Protein–RNA interactions for Protein: Q9P244

LRFN1, Leucine-rich repeat and fibronectin type III domain-containing protein 1, humanhuman

Predictions only

Length 771 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN1Q9P244 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC18.06■□□□□ 0.48
LRFN1Q9P244 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC18.06■□□□□ 0.48
LRFN1Q9P244 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
LRFN1Q9P244 CR392000.1-201ENST00000624770 1228 ntBASIC18.06■□□□□ 0.48
LRFN1Q9P244 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC18.06■□□□□ 0.48
LRFN1Q9P244 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
LRFN1Q9P244 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
LRFN1Q9P244 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
LRFN1Q9P244 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC18.06■□□□□ 0.48
LRFN1Q9P244 LINC02361-201ENST00000538731 1484 ntTSL 2 BASIC18.06■□□□□ 0.48
LRFN1Q9P244 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC18.06■□□□□ 0.48
LRFN1Q9P244 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC18.06■□□□□ 0.48
LRFN1Q9P244 AKR7A3-201ENST00000361640 1710 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
LRFN1Q9P244 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
LRFN1Q9P244 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
LRFN1Q9P244 INSR-201ENST00000302850 4721 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
LRFN1Q9P244 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
LRFN1Q9P244 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
LRFN1Q9P244 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC18.05■□□□□ 0.48
LRFN1Q9P244 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC18.05■□□□□ 0.48
LRFN1Q9P244 DHRS11-210ENST00000611337 1341 ntTSL 5 BASIC18.05■□□□□ 0.48
LRFN1Q9P244 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
LRFN1Q9P244 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC18.05■□□□□ 0.48
LRFN1Q9P244 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC18.05■□□□□ 0.48
LRFN1Q9P244 DNAL4-201ENST00000216068 1504 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
LRFN1Q9P244 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
LRFN1Q9P244 GDAP1L1-202ENST00000372952 722 ntTSL 5 BASIC18.05■□□□□ 0.48
LRFN1Q9P244 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC18.05■□□□□ 0.48
LRFN1Q9P244 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC18.05■□□□□ 0.48
LRFN1Q9P244 NUDT16P1-203ENST00000513809 620 ntBASIC18.05■□□□□ 0.48
LRFN1Q9P244 CDKN2A-213ENST00000579122 666 ntTSL 3 BASIC18.05■□□□□ 0.48
LRFN1Q9P244 LINC01023-201ENST00000606054 436 ntBASIC18.05■□□□□ 0.48
LRFN1Q9P244 WBP2-213ENST00000590221 1745 ntAPPRIS ALT1 TSL 3 BASIC18.05■□□□□ 0.48
LRFN1Q9P244 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC18.05■□□□□ 0.48
LRFN1Q9P244 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
LRFN1Q9P244 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
LRFN1Q9P244 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
LRFN1Q9P244 CEMP1-202ENST00000567119 1374 ntAPPRIS P2 BASIC18.04■□□□□ 0.48
LRFN1Q9P244 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC18.04■□□□□ 0.48
LRFN1Q9P244 BX119927.1-201ENST00000636596 1552 ntBASIC18.04■□□□□ 0.48
LRFN1Q9P244 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC18.04■□□□□ 0.48
LRFN1Q9P244 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
LRFN1Q9P244 ART5-203ENST00000397068 1504 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
LRFN1Q9P244 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
LRFN1Q9P244 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC18.04■□□□□ 0.48
LRFN1Q9P244 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
LRFN1Q9P244 CLDND2-201ENST00000291715 974 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
LRFN1Q9P244 VKORC1-202ENST00000319788 1077 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
LRFN1Q9P244 HPF1-201ENST00000393381 1230 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
LRFN1Q9P244 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC18.04■□□□□ 0.48
LRFN1Q9P244 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC18.04■□□□□ 0.48
LRFN1Q9P244 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC18.04■□□□□ 0.48
LRFN1Q9P244 TUBB8P6-201ENST00000436895 1288 ntBASIC18.04■□□□□ 0.48
LRFN1Q9P244 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
LRFN1Q9P244 C1QL1P1-201ENST00000568105 661 ntBASIC18.04■□□□□ 0.48
LRFN1Q9P244 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC18.04■□□□□ 0.48
LRFN1Q9P244 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC18.04■□□□□ 0.48
LRFN1Q9P244 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC18.04■□□□□ 0.48
LRFN1Q9P244 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
LRFN1Q9P244 KRT16P1-201ENST00000399124 1418 ntBASIC18.04■□□□□ 0.48
LRFN1Q9P244 SLC25A24-204ENST00000569674 2357 ntBASIC18.04■□□□□ 0.48
LRFN1Q9P244 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC18.04■□□□□ 0.48
LRFN1Q9P244 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
LRFN1Q9P244 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC18.04■□□□□ 0.48
LRFN1Q9P244 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC18.03■□□□□ 0.48
LRFN1Q9P244 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
LRFN1Q9P244 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
LRFN1Q9P244 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
LRFN1Q9P244 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
LRFN1Q9P244 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
LRFN1Q9P244 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
LRFN1Q9P244 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
LRFN1Q9P244 GOLGA6L3-201ENST00000507199 1679 ntBASIC18.03■□□□□ 0.48
LRFN1Q9P244 CEL-201ENST00000372080 2384 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
LRFN1Q9P244 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
LRFN1Q9P244 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC18.03■□□□□ 0.48
LRFN1Q9P244 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC18.03■□□□□ 0.48
LRFN1Q9P244 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC18.03■□□□□ 0.48
LRFN1Q9P244 ADCYAP1-202ENST00000450565 918 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
LRFN1Q9P244 KRT8P12-201ENST00000468527 998 ntTSL 2 BASIC18.03■□□□□ 0.48
LRFN1Q9P244 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC18.03■□□□□ 0.48
LRFN1Q9P244 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC18.03■□□□□ 0.48
LRFN1Q9P244 SLC6A6-208ENST00000621751 1252 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
LRFN1Q9P244 CCAR2-214ENST00000613179 1421 ntTSL 5 BASIC18.03■□□□□ 0.48
LRFN1Q9P244 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
LRFN1Q9P244 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC18.03■□□□□ 0.48
LRFN1Q9P244 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
LRFN1Q9P244 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC18.03■□□□□ 0.48
LRFN1Q9P244 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC18.03■□□□□ 0.48
LRFN1Q9P244 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC18.03■□□□□ 0.48
LRFN1Q9P244 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
LRFN1Q9P244 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
LRFN1Q9P244 AC073314.1-201ENST00000568729 2216 ntBASIC18.02■□□□□ 0.48
LRFN1Q9P244 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
LRFN1Q9P244 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC18.02■□□□□ 0.48
LRFN1Q9P244 PMF1-BGLAP-202ENST00000368276 852 ntTSL 3 BASIC18.02■□□□□ 0.48
LRFN1Q9P244 FUOM-203ENST00000368552 762 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
LRFN1Q9P244 AC087499.1-201ENST00000418141 1075 ntBASIC18.02■□□□□ 0.48
LRFN1Q9P244 KRT18P16-201ENST00000510337 1294 ntBASIC18.02■□□□□ 0.48
LRFN1Q9P244 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC18.02■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 29.2 ms