Protein–RNA interactions for Protein: P05538

HLA-DQB2, HLA class II histocompatibility antigen, DQ beta 2 chain, humanhuman

Predictions only

Length 268 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB2P05538 UGT2A2-202ENST00000604629 1676 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
HLA-DQB2P05538 ANKRD49-208ENST00000544253 3002 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
HLA-DQB2P05538 DIAPH3-208ENST00000498416 2249 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
HLA-DQB2P05538 MAPKAPK5P1-201ENST00000431810 1376 ntBASIC5.68□□□□□ -1.5
HLA-DQB2P05538 AC078880.4-201ENST00000617627 1749 ntBASIC5.68□□□□□ -1.5
HLA-DQB2P05538 LINC02019-201ENST00000608605 2060 ntBASIC5.68□□□□□ -1.5
HLA-DQB2P05538 NDRG3-201ENST00000349004 2964 ntAPPRIS P4 TSL 1 (best) BASIC5.68□□□□□ -1.5
HLA-DQB2P05538 AQP9-202ENST00000536493 2803 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
HLA-DQB2P05538 AC013268.3-201ENST00000262716 2324 ntBASIC5.68□□□□□ -1.5
HLA-DQB2P05538 IFIT1B-201ENST00000371809 1972 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
HLA-DQB2P05538 RNA5SP514-201ENST00000363717 111 ntBASIC5.68□□□□□ -1.5
HLA-DQB2P05538 RN7SKP15-201ENST00000364742 309 ntBASIC5.68□□□□□ -1.5
HLA-DQB2P05538 G6PC2-202ENST00000375363 1214 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
HLA-DQB2P05538 CAPSL-201ENST00000397366 969 ntAPPRIS P1 TSL 3 BASIC5.68□□□□□ -1.5
HLA-DQB2P05538 CEACAM7-202ENST00000401731 1236 ntAPPRIS P1 TSL 2 BASIC5.68□□□□□ -1.5
HLA-DQB2P05538 Z98742.1-201ENST00000419801 632 ntTSL 3 BASIC5.68□□□□□ -1.5
HLA-DQB2P05538 RPL34P3-201ENST00000421454 338 ntBASIC5.68□□□□□ -1.5
HLA-DQB2P05538 GUSBP6-201ENST00000434932 640 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
HLA-DQB2P05538 AC099670.2-201ENST00000435130 321 ntBASIC5.68□□□□□ -1.5
HLA-DQB2P05538 RPL36AP39-201ENST00000445859 318 ntBASIC5.68□□□□□ -1.5
HLA-DQB2P05538 VDAC2P4-201ENST00000452925 711 ntBASIC5.68□□□□□ -1.5
HLA-DQB2P05538 AL158825.2-201ENST00000455336 670 ntTSL 5 BASIC5.68□□□□□ -1.5
HLA-DQB2P05538 NXT1P1-201ENST00000458481 316 ntBASIC5.68□□□□□ -1.5
HLA-DQB2P05538 RN7SL583P-201ENST00000475692 287 ntBASIC5.68□□□□□ -1.5
HLA-DQB2P05538 AC008517.1-201ENST00000502383 585 ntTSL 4 BASIC5.68□□□□□ -1.5
HLA-DQB2P05538 AC109481.1-201ENST00000509173 282 ntBASIC5.68□□□□□ -1.5
HLA-DQB2P05538 AC062004.1-202ENST00000524014 246 ntTSL 5 BASIC5.68□□□□□ -1.5
HLA-DQB2P05538 AC135626.1-201ENST00000556983 435 ntBASIC5.68□□□□□ -1.5
HLA-DQB2P05538 AC104996.1-201ENST00000583250 591 ntTSL 5 BASIC5.68□□□□□ -1.5
HLA-DQB2P05538 AC008521.2-201ENST00000591021 259 ntBASIC5.68□□□□□ -1.5
HLA-DQB2P05538 ZNF667-AS1-207ENST00000592146 668 ntTSL 5 BASIC5.68□□□□□ -1.5
HLA-DQB2P05538 AC025278.1-201ENST00000593558 515 ntTSL 2 BASIC5.68□□□□□ -1.5
HLA-DQB2P05538 AC012564.1-201ENST00000636802 557 ntTSL 4 BASIC5.68□□□□□ -1.5
HLA-DQB2P05538 NRG3-202ENST00000372142 3136 ntAPPRIS ALT2 TSL 1 (best) BASIC5.68□□□□□ -1.5
HLA-DQB2P05538 AC015799.1-201ENST00000622996 3122 ntBASIC5.68□□□□□ -1.5
HLA-DQB2P05538 AL050403.1-201ENST00000448859 2006 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
HLA-DQB2P05538 SETD2-202ENST00000409792 8142 ntAPPRIS P1 TSL 5 BASIC5.68□□□□□ -1.5
HLA-DQB2P05538 KYAT3-203ENST00000370491 1868 ntAPPRIS ALT1 TSL 2 BASIC5.68□□□□□ -1.5
HLA-DQB2P05538 TRIQK-206ENST00000518748 3563 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
HLA-DQB2P05538 RNMT-201ENST00000262173 6051 ntAPPRIS P1 TSL 2 BASIC5.68□□□□□ -1.5
HLA-DQB2P05538 LINC02401-201ENST00000550185 3059 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
HLA-DQB2P05538 ARHGAP20-204ENST00000528829 5880 ntAPPRIS ALT2 TSL 1 (best) BASIC5.68□□□□□ -1.5
HLA-DQB2P05538 SLC12A1-201ENST00000330289 1764 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
HLA-DQB2P05538 AIG1-208ENST00000494282 3393 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
HLA-DQB2P05538 AQP9-201ENST00000219919 3034 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
HLA-DQB2P05538 AC144833.1-201ENST00000567953 4089 ntBASIC5.67□□□□□ -1.5
HLA-DQB2P05538 RYR2-201ENST00000360064 14850 ntAPPRIS ALT2 TSL 5 BASIC5.67□□□□□ -1.5
HLA-DQB2P05538 MOSPD2-201ENST00000380492 4163 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
HLA-DQB2P05538 MAPRE2-202ENST00000413393 4173 ntAPPRIS ALT1 TSL 5 BASIC5.67□□□□□ -1.5
HLA-DQB2P05538 RABGAP1L-208ENST00000392064 6282 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
HLA-DQB2P05538 AC006206.1-201ENST00000544842 3387 ntBASIC5.67□□□□□ -1.5
HLA-DQB2P05538 GABRG3-201ENST00000333743 1235 ntTSL 5 BASIC5.67□□□□□ -1.5
HLA-DQB2P05538 CLEC4A-204ENST00000360500 597 ntTSL 5 BASIC5.67□□□□□ -1.5
HLA-DQB2P05538 RNA5SP46-201ENST00000362370 120 ntBASIC5.67□□□□□ -1.5
HLA-DQB2P05538 RN7SKP185-201ENST00000362813 326 ntBASIC5.67□□□□□ -1.5
HLA-DQB2P05538 AL009179.1-201ENST00000406085 265 ntBASIC5.67□□□□□ -1.5
HLA-DQB2P05538 SYCE3-202ENST00000406915 448 ntAPPRIS P1 TSL 2 BASIC5.67□□□□□ -1.5
HLA-DQB2P05538 OR2A25-201ENST00000408898 1014 ntAPPRIS P1 BASIC5.67□□□□□ -1.5
HLA-DQB2P05538 AL596448.1-201ENST00000415024 392 ntBASIC5.67□□□□□ -1.5
HLA-DQB2P05538 AC008060.2-201ENST00000415333 468 ntTSL 3 BASIC5.67□□□□□ -1.5
HLA-DQB2P05538 AL445190.1-201ENST00000416448 288 ntTSL 5 BASIC5.67□□□□□ -1.5
HLA-DQB2P05538 AL390243.1-201ENST00000422038 708 ntTSL 2 BASIC5.67□□□□□ -1.5
HLA-DQB2P05538 C9orf57-202ENST00000424431 1297 ntAPPRIS ALT2 TSL 1 (best) BASIC5.67□□□□□ -1.5
HLA-DQB2P05538 AC079807.1-201ENST00000429993 481 ntBASIC5.67□□□□□ -1.5
HLA-DQB2P05538 FMO7P-201ENST00000436045 768 ntBASIC5.67□□□□□ -1.5
HLA-DQB2P05538 LDHAP2-201ENST00000437325 985 ntBASIC5.67□□□□□ -1.5
HLA-DQB2P05538 Z84478.1-201ENST00000438230 1219 ntBASIC5.67□□□□□ -1.5
HLA-DQB2P05538 AC064862.4-201ENST00000442180 334 ntBASIC5.67□□□□□ -1.5
HLA-DQB2P05538 LINC02271-202ENST00000506379 596 ntTSL 4 BASIC5.67□□□□□ -1.5
HLA-DQB2P05538 AC138866.2-201ENST00000508650 584 ntBASIC5.67□□□□□ -1.5
HLA-DQB2P05538 AC090568.1-201ENST00000509499 856 ntBASIC5.67□□□□□ -1.5
HLA-DQB2P05538 IGKV2-19-201ENST00000518132 283 ntBASIC5.67□□□□□ -1.5
HLA-DQB2P05538 AC008705.1-201ENST00000518837 489 ntTSL 3 BASIC5.67□□□□□ -1.5
HLA-DQB2P05538 OR5AM1P-201ENST00000532136 1032 ntBASIC5.67□□□□□ -1.5
HLA-DQB2P05538 ASB8-202ENST00000535055 657 ntTSL 2 BASIC5.67□□□□□ -1.5
HLA-DQB2P05538 MYL6-213ENST00000549017 502 ntTSL 3 BASIC5.67□□□□□ -1.5
HLA-DQB2P05538 MRPS21P7-201ENST00000566937 238 ntBASIC5.67□□□□□ -1.5
HLA-DQB2P05538 OCLM-201ENST00000574641 884 ntAPPRIS P1 BASIC5.67□□□□□ -1.5
HLA-DQB2P05538 MRO-208ENST00000588444 866 ntTSL 3 BASIC5.67□□□□□ -1.5
HLA-DQB2P05538 PPATP2-201ENST00000605635 508 ntBASIC5.67□□□□□ -1.5
HLA-DQB2P05538 C1orf195-202ENST00000625027 441 ntTSL 5 BASIC5.67□□□□□ -1.5
HLA-DQB2P05538 AC008691.1-209ENST00000642094 814 ntBASIC5.67□□□□□ -1.5
HLA-DQB2P05538 KCNJ1-204ENST00000392665 4074 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
HLA-DQB2P05538 PSG9-202ENST00000270077 1705 ntAPPRIS P2 TSL 1 (best) BASIC5.67□□□□□ -1.5
HLA-DQB2P05538 IGF2BP2-AS1-202ENST00000456447 1531 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
HLA-DQB2P05538 AC009135.2-201ENST00000624136 1768 ntBASIC5.67□□□□□ -1.5
HLA-DQB2P05538 STMN2-201ENST00000220876 2223 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
HLA-DQB2P05538 AC007557.3-201ENST00000418591 3135 ntTSL 2 BASIC5.67□□□□□ -1.5
HLA-DQB2P05538 PSG7-201ENST00000406070 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC5.67□□□□□ -1.5
HLA-DQB2P05538 AC087258.1-203ENST00000545400 1629 ntTSL 2 BASIC5.66□□□□□ -1.5
HLA-DQB2P05538 POC1B-201ENST00000313546 3001 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
HLA-DQB2P05538 PEX26-201ENST00000329627 18445 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
HLA-DQB2P05538 NAT1-208ENST00000520546 1446 ntAPPRIS P1 BASIC5.66□□□□□ -1.5
HLA-DQB2P05538 DDX58-201ENST00000379868 4089 ntTSL 5 BASIC5.66□□□□□ -1.5
HLA-DQB2P05538 NDUFS1-207ENST00000455934 3361 ntTSL 2 BASIC5.66□□□□□ -1.5
HLA-DQB2P05538 SYCP2L-207ENST00000543878 2436 ntAPPRIS ALT2 TSL 5 BASIC5.66□□□□□ -1.5
HLA-DQB2P05538 TTC41P-205ENST00000551270 3963 ntBASIC5.66□□□□□ -1.5
HLA-DQB2P05538 CUL4B-204ENST00000404115 3264 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
HLA-DQB2P05538 UGDH-205ENST00000506179 3021 ntAPPRIS P1 TSL 5 BASIC5.66□□□□□ -1.5
HLA-DQB2P05538 PATL1-201ENST00000300146 4072 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 119.5 ms