Protein–RNA interactions for Protein: Q9R049

Amfr, E3 ubiquitin-protein ligase AMFR, mousemouse

Predictions only

Length 643 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AmfrQ9R049 Zfp64-202ENSMUST00000109161 1009 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
AmfrQ9R049 Josd2-206ENSMUST00000121922 684 ntTSL 5 BASIC18.92■□□□□ 0.62
AmfrQ9R049 D330023K18Rik-201ENSMUST00000133550 920 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
AmfrQ9R049 Sct-202ENSMUST00000167790 507 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
AmfrQ9R049 Gm19426-201ENSMUST00000181711 726 ntAPPRIS P1 TSL 2 BASIC18.92■□□□□ 0.62
AmfrQ9R049 Krtap5-1-202ENSMUST00000188274 742 ntBASIC18.92■□□□□ 0.62
AmfrQ9R049 Gm38027-201ENSMUST00000192315 235 ntBASIC18.92■□□□□ 0.62
AmfrQ9R049 Sct-201ENSMUST00000046156 534 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
AmfrQ9R049 Sh2b1-203ENSMUST00000205440 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
AmfrQ9R049 Lsm1-201ENSMUST00000038421 2663 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
AmfrQ9R049 Sco1-201ENSMUST00000092996 2412 ntAPPRIS P2 TSL 1 (best) BASIC18.92■□□□□ 0.62
AmfrQ9R049 Sh3yl1-202ENSMUST00000110880 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
AmfrQ9R049 Mrpl9-201ENSMUST00000029786 1612 ntAPPRIS P2 TSL 1 (best) BASIC18.92■□□□□ 0.62
AmfrQ9R049 Adam33-201ENSMUST00000052104 2795 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
AmfrQ9R049 Ppan-201ENSMUST00000004203 1670 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
AmfrQ9R049 Plekhh3-201ENSMUST00000043397 3056 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
AmfrQ9R049 Ube2d3-202ENSMUST00000166033 2504 ntAPPRIS P2 TSL 1 (best) BASIC18.92■□□□□ 0.62
AmfrQ9R049 Cdc42ep3-201ENSMUST00000068958 1967 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
AmfrQ9R049 Zmynd15-203ENSMUST00000108563 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
AmfrQ9R049 4833418N02Rik-202ENSMUST00000146560 1495 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
AmfrQ9R049 Cnot9-201ENSMUST00000087215 3268 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
AmfrQ9R049 Pld2-203ENSMUST00000108557 3655 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
AmfrQ9R049 Zdhhc6-207ENSMUST00000224897 2168 ntAPPRIS P1 BASIC18.91■□□□□ 0.62
AmfrQ9R049 Snx25-203ENSMUST00000110378 3445 ntAPPRIS ALT2 TSL 5 BASIC18.91■□□□□ 0.62
AmfrQ9R049 Tnfsf14-201ENSMUST00000005976 1859 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
AmfrQ9R049 Krt81-201ENSMUST00000061185 1857 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
AmfrQ9R049 Slc25a51-203ENSMUST00000132815 1005 ntAPPRIS P1 TSL 2 BASIC18.91■□□□□ 0.62
AmfrQ9R049 Gm13816-201ENSMUST00000152230 715 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
AmfrQ9R049 2210408F21Rik-213ENSMUST00000153057 652 ntTSL 3 BASIC18.91■□□□□ 0.62
AmfrQ9R049 Ccnd2-204ENSMUST00000201637 1006 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
AmfrQ9R049 Tpsg1-201ENSMUST00000024999 1186 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
AmfrQ9R049 Snapc3-202ENSMUST00000071544 942 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
AmfrQ9R049 Srrm2-209ENSMUST00000190686 8864 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
AmfrQ9R049 Tbx3os2-201ENSMUST00000135385 1345 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
AmfrQ9R049 Rcbtb2-226ENSMUST00000171767 2692 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
AmfrQ9R049 Cyp4f13-204ENSMUST00000139353 1389 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
AmfrQ9R049 Psmd6-201ENSMUST00000022256 1387 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
AmfrQ9R049 D17Wsu92e-203ENSMUST00000114863 3828 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
AmfrQ9R049 Mbp-201ENSMUST00000047865 2492 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
AmfrQ9R049 Fmr1-205ENSMUST00000114656 4257 ntTSL 5 BASIC18.91■□□□□ 0.62
AmfrQ9R049 Cxcl14-202ENSMUST00000224801 1467 ntBASIC18.9■□□□□ 0.62
AmfrQ9R049 2810425M01Rik-201ENSMUST00000180790 1850 ntTSL 5 BASIC18.9■□□□□ 0.62
AmfrQ9R049 Gm15743-202ENSMUST00000182690 1901 ntBASIC18.9■□□□□ 0.62
AmfrQ9R049 Negr1-203ENSMUST00000106065 1953 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
AmfrQ9R049 Cct8-201ENSMUST00000026704 2394 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
AmfrQ9R049 Nrn1-202ENSMUST00000122286 691 ntTSL 3 BASIC18.9■□□□□ 0.62
AmfrQ9R049 Gm16120-201ENSMUST00000127990 808 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
AmfrQ9R049 Gm17182-201ENSMUST00000163795 860 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
AmfrQ9R049 Ssr2-207ENSMUST00000195014 1059 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
AmfrQ9R049 Gm42884-202ENSMUST00000202523 423 ntTSL 3 BASIC18.9■□□□□ 0.62
AmfrQ9R049 Rps28-201ENSMUST00000087342 392 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
AmfrQ9R049 Mipep-201ENSMUST00000063562 3015 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
AmfrQ9R049 Tubb4b-ps1-201ENSMUST00000179460 1336 ntBASIC18.9■□□□□ 0.62
AmfrQ9R049 Fbxl15-201ENSMUST00000026256 1348 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
AmfrQ9R049 Ank1-203ENSMUST00000110688 7206 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
AmfrQ9R049 Yipf2-204ENSMUST00000213809 1883 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
AmfrQ9R049 Shank3-203ENSMUST00000109309 7365 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
AmfrQ9R049 Stk39-201ENSMUST00000102715 3536 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
AmfrQ9R049 Ldb1-205ENSMUST00000137771 2014 ntTSL 5 BASIC18.9■□□□□ 0.62
AmfrQ9R049 Rhof-201ENSMUST00000031401 2208 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
AmfrQ9R049 Snrnp48-201ENSMUST00000091641 1785 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
AmfrQ9R049 Echdc2-204ENSMUST00000116309 1238 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
AmfrQ9R049 2210408F21Rik-211ENSMUST00000151800 750 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
AmfrQ9R049 Utf1-201ENSMUST00000168457 1227 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
AmfrQ9R049 Gm9694-201ENSMUST00000193347 1189 ntBASIC18.89■□□□□ 0.61
AmfrQ9R049 Rps2-ps2-201ENSMUST00000194305 881 ntBASIC18.89■□□□□ 0.61
AmfrQ9R049 Gm29994-201ENSMUST00000195495 1193 ntBASIC18.89■□□□□ 0.61
AmfrQ9R049 Mrps28-201ENSMUST00000042148 783 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
AmfrQ9R049 Vps37d-202ENSMUST00000076203 1286 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
AmfrQ9R049 Rara-202ENSMUST00000107473 3238 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
AmfrQ9R049 Opa3-202ENSMUST00000161711 1390 ntAPPRIS ALT2 TSL 2 BASIC18.89■□□□□ 0.61
AmfrQ9R049 Itpripl2-201ENSMUST00000178344 6865 ntAPPRIS P1 BASIC18.89■□□□□ 0.61
AmfrQ9R049 Ddx41-204ENSMUST00000224765 2199 ntBASIC18.89■□□□□ 0.61
AmfrQ9R049 Abi1-215ENSMUST00000178908 2239 ntAPPRIS ALT1 TSL 5 BASIC18.89■□□□□ 0.61
AmfrQ9R049 9330151L19Rik-201ENSMUST00000181850 2545 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
AmfrQ9R049 Gprc5c-203ENSMUST00000122967 1709 ntTSL 5 BASIC18.88■□□□□ 0.61
AmfrQ9R049 Spdef-205ENSMUST00000167489 1708 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
AmfrQ9R049 Cacnb1-204ENSMUST00000107561 1778 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
AmfrQ9R049 Tia1-203ENSMUST00000095754 1789 ntAPPRIS ALT1 TSL 5 BASIC18.88■□□□□ 0.61
AmfrQ9R049 Ryr2-203ENSMUST00000220597 4924 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
AmfrQ9R049 Nectin3-202ENSMUST00000023335 9116 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
AmfrQ9R049 Asic2-201ENSMUST00000021045 3436 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
AmfrQ9R049 Gm13559-201ENSMUST00000120476 863 ntBASIC18.88■□□□□ 0.61
AmfrQ9R049 Gm24841-201ENSMUST00000158676 357 ntBASIC18.88■□□□□ 0.61
AmfrQ9R049 Gm43799-201ENSMUST00000201845 579 ntBASIC18.88■□□□□ 0.61
AmfrQ9R049 Gm34933-201ENSMUST00000203245 1067 ntTSL 5 BASIC18.88■□□□□ 0.61
AmfrQ9R049 Fxyd1-208ENSMUST00000205807 539 ntTSL 3 BASIC18.88■□□□□ 0.61
AmfrQ9R049 Casp3-203ENSMUST00000210534 583 ntTSL 5 BASIC18.88■□□□□ 0.61
AmfrQ9R049 Gm30025-201ENSMUST00000218555 728 ntBASIC18.88■□□□□ 0.61
AmfrQ9R049 Prss33-201ENSMUST00000059906 1360 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
AmfrQ9R049 Plekhh3-206ENSMUST00000164474 3010 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
AmfrQ9R049 Aig1-205ENSMUST00000162610 1554 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
AmfrQ9R049 Il17re-208ENSMUST00000204774 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
AmfrQ9R049 Eefsec-201ENSMUST00000165242 2679 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
AmfrQ9R049 Lrch3-203ENSMUST00000135193 2794 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
AmfrQ9R049 Zmynd19-201ENSMUST00000028350 3903 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
AmfrQ9R049 Nadk2-203ENSMUST00000100790 3665 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
AmfrQ9R049 Btbd11-203ENSMUST00000105307 5788 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
AmfrQ9R049 Cap1-202ENSMUST00000106255 2737 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
AmfrQ9R049 Unc13b-203ENSMUST00000107953 5034 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
Retrieved 100 of 76,532 protein–RNA pairs in 21.1 ms