA1P20036 CYP3A7-CYP3A51P-202ENST00000620220 1704 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
HLA-DPA1P20036 ZNF480-204ENST00000490272 2238 ntTSL 2 BASIC5.89□□□□□ -1.47
HLA-DPA1P20036 BTLA-201ENST00000334529 3213 ntAPPRIS P3 TSL 1 (best) BASIC5.89□□□□□ -1.47
HLA-DPA1P20036 CLEC2D-202ENST00000261340 935 ntAPPRIS ALT2 TSL 1 (best) BASIC5.89□□□□□ -1.47
HLA-DPA1P20036 SSX3-201ENST00000298396 1232 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
HLA-DPA1P20036 TRBV23-1-201ENST00000390396 347 ntAPPRIS P1 BASIC5.89□□□□□ -1.47
HLA-DPA1P20036 RPL11P3-201ENST00000395256 523 ntBASIC5.89□□□□□ -1.47
HLA-DPA1P20036 HSD17B7P1-201ENST00000412419 1017 ntBASIC5.89□□□□□ -1.47
HLA-DPA1P20036 AL354890.1-201ENST00000413730 346 ntBASIC5.89□□□□□ -1.47
HLA-DPA1P20036 AL162400.1-201ENST00000418091 359 ntTSL 5 BASIC5.89□□□□□ -1.47
HLA-DPA1P20036 AC106901.1-201ENST00000425086 698 ntBASIC5.89□□□□□ -1.47
HLA-DPA1P20036 LINC00383-201ENST00000433664 817 ntTSL 3 BASIC5.89□□□□□ -1.47
HLA-DPA1P20036 DNAJA1P5-201ENST00000440278 943 ntBASIC5.89□□□□□ -1.47
HLA-DPA1P20036 EIF5AP4-201ENST00000441206 465 ntBASIC5.89□□□□□ -1.47
HLA-DPA1P20036 AL158850.1-201ENST00000441249 914 ntTSL 3 BASIC5.89□□□□□ -1.47
HLA-DPA1P20036 CASP5-205ENST00000444749 1237 ntAPPRIS P1 TSL 2 BASIC5.89□□□□□ -1.47
HLA-DPA1P20036 AC004129.2-201ENST00000457229 287 ntBASIC5.89□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 88.1 ms