Protein–RNA interactions for Protein: P09341

CXCL1, Growth-regulated alpha protein, humanhuman

Predictions only

Length 107 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL1P09341 AKAP9-201ENST00000356239 12471 ntAPPRIS P2 TSL 1 (best) BASIC4.33□□□□□ -1.72
CXCL1P09341 SIAH1-202ENST00000380006 3352 ntAPPRIS P3 BASIC4.33□□□□□ -1.72
CXCL1P09341 ZNF701-202ENST00000391785 2634 ntAPPRIS P3 TSL 1 (best) BASIC4.33□□□□□ -1.72
CXCL1P09341 AC068870.1-201ENST00000563737 2455 ntBASIC4.33□□□□□ -1.72
CXCL1P09341 AC004784.1-201ENST00000635495 1833 ntTSL 5 BASIC4.33□□□□□ -1.72
CXCL1P09341 PSG10P-201ENST00000501199 1500 ntBASIC4.33□□□□□ -1.72
CXCL1P09341 ZNF624-201ENST00000311331 4241 ntAPPRIS P1 TSL 2 BASIC4.33□□□□□ -1.72
CXCL1P09341 OBSCN-214ENST00000636875 23907 ntTSL 5 BASIC4.33□□□□□ -1.72
CXCL1P09341 NDFIP2-203ENST00000487865 1384 ntTSL 2 BASIC4.33□□□□□ -1.72
CXCL1P09341 PCDH15-214ENST00000395446 3948 ntTSL 5 BASIC4.33□□□□□ -1.72
CXCL1P09341 SPP2-201ENST00000168148 1024 ntAPPRIS P2 TSL 1 (best) BASIC4.33□□□□□ -1.72
CXCL1P09341 SNORD94-201ENST00000386037 137 ntBASIC4.33□□□□□ -1.72
CXCL1P09341 AL157702.1-201ENST00000398764 426 ntBASIC4.33□□□□□ -1.72
CXCL1P09341 RNA5SP296-201ENST00000410523 111 ntBASIC4.33□□□□□ -1.72
CXCL1P09341 EMX2OS-201ENST00000412075 1025 ntTSL 2 BASIC4.33□□□□□ -1.72
CXCL1P09341 MRPL53P1-201ENST00000414323 319 ntBASIC4.33□□□□□ -1.72
CXCL1P09341 AP006748.1-201ENST00000418874 346 ntTSL 3 BASIC4.33□□□□□ -1.72
CXCL1P09341 TRGV5P-201ENST00000419915 354 ntBASIC4.33□□□□□ -1.72
CXCL1P09341 AC104333.2-201ENST00000422630 192 ntBASIC4.33□□□□□ -1.72
CXCL1P09341 OR2AH1P-201ENST00000425717 928 ntBASIC4.33□□□□□ -1.72
CXCL1P09341 CYP1B1-AS1-202ENST00000427168 484 ntTSL 4 BASIC4.33□□□□□ -1.72
CXCL1P09341 RPS12P17-201ENST00000438591 377 ntBASIC4.33□□□□□ -1.72
CXCL1P09341 AL645936.1-201ENST00000441979 518 ntBASIC4.33□□□□□ -1.72
CXCL1P09341 SEPT14P12-201ENST00000442280 560 ntBASIC4.33□□□□□ -1.72
CXCL1P09341 BMS1P10-201ENST00000443754 1120 ntBASIC4.33□□□□□ -1.72
CXCL1P09341 AL049649.1-201ENST00000444792 1105 ntTSL 5 BASIC4.33□□□□□ -1.72
CXCL1P09341 COX4I1P2-201ENST00000447446 547 ntBASIC4.33□□□□□ -1.72
CXCL1P09341 AL445991.1-201ENST00000450381 475 ntBASIC4.33□□□□□ -1.72
CXCL1P09341 ATP5J-207ENST00000457143 589 ntTSL 2 BASIC4.33□□□□□ -1.72
CXCL1P09341 PEX5L-AS1-201ENST00000466064 827 ntTSL 2 BASIC4.33□□□□□ -1.72
CXCL1P09341 AP003385.3-201ENST00000472498 287 ntBASIC4.33□□□□□ -1.72
CXCL1P09341 AC104411.1-201ENST00000480817 320 ntTSL 3 BASIC4.33□□□□□ -1.72
CXCL1P09341 AC005017.1-201ENST00000482002 490 ntBASIC4.33□□□□□ -1.72
CXCL1P09341 WDFY3-AS1-201ENST00000510449 493 ntTSL 3 BASIC4.33□□□□□ -1.72
CXCL1P09341 AC069272.1-201ENST00000514843 680 ntTSL 3 BASIC4.33□□□□□ -1.72
CXCL1P09341 AC110056.1-201ENST00000525759 911 ntBASIC4.33□□□□□ -1.72
CXCL1P09341 AC130365.2-201ENST00000525882 1201 ntBASIC4.33□□□□□ -1.72
CXCL1P09341 AC103855.4-201ENST00000533158 265 ntBASIC4.33□□□□□ -1.72
CXCL1P09341 AC234917.1-201ENST00000534006 316 ntTSL 3 BASIC4.33□□□□□ -1.72
CXCL1P09341 AC122688.1-201ENST00000541494 223 ntBASIC4.33□□□□□ -1.72
CXCL1P09341 VPS29-210ENST00000552130 1057 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
CXCL1P09341 CLMN-206ENST00000556441 452 ntTSL 5 BASIC4.33□□□□□ -1.72
CXCL1P09341 RPS15A-203ENST00000563390 525 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
CXCL1P09341 MIR378H-201ENST00000579966 83 ntBASIC4.33□□□□□ -1.72
CXCL1P09341 AL589935.1-223ENST00000587015 808 ntTSL 5 BASIC4.33□□□□□ -1.72
CXCL1P09341 AP000654.1-201ENST00000602510 1192 ntTSL 5 BASIC4.33□□□□□ -1.72
CXCL1P09341 AL356608.1-201ENST00000610034 820 ntBASIC4.33□□□□□ -1.72
CXCL1P09341 CT45A6-202ENST00000620654 878 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
CXCL1P09341 FP236241.1-206ENST00000625005 987 ntTSL 5 BASIC4.33□□□□□ -1.72
CXCL1P09341 ASB8-218ENST00000629941 278 ntTSL 5 BASIC4.33□□□□□ -1.72
CXCL1P09341 LINC01002-237ENST00000634025 555 ntTSL 5 BASIC4.33□□□□□ -1.72
CXCL1P09341 LINC00682-204ENST00000637677 931 ntTSL 5 BASIC4.33□□□□□ -1.72
CXCL1P09341 HEATR5A-203ENST00000543095 7840 ntAPPRIS P1 TSL 5 BASIC4.33□□□□□ -1.72
CXCL1P09341 ELF2-203ENST00000379550 3278 ntTSL 5 BASIC4.33□□□□□ -1.72
CXCL1P09341 AC245407.1-201ENST00000621489 2538 ntTSL 2 BASIC4.33□□□□□ -1.72
CXCL1P09341 ZNF562-201ENST00000293648 12380 ntTSL 2 BASIC4.33□□□□□ -1.72
CXCL1P09341 LINC01933-204ENST00000524295 3591 ntTSL 2 BASIC4.33□□□□□ -1.72
CXCL1P09341 AK9-204ENST00000424296 6326 ntAPPRIS P1 TSL 5 BASIC4.33□□□□□ -1.72
CXCL1P09341 LRP6-201ENST00000261349 10020 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
CXCL1P09341 PATE4-201ENST00000457514 1983 ntAPPRIS P2 TSL 2 BASIC4.33□□□□□ -1.72
CXCL1P09341 Z94721.2-201ENST00000609590 5310 ntTSL 2 BASIC4.32□□□□□ -1.72
CXCL1P09341 TRPC5OS-201ENST00000371970 2806 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
CXCL1P09341 SMG1-201ENST00000330588 1588 ntTSL 5 BASIC4.32□□□□□ -1.72
CXCL1P09341 ZBTB38-201ENST00000321464 3588 ntAPPRIS P1 BASIC4.32□□□□□ -1.72
CXCL1P09341 AC099654.3-201ENST00000447087 1546 ntBASIC4.32□□□□□ -1.72
CXCL1P09341 RANBP3L-204ENST00000515759 1532 ntTSL 2 BASIC4.32□□□□□ -1.72
CXCL1P09341 SULF1-204ENST00000458141 5551 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
CXCL1P09341 ACE2-202ENST00000427411 3507 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
CXCL1P09341 ANGPT2-201ENST00000325203 5416 ntAPPRIS P3 TSL 1 (best) BASIC4.32□□□□□ -1.72
CXCL1P09341 MTND5P12-201ENST00000502851 1449 ntBASIC4.32□□□□□ -1.72
CXCL1P09341 CLEC1B-204ENST00000428126 3054 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
CXCL1P09341 GNL2P1-201ENST00000451274 2190 ntBASIC4.32□□□□□ -1.72
CXCL1P09341 OR2H1-203ENST00000377136 3024 ntAPPRIS P1 BASIC4.32□□□□□ -1.72
CXCL1P09341 PEAK1-204ENST00000560626 19217 ntAPPRIS P1 TSL 5 BASIC4.32□□□□□ -1.72
CXCL1P09341 PPIG-201ENST00000260970 6368 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
CXCL1P09341 AC092634.1-201ENST00000366505 199 ntBASIC4.32□□□□□ -1.72
CXCL1P09341 PLIN2-203ENST00000380465 631 ntTSL 2 BASIC4.32□□□□□ -1.72
CXCL1P09341 AL033519.1-201ENST00000407266 307 ntBASIC4.32□□□□□ -1.72
CXCL1P09341 AC000058.1-201ENST00000415249 536 ntTSL 4 BASIC4.32□□□□□ -1.72
CXCL1P09341 AC104463.2-201ENST00000428573 314 ntTSL 5 BASIC4.32□□□□□ -1.72
CXCL1P09341 KCTD9P1-201ENST00000430462 1167 ntBASIC4.32□□□□□ -1.72
CXCL1P09341 AL445928.1-201ENST00000435545 222 ntBASIC4.32□□□□□ -1.72
CXCL1P09341 AL136455.1-201ENST00000441083 1240 ntBASIC4.32□□□□□ -1.72
CXCL1P09341 AC015983.1-201ENST00000441577 373 ntBASIC4.32□□□□□ -1.72
CXCL1P09341 TRMT2B-AS1-201ENST00000443801 205 ntTSL 5 BASIC4.32□□□□□ -1.72
CXCL1P09341 AL161722.1-201ENST00000446972 1032 ntBASIC4.32□□□□□ -1.72
CXCL1P09341 AL133319.1-201ENST00000447848 777 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
CXCL1P09341 AL929410.2-201ENST00000451170 189 ntBASIC4.32□□□□□ -1.72
CXCL1P09341 AC002553.3-201ENST00000453002 341 ntBASIC4.32□□□□□ -1.72
CXCL1P09341 MEMO1P4-201ENST00000453590 386 ntBASIC4.32□□□□□ -1.72
CXCL1P09341 RN7SL39P-201ENST00000462264 297 ntBASIC4.32□□□□□ -1.72
CXCL1P09341 AP000942.1-201ENST00000463969 747 ntBASIC4.32□□□□□ -1.72
CXCL1P09341 AL591473.1-201ENST00000464297 313 ntBASIC4.32□□□□□ -1.72
CXCL1P09341 PSAT1P4-201ENST00000466500 526 ntBASIC4.32□□□□□ -1.72
CXCL1P09341 AC010451.1-201ENST00000509057 556 ntTSL 3 BASIC4.32□□□□□ -1.72
CXCL1P09341 AC095052.1-201ENST00000509955 863 ntBASIC4.32□□□□□ -1.72
CXCL1P09341 AC134698.1-201ENST00000511619 643 ntBASIC4.32□□□□□ -1.72
CXCL1P09341 AC112242.1-201ENST00000515805 406 ntTSL 3 BASIC4.32□□□□□ -1.72
CXCL1P09341 SNORA74.1-201ENST00000516320 180 ntBASIC4.32□□□□□ -1.72
CXCL1P09341 AC010834.1-201ENST00000517998 696 ntTSL 2 BASIC4.32□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 70.1 ms