Protein–RNA interactions for Protein: Q9R0X5

Rpgr, X-linked retinitis pigmentosa GTPase regulator, mousemouse

Predictions only

Length 1,001 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RpgrQ9R0X5 Cdk2ap2-201ENSMUST00000025779 1080 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
RpgrQ9R0X5 Cck-201ENSMUST00000035120 691 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
RpgrQ9R0X5 Thap3-201ENSMUST00000036680 1124 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
RpgrQ9R0X5 Col4a3bp-203ENSMUST00000179226 3040 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
RpgrQ9R0X5 Ankrd44-210ENSMUST00000179030 6140 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
RpgrQ9R0X5 Fancg-201ENSMUST00000030165 2771 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
RpgrQ9R0X5 Ankrd39-201ENSMUST00000001172 2109 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
RpgrQ9R0X5 Snph-203ENSMUST00000109875 4910 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
RpgrQ9R0X5 Psmd4-202ENSMUST00000107237 1332 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
RpgrQ9R0X5 Ralgapa1-201ENSMUST00000085385 7901 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
RpgrQ9R0X5 Dancr-204ENSMUST00000132389 2347 ntBASIC17.18■□□□□ 0.34
RpgrQ9R0X5 Gm10532-201ENSMUST00000181913 2301 ntTSL 2 BASIC17.18■□□□□ 0.34
RpgrQ9R0X5 4930432B10Rik-202ENSMUST00000181330 1612 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
RpgrQ9R0X5 Pmpcb-201ENSMUST00000030882 1615 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
RpgrQ9R0X5 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
RpgrQ9R0X5 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
RpgrQ9R0X5 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
RpgrQ9R0X5 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
RpgrQ9R0X5 Negr1-201ENSMUST00000041425 2095 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
RpgrQ9R0X5 Lsm6-201ENSMUST00000051867 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
RpgrQ9R0X5 Anapc2-201ENSMUST00000028341 3004 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
RpgrQ9R0X5 Rac1-202ENSMUST00000100489 2325 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
RpgrQ9R0X5 Nipal3-201ENSMUST00000102549 5153 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
RpgrQ9R0X5 Gm15723-201ENSMUST00000139331 600 ntTSL 3 BASIC17.17■□□□□ 0.34
RpgrQ9R0X5 Gm6576-201ENSMUST00000169678 883 ntBASIC17.17■□□□□ 0.34
RpgrQ9R0X5 Smim10l1-204ENSMUST00000191462 574 ntTSL 3 BASIC17.17■□□□□ 0.34
RpgrQ9R0X5 Ppic-201ENSMUST00000025419 1286 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
RpgrQ9R0X5 Wisp2-201ENSMUST00000029188 1719 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
RpgrQ9R0X5 Cfap20-201ENSMUST00000034249 1295 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
RpgrQ9R0X5 Tapt1-201ENSMUST00000055128 3513 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
RpgrQ9R0X5 Mff-202ENSMUST00000078332 1894 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
RpgrQ9R0X5 Gpr84-201ENSMUST00000079824 1550 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
RpgrQ9R0X5 Pacs1-201ENSMUST00000025786 4339 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
RpgrQ9R0X5 Kcnn1-201ENSMUST00000110078 4047 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
RpgrQ9R0X5 Kcnn1-202ENSMUST00000110081 4045 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
RpgrQ9R0X5 Slc44a1-201ENSMUST00000102911 3102 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
RpgrQ9R0X5 Chd4-202ENSMUST00000112390 6537 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
RpgrQ9R0X5 Rd3-201ENSMUST00000175680 1969 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
RpgrQ9R0X5 Spata6-201ENSMUST00000038868 2466 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
RpgrQ9R0X5 Zc3h14-203ENSMUST00000110104 3146 ntTSL 5 BASIC17.16■□□□□ 0.34
RpgrQ9R0X5 Plppr5-202ENSMUST00000106473 4294 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
RpgrQ9R0X5 Senp3-202ENSMUST00000066760 2219 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
RpgrQ9R0X5 Retreg1-201ENSMUST00000022881 3248 ntTSL 5 BASIC17.16■□□□□ 0.34
RpgrQ9R0X5 Shank3-201ENSMUST00000039074 7131 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
RpgrQ9R0X5 Ankrd13b-201ENSMUST00000037593 3105 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
RpgrQ9R0X5 Rgs19-207ENSMUST00000108779 642 ntTSL 5 BASIC17.16■□□□□ 0.34
RpgrQ9R0X5 Zfp428-203ENSMUST00000177205 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
RpgrQ9R0X5 Gm43183-201ENSMUST00000200632 547 ntBASIC17.16■□□□□ 0.34
RpgrQ9R0X5 Plpp1-202ENSMUST00000070951 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
RpgrQ9R0X5 Mfap2-201ENSMUST00000071977 1073 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
RpgrQ9R0X5 Ly6g6d-201ENSMUST00000007259 546 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
RpgrQ9R0X5 Ctnna2-204ENSMUST00000160894 4162 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
RpgrQ9R0X5 Klc3-202ENSMUST00000108457 1632 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
RpgrQ9R0X5 Meis2-202ENSMUST00000074285 2844 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
RpgrQ9R0X5 Dmrt2-201ENSMUST00000053068 2347 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
RpgrQ9R0X5 Sprn-201ENSMUST00000059241 3374 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
RpgrQ9R0X5 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
RpgrQ9R0X5 Agap1-204ENSMUST00000190096 4078 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
RpgrQ9R0X5 Brpf1-202ENSMUST00000113119 4826 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
RpgrQ9R0X5 Arhgef12-202ENSMUST00000165665 10752 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
RpgrQ9R0X5 Mon1b-201ENSMUST00000035777 4998 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
RpgrQ9R0X5 Klhdc8b-210ENSMUST00000193895 2718 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
RpgrQ9R0X5 Mxd4-201ENSMUST00000042701 3872 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
RpgrQ9R0X5 1700041G16Rik-202ENSMUST00000186344 1824 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
RpgrQ9R0X5 Sco1-201ENSMUST00000092996 2412 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
RpgrQ9R0X5 Gm10698-201ENSMUST00000182663 604 ntBASIC17.15■□□□□ 0.34
RpgrQ9R0X5 Gm37292-201ENSMUST00000192062 758 ntBASIC17.15■□□□□ 0.34
RpgrQ9R0X5 Arhgef33-211ENSMUST00000225658 473 ntBASIC17.15■□□□□ 0.34
RpgrQ9R0X5 Tm7sf2-202ENSMUST00000113543 1498 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
RpgrQ9R0X5 Gm43808-201ENSMUST00000202534 2065 ntBASIC17.15■□□□□ 0.34
RpgrQ9R0X5 Zfp691-201ENSMUST00000052715 2341 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
RpgrQ9R0X5 Clk4-201ENSMUST00000093132 1949 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
RpgrQ9R0X5 Lat2-202ENSMUST00000077636 1717 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
RpgrQ9R0X5 Tsc22d2-201ENSMUST00000099090 9799 ntAPPRIS P3 TSL 3 BASIC17.15■□□□□ 0.34
RpgrQ9R0X5 Zbtb32-202ENSMUST00000108151 1775 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
RpgrQ9R0X5 Nid1-201ENSMUST00000005532 6091 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
RpgrQ9R0X5 Ankrd44-201ENSMUST00000044359 6192 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
RpgrQ9R0X5 Trap1-201ENSMUST00000006137 2320 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
RpgrQ9R0X5 Erlin1-201ENSMUST00000071698 3228 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
RpgrQ9R0X5 Sipa1l1-202ENSMUST00000166429 8215 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
RpgrQ9R0X5 Arntl-201ENSMUST00000047321 2908 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
RpgrQ9R0X5 Chrna4-201ENSMUST00000067120 4565 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
RpgrQ9R0X5 D16Ertd472e-203ENSMUST00000114220 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
RpgrQ9R0X5 Susd1-202ENSMUST00000107544 3220 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
RpgrQ9R0X5 Ankrd13a-201ENSMUST00000102578 3717 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
RpgrQ9R0X5 Appbp2-201ENSMUST00000018625 6463 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
RpgrQ9R0X5 Slc26a10-205ENSMUST00000222911 3067 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
RpgrQ9R0X5 Prkra-201ENSMUST00000002808 1614 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
RpgrQ9R0X5 Ccdc124-201ENSMUST00000007865 1356 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
RpgrQ9R0X5 Chmp4c-201ENSMUST00000029049 6188 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
RpgrQ9R0X5 Ppm1h-206ENSMUST00000161487 2931 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
RpgrQ9R0X5 Capg-202ENSMUST00000114071 1400 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
RpgrQ9R0X5 Fam181a-201ENSMUST00000179363 1406 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
RpgrQ9R0X5 Odf2-211ENSMUST00000113767 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
RpgrQ9R0X5 Rpf1-203ENSMUST00000199079 1978 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
RpgrQ9R0X5 Gxylt2-201ENSMUST00000032157 7658 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
RpgrQ9R0X5 Sh2b1-202ENSMUST00000205340 3366 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
RpgrQ9R0X5 Klf5-201ENSMUST00000005279 3352 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
RpgrQ9R0X5 Atox1-201ENSMUST00000108857 541 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
RpgrQ9R0X5 Igflr1-202ENSMUST00000172251 1224 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 20 ms