Protein–RNA interactions for Protein: P06340

HLA-DOA, HLA class II histocompatibility antigen, DO alpha chain, humanhuman

Predictions only

Length 250 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOAP06340 AC022031.2-203ENST00000587346 565 ntTSL 4 BASIC6.93□□□□□ -1.3
HLA-DOAP06340 AC008794.2-201ENST00000587779 293 ntTSL 2 BASIC6.93□□□□□ -1.3
HLA-DOAP06340 AC008277.1-203ENST00000594921 1149 ntTSL 5 BASIC6.93□□□□□ -1.3
HLA-DOAP06340 OR7A1P-201ENST00000601206 970 ntBASIC6.93□□□□□ -1.3
HLA-DOAP06340 AC015802.5-201ENST00000607478 399 ntBASIC6.93□□□□□ -1.3
HLA-DOAP06340 AL050303.3-201ENST00000613704 284 ntBASIC6.93□□□□□ -1.3
HLA-DOAP06340 WBP1LP8-201ENST00000617401 327 ntBASIC6.93□□□□□ -1.3
HLA-DOAP06340 NADK2-211ENST00000617628 744 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
HLA-DOAP06340 AC020763.5-201ENST00000623298 430 ntBASIC6.93□□□□□ -1.3
HLA-DOAP06340 AP000770.2-201ENST00000623694 100 ntBASIC6.93□□□□□ -1.3
HLA-DOAP06340 AC079298.3-201ENST00000624941 977 ntTSL 3 BASIC6.93□□□□□ -1.3
HLA-DOAP06340 OR6C71P-202ENST00000641886 1107 ntBASIC6.93□□□□□ -1.3
HLA-DOAP06340 NFAT5-212ENST00000627621 5875 ntAPPRIS ALT1 TSL 2 BASIC6.93□□□□□ -1.3
HLA-DOAP06340 ARRDC3-201ENST00000265138 4188 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
HLA-DOAP06340 BCL2L14-213ENST00000589718 1850 ntAPPRIS P1 TSL 5 BASIC6.93□□□□□ -1.3
HLA-DOAP06340 ECT2L-205ENST00000541398 4483 ntAPPRIS P1 TSL 5 BASIC6.93□□□□□ -1.3
HLA-DOAP06340 WDPCP-203ENST00000409120 5408 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
HLA-DOAP06340 MTND4P9-201ENST00000507819 1346 ntBASIC6.93□□□□□ -1.3
HLA-DOAP06340 CIR1P2-201ENST00000514821 1342 ntBASIC6.93□□□□□ -1.3
HLA-DOAP06340 RALYL-211ENST00000523850 1684 ntTSL 2 BASIC6.93□□□□□ -1.3
HLA-DOAP06340 AC112243.1-201ENST00000623949 3851 ntBASIC6.93□□□□□ -1.3
HLA-DOAP06340 NF1-201ENST00000356175 12362 ntAPPRIS P3 TSL 1 (best) BASIC6.93□□□□□ -1.3
HLA-DOAP06340 OLMALINC-203ENST00000641087 3779 ntBASIC6.92□□□□□ -1.3
HLA-DOAP06340 TCF7L2-219ENST00000542695 4136 ntTSL 5 BASIC6.92□□□□□ -1.3
HLA-DOAP06340 MEF2C-210ENST00000506554 3469 ntTSL 5 BASIC6.92□□□□□ -1.3
HLA-DOAP06340 AL121768.1-201ENST00000613917 2544 ntBASIC6.92□□□□□ -1.3
HLA-DOAP06340 BDNF-217ENST00000533131 3878 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
HLA-DOAP06340 AC068446.1-201ENST00000556425 1549 ntBASIC6.92□□□□□ -1.3
HLA-DOAP06340 ZNF638-201ENST00000264447 6505 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
HLA-DOAP06340 AIG1-208ENST00000494282 3393 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
HLA-DOAP06340 SOS1-201ENST00000395038 4123 ntAPPRIS ALT2 TSL 5 BASIC6.92□□□□□ -1.3
HLA-DOAP06340 SPHAR-201ENST00000366688 648 ntAPPRIS P1 BASIC6.92□□□□□ -1.3
HLA-DOAP06340 AL590006.1-201ENST00000417390 752 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
HLA-DOAP06340 AC015977.1-201ENST00000418887 292 ntBASIC6.92□□□□□ -1.3
HLA-DOAP06340 TRGV7-201ENST00000427089 353 ntBASIC6.92□□□□□ -1.3
HLA-DOAP06340 AC113331.1-201ENST00000428160 869 ntTSL 2 BASIC6.92□□□□□ -1.3
HLA-DOAP06340 Z84478.1-201ENST00000438230 1219 ntBASIC6.92□□□□□ -1.3
HLA-DOAP06340 CATSPER2P1-205ENST00000446479 419 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
HLA-DOAP06340 GTPBP8-204ENST00000467752 686 ntTSL 5 BASIC6.92□□□□□ -1.3
HLA-DOAP06340 AC074386.1-201ENST00000476560 767 ntBASIC6.92□□□□□ -1.3
HLA-DOAP06340 AC138866.2-201ENST00000508650 584 ntBASIC6.92□□□□□ -1.3
HLA-DOAP06340 MTATP6P9-201ENST00000515039 680 ntBASIC6.92□□□□□ -1.3
HLA-DOAP06340 RNU6-615P-201ENST00000516065 106 ntBASIC6.92□□□□□ -1.3
HLA-DOAP06340 RN7SKP288-201ENST00000516227 268 ntBASIC6.92□□□□□ -1.3
HLA-DOAP06340 SNORA43.3-201ENST00000517240 103 ntBASIC6.92□□□□□ -1.3
HLA-DOAP06340 LINC00535-202ENST00000517785 264 ntTSL 3 BASIC6.92□□□□□ -1.3
HLA-DOAP06340 AP003102.1-201ENST00000525638 661 ntBASIC6.92□□□□□ -1.3
HLA-DOAP06340 HNRNPRP2-201ENST00000528421 743 ntBASIC6.92□□□□□ -1.3
HLA-DOAP06340 ATF7IP2-206ENST00000543967 998 ntTSL 2 BASIC6.92□□□□□ -1.3
HLA-DOAP06340 AC020704.1-201ENST00000559394 454 ntTSL 3 BASIC6.92□□□□□ -1.3
HLA-DOAP06340 AC025278.1-201ENST00000593558 515 ntTSL 2 BASIC6.92□□□□□ -1.3
HLA-DOAP06340 Z98949.1-210ENST00000597548 766 ntTSL 5 BASIC6.92□□□□□ -1.3
HLA-DOAP06340 FO393422.1-201ENST00000603908 708 ntBASIC6.92□□□□□ -1.3
HLA-DOAP06340 AL589674.2-201ENST00000604304 337 ntBASIC6.92□□□□□ -1.3
HLA-DOAP06340 AL713998.2-201ENST00000604538 1198 ntBASIC6.92□□□□□ -1.3
HLA-DOAP06340 AC104695.2-201ENST00000605056 775 ntBASIC6.92□□□□□ -1.3
HLA-DOAP06340 Z98949.1-207ENST00000609157 814 ntTSL 5 BASIC6.92□□□□□ -1.3
HLA-DOAP06340 AC022467.1-201ENST00000614738 749 ntBASIC6.92□□□□□ -1.3
HLA-DOAP06340 OR5H6-201ENST00000615035 1113 ntAPPRIS P1 BASIC6.92□□□□□ -1.3
HLA-DOAP06340 MIR6826-201ENST00000617808 98 ntBASIC6.92□□□□□ -1.3
HLA-DOAP06340 AL358975.1-202ENST00000628133 589 ntTSL 5 BASIC6.92□□□□□ -1.3
HLA-DOAP06340 OR5H6-202ENST00000641416 1032 ntAPPRIS P1 BASIC6.92□□□□□ -1.3
HLA-DOAP06340 SLC7A11-201ENST00000280612 9645 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
HLA-DOAP06340 ARPP21-202ENST00000396481 1304 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
HLA-DOAP06340 OLFM4-201ENST00000219022 2897 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
HLA-DOAP06340 NFE2L2-204ENST00000423513 1382 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
HLA-DOAP06340 AL512283.1-201ENST00000606756 1384 ntBASIC6.92□□□□□ -1.3
HLA-DOAP06340 MGAM2-201ENST00000477922 7867 ntAPPRIS P1 TSL 5 BASIC6.92□□□□□ -1.3
HLA-DOAP06340 LINC01720-201ENST00000413356 2216 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
HLA-DOAP06340 NAT1-201ENST00000307719 1815 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
HLA-DOAP06340 TLR7-201ENST00000380659 5011 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
HLA-DOAP06340 CD200R1L-204ENST00000488794 1597 ntAPPRIS ALT2 TSL 5 BASIC6.91□□□□□ -1.3
HLA-DOAP06340 AC130360.2-201ENST00000533477 1556 ntBASIC6.91□□□□□ -1.3
HLA-DOAP06340 LINC02119-201ENST00000508853 2573 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
HLA-DOAP06340 GPATCH2-202ENST00000366935 5851 ntAPPRIS P1 TSL 2 BASIC6.91□□□□□ -1.3
HLA-DOAP06340 LINC01602-201ENST00000522992 2109 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
HLA-DOAP06340 OR2T29-202ENST00000641069 2637 ntAPPRIS P1 BASIC6.91□□□□□ -1.3
HLA-DOAP06340 ESRRG-224ENST00000616180 5194 ntAPPRIS P1 TSL 5 BASIC6.91□□□□□ -1.3
HLA-DOAP06340 OR1F12-201ENST00000402365 945 ntBASIC6.91□□□□□ -1.3
HLA-DOAP06340 ARPP21-AS1-201ENST00000415706 542 ntTSL 4 BASIC6.91□□□□□ -1.3
HLA-DOAP06340 BMS1P17-202ENST00000416720 316 ntBASIC6.91□□□□□ -1.3
HLA-DOAP06340 AL034345.2-202ENST00000416948 830 ntTSL 2 BASIC6.91□□□□□ -1.3
HLA-DOAP06340 AL662874.1-201ENST00000426065 230 ntBASIC6.91□□□□□ -1.3
HLA-DOAP06340 LINC01891-201ENST00000439798 538 ntTSL 4 BASIC6.91□□□□□ -1.3
HLA-DOAP06340 EEF1B2P6-201ENST00000445713 673 ntBASIC6.91□□□□□ -1.3
HLA-DOAP06340 RN7SL466P-201ENST00000497546 295 ntBASIC6.91□□□□□ -1.3
HLA-DOAP06340 AC008945.1-201ENST00000505144 499 ntBASIC6.91□□□□□ -1.3
HLA-DOAP06340 AC074087.1-201ENST00000512059 724 ntBASIC6.91□□□□□ -1.3
HLA-DOAP06340 HMGN1P15-201ENST00000513870 295 ntBASIC6.91□□□□□ -1.3
HLA-DOAP06340 MOCS2-208ENST00000527216 707 ntTSL 3 BASIC6.91□□□□□ -1.3
HLA-DOAP06340 AP003049.1-201ENST00000529418 457 ntBASIC6.91□□□□□ -1.3
HLA-DOAP06340 AC114947.2-202ENST00000569313 643 ntTSL 3 BASIC6.91□□□□□ -1.3
HLA-DOAP06340 ABHD15-AS1-201ENST00000581474 187 ntTSL 5 BASIC6.91□□□□□ -1.3
HLA-DOAP06340 AL589935.1-223ENST00000587015 808 ntTSL 5 BASIC6.91□□□□□ -1.3
HLA-DOAP06340 AP001542.3-201ENST00000587619 527 ntTSL 5 BASIC6.91□□□□□ -1.3
HLA-DOAP06340 AC098617.1-205ENST00000595918 1032 ntTSL 5 BASIC6.91□□□□□ -1.3
HLA-DOAP06340 AC022387.2-201ENST00000604050 448 ntBASIC6.91□□□□□ -1.3
HLA-DOAP06340 AC087468.1-201ENST00000604365 630 ntBASIC6.91□□□□□ -1.3
HLA-DOAP06340 AC008833.1-201ENST00000611633 691 ntBASIC6.91□□□□□ -1.3
HLA-DOAP06340 NOL8-214ENST00000535387 3390 ntAPPRIS ALT2 TSL 5 BASIC6.91□□□□□ -1.3
Retrieved 100 of 98,524 protein–RNA pairs in 89.4 ms