Protein–RNA interactions for Protein: Q9Z1X9

Cdc45, Cell division control protein 45 homolog, mousemouse

Predictions only

Length 566 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdc45Q9Z1X9 Igsf11-201ENSMUST00000023478 3443 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Cdc45Q9Z1X9 Irgc1-204ENSMUST00000205776 1835 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Cdc45Q9Z1X9 Pdcd5-202ENSMUST00000120714 767 ntTSL 3 BASIC19.68■□□□□ 0.74
Cdc45Q9Z1X9 Gm13647-201ENSMUST00000154654 622 ntTSL 5 BASIC19.68■□□□□ 0.74
Cdc45Q9Z1X9 Slc25a41-202ENSMUST00000169012 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Cdc45Q9Z1X9 Pih1d2-201ENSMUST00000000171 1256 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Cdc45Q9Z1X9 Gm42884-202ENSMUST00000202523 423 ntTSL 3 BASIC19.68■□□□□ 0.74
Cdc45Q9Z1X9 Rgcc-201ENSMUST00000022595 918 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Cdc45Q9Z1X9 Purg-201ENSMUST00000070340 1064 ntAPPRIS P1 BASIC19.68■□□□□ 0.74
Cdc45Q9Z1X9 Tmem131l-201ENSMUST00000052342 4815 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
Cdc45Q9Z1X9 Spock1-201ENSMUST00000172326 1320 ntAPPRIS P3 TSL 5 BASIC19.68■□□□□ 0.74
Cdc45Q9Z1X9 Cul4a-201ENSMUST00000016680 3728 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Cdc45Q9Z1X9 Gm11841-201ENSMUST00000117060 1963 ntBASIC19.68■□□□□ 0.74
Cdc45Q9Z1X9 Kdm5b-203ENSMUST00000112198 5413 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Cdc45Q9Z1X9 Mta3-203ENSMUST00000112350 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Cdc45Q9Z1X9 Fam131b-201ENSMUST00000031891 4065 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Cdc45Q9Z1X9 Edn2-201ENSMUST00000030384 1462 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Cdc45Q9Z1X9 Kdelr2-201ENSMUST00000110731 1829 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Cdc45Q9Z1X9 Nsmf-201ENSMUST00000006646 2922 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
Cdc45Q9Z1X9 Krt6a-201ENSMUST00000023788 2256 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Cdc45Q9Z1X9 Npm3-ps1-201ENSMUST00000119728 528 ntBASIC19.67■□□□□ 0.74
Cdc45Q9Z1X9 Gm17949-201ENSMUST00000210548 1179 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
Cdc45Q9Z1X9 Gm30025-201ENSMUST00000218555 728 ntBASIC19.67■□□□□ 0.74
Cdc45Q9Z1X9 Fgf8-202ENSMUST00000026241 1168 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Cdc45Q9Z1X9 Npm3-201ENSMUST00000070215 888 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Cdc45Q9Z1X9 Odf1-201ENSMUST00000081966 1105 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Cdc45Q9Z1X9 Kcnn2-208ENSMUST00000211323 2046 ntAPPRIS P2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Cdc45Q9Z1X9 Cadps2-212ENSMUST00000163871 4969 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
Cdc45Q9Z1X9 Dok7-202ENSMUST00000101298 2443 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Cdc45Q9Z1X9 Dnajc19-201ENSMUST00000011029 2499 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Cdc45Q9Z1X9 Farsa-202ENSMUST00000109754 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Cdc45Q9Z1X9 Zbtb22-201ENSMUST00000053429 2611 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Cdc45Q9Z1X9 Gm27029-201ENSMUST00000107257 1898 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
Cdc45Q9Z1X9 Ldb1-205ENSMUST00000137771 2014 ntTSL 5 BASIC19.66■□□□□ 0.74
Cdc45Q9Z1X9 Shroom3-201ENSMUST00000113051 6435 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Cdc45Q9Z1X9 Gm5414-201ENSMUST00000062879 1659 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
Cdc45Q9Z1X9 Aifm1-201ENSMUST00000037349 2237 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
Cdc45Q9Z1X9 Rnf128-201ENSMUST00000113026 2750 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Cdc45Q9Z1X9 Acaa1a-201ENSMUST00000039784 1762 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Cdc45Q9Z1X9 Hilpda-202ENSMUST00000115289 658 ntAPPRIS P1 TSL 3 BASIC19.66■□□□□ 0.74
Cdc45Q9Z1X9 2210408F21Rik-211ENSMUST00000151800 750 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Cdc45Q9Z1X9 Khdc3-204ENSMUST00000173734 1228 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Cdc45Q9Z1X9 Gm45709-201ENSMUST00000213052 1075 ntTSL 5 BASIC19.66■□□□□ 0.74
Cdc45Q9Z1X9 Tmem270-201ENSMUST00000047305 932 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Cdc45Q9Z1X9 Pfdn4-201ENSMUST00000063682 935 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Cdc45Q9Z1X9 Olfr464-201ENSMUST00000074874 1084 ntAPPRIS P1 BASIC19.66■□□□□ 0.74
Cdc45Q9Z1X9 Dag1-201ENSMUST00000080435 4364 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Cdc45Q9Z1X9 Enoph1-202ENSMUST00000169390 1833 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Cdc45Q9Z1X9 Lrrc47-205ENSMUST00000169622 3468 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Cdc45Q9Z1X9 Krt81-201ENSMUST00000061185 1857 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Cdc45Q9Z1X9 4933428P19Rik-201ENSMUST00000199616 1376 ntBASIC19.66■□□□□ 0.74
Cdc45Q9Z1X9 Htr5b-201ENSMUST00000055884 1935 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Cdc45Q9Z1X9 A930017K11Rik-201ENSMUST00000162431 2539 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Cdc45Q9Z1X9 Cdk12-203ENSMUST00000107539 5912 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
Cdc45Q9Z1X9 Camsap2-203ENSMUST00000192314 4916 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Cdc45Q9Z1X9 Fam109a-203ENSMUST00000198271 2335 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Cdc45Q9Z1X9 Gm26592-201ENSMUST00000180870 1730 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Cdc45Q9Z1X9 Sec61a1-201ENSMUST00000032168 3172 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Cdc45Q9Z1X9 Polr3e-203ENSMUST00000207481 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Cdc45Q9Z1X9 Rhobtb2-201ENSMUST00000022665 5322 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Cdc45Q9Z1X9 Ptf1aos-201ENSMUST00000122978 916 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Cdc45Q9Z1X9 Ripply2-201ENSMUST00000058846 503 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Cdc45Q9Z1X9 Mpst-203ENSMUST00000169133 1309 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
Cdc45Q9Z1X9 Gm45244-201ENSMUST00000211328 2200 ntBASIC19.65■□□□□ 0.74
Cdc45Q9Z1X9 Fndc11-201ENSMUST00000050026 1387 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Cdc45Q9Z1X9 Trim25-202ENSMUST00000100627 1433 ntTSL 5 BASIC19.65■□□□□ 0.74
Cdc45Q9Z1X9 E030042O20Rik-201ENSMUST00000135244 1427 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Cdc45Q9Z1X9 Ran-201ENSMUST00000031383 2377 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Cdc45Q9Z1X9 Asph-204ENSMUST00000084915 2884 ntTSL 5 BASIC19.64■□□□□ 0.73
Cdc45Q9Z1X9 Gm12979-201ENSMUST00000145488 405 ntTSL 2 BASIC19.64■□□□□ 0.73
Cdc45Q9Z1X9 BC048679-201ENSMUST00000073406 522 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.73
Cdc45Q9Z1X9 Doc2g-201ENSMUST00000025806 1446 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Cdc45Q9Z1X9 1700096K18Rik-201ENSMUST00000188465 1454 ntBASIC19.64■□□□□ 0.73
Cdc45Q9Z1X9 Dap-201ENSMUST00000044524 1555 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Cdc45Q9Z1X9 Gm16861-201ENSMUST00000181498 1647 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Cdc45Q9Z1X9 Atp6v1c1-201ENSMUST00000022904 2071 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Cdc45Q9Z1X9 Sh3gl2-203ENSMUST00000107188 2286 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Cdc45Q9Z1X9 Pex6-201ENSMUST00000002840 3200 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Cdc45Q9Z1X9 Zfand5-201ENSMUST00000025659 2834 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Cdc45Q9Z1X9 Tfdp2-206ENSMUST00000185644 2646 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
Cdc45Q9Z1X9 Yipf2-202ENSMUST00000078572 1894 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Cdc45Q9Z1X9 Sfrp4-201ENSMUST00000002883 1764 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Cdc45Q9Z1X9 Ing4-205ENSMUST00000140131 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Cdc45Q9Z1X9 Ankrd17-203ENSMUST00000168058 9311 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
Cdc45Q9Z1X9 Gm14114-201ENSMUST00000139345 287 ntTSL 3 BASIC19.63■□□□□ 0.73
Cdc45Q9Z1X9 Tpsg1-202ENSMUST00000160377 1040 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Cdc45Q9Z1X9 Gm3264-202ENSMUST00000166776 882 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
Cdc45Q9Z1X9 Gm20472-201ENSMUST00000174403 1240 ntBASIC19.63■□□□□ 0.73
Cdc45Q9Z1X9 Snrnp48-202ENSMUST00000178564 847 ntTSL 5 BASIC19.63■□□□□ 0.73
Cdc45Q9Z1X9 Gng11-201ENSMUST00000031670 919 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Cdc45Q9Z1X9 Zswim8-201ENSMUST00000022358 6073 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Cdc45Q9Z1X9 Rbm12b1-202ENSMUST00000069128 3069 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Cdc45Q9Z1X9 Rala-201ENSMUST00000009003 2688 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Cdc45Q9Z1X9 Relb-201ENSMUST00000049912 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Cdc45Q9Z1X9 Ppp2r1b-204ENSMUST00000174628 2195 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Cdc45Q9Z1X9 Ubfd1-201ENSMUST00000033158 4849 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Cdc45Q9Z1X9 Gm3488-202ENSMUST00000181562 1945 ntAPPRIS P5 TSL 5 BASIC19.63■□□□□ 0.73
Cdc45Q9Z1X9 Yipf2-204ENSMUST00000213809 1883 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Cdc45Q9Z1X9 March3-202ENSMUST00000102912 1754 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Cdc45Q9Z1X9 Fbrsl1-202ENSMUST00000069483 4720 ntAPPRIS P2 TSL 5 BASIC19.62■□□□□ 0.73
Retrieved 100 of 76,532 protein–RNA pairs in 33.6 ms