Protein–RNA interactions for Protein: Q91Y12

Pcdha8, Protocadherin alpha 8, mousemouse

Predictions only

Length 946 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha8Q91Y12 Mmd-202ENSMUST00000107887 1654 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Pcdha8Q91Y12 Ctu1-201ENSMUST00000038332 2475 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Pcdha8Q91Y12 Phb-204ENSMUST00000125172 1799 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Pcdha8Q91Y12 P2ry1-203ENSMUST00000193943 2203 ntAPPRIS P1 BASIC16.46■□□□□ 0.23
Pcdha8Q91Y12 Fhl1-203ENSMUST00000114769 2770 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Pcdha8Q91Y12 Gpr137b-201ENSMUST00000021738 2971 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Pcdha8Q91Y12 Klhl33-201ENSMUST00000164415 1602 ntTSL 5 BASIC16.46■□□□□ 0.23
Pcdha8Q91Y12 Fiz1-203ENSMUST00000167804 2637 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Pcdha8Q91Y12 Nmnat3-201ENSMUST00000112935 2166 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Pcdha8Q91Y12 A830018L16Rik-208ENSMUST00000171690 6158 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
Pcdha8Q91Y12 Fmr1-205ENSMUST00000114656 4257 ntTSL 5 BASIC16.46■□□□□ 0.23
Pcdha8Q91Y12 Impa1-204ENSMUST00000191670 1100 ntTSL 2 BASIC16.46■□□□□ 0.23
Pcdha8Q91Y12 Sae1-203ENSMUST00000210999 1254 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Pcdha8Q91Y12 Odf3b-204ENSMUST00000227834 930 ntBASIC16.46■□□□□ 0.23
Pcdha8Q91Y12 Id1-201ENSMUST00000038368 934 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Pcdha8Q91Y12 Dbn1-202ENSMUST00000109921 2378 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Pcdha8Q91Y12 Plekha4-206ENSMUST00000211155 2044 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
Pcdha8Q91Y12 Myo5b-201ENSMUST00000074157 6745 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Pcdha8Q91Y12 Adgrb2-204ENSMUST00000106015 4982 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Pcdha8Q91Y12 Plpp6-201ENSMUST00000045674 2859 ntAPPRIS P1 BASIC16.46■□□□□ 0.23
Pcdha8Q91Y12 Dgkz-202ENSMUST00000099709 3512 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
Pcdha8Q91Y12 D17Wsu92e-203ENSMUST00000114863 3828 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
Pcdha8Q91Y12 9330151L19Rik-201ENSMUST00000181850 2545 ntTSL 1 (best) BASIC16.46■□□□□ 0.22
Pcdha8Q91Y12 Usp49-201ENSMUST00000024779 8252 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
Pcdha8Q91Y12 Cdipt-201ENSMUST00000032920 1974 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
Pcdha8Q91Y12 Neurl1a-202ENSMUST00000111808 4157 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
Pcdha8Q91Y12 Gm26917-202ENSMUST00000192833 3329 ntBASIC16.45■□□□□ 0.22
Pcdha8Q91Y12 Cacna2d2-203ENSMUST00000164988 5542 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
Pcdha8Q91Y12 Sept10-203ENSMUST00000220156 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Pcdha8Q91Y12 Ldb1-205ENSMUST00000137771 2014 ntTSL 5 BASIC16.45■□□□□ 0.22
Pcdha8Q91Y12 Ets1-206ENSMUST00000184887 2107 ntTSL 5 BASIC16.45■□□□□ 0.22
Pcdha8Q91Y12 Kcnab3-201ENSMUST00000018614 2538 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Pcdha8Q91Y12 Clta-203ENSMUST00000107847 1121 ntTSL 5 BASIC16.45■□□□□ 0.22
Pcdha8Q91Y12 Nnat-205ENSMUST00000153739 1146 ntAPPRIS ALT1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Pcdha8Q91Y12 Nnat-206ENSMUST00000172487 404 ntTSL 5 BASIC16.45■□□□□ 0.22
Pcdha8Q91Y12 Tlx1os-201ENSMUST00000173437 620 ntTSL 3 BASIC16.45■□□□□ 0.22
Pcdha8Q91Y12 Prss21-201ENSMUST00000024928 1094 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Pcdha8Q91Y12 Tm2d1-201ENSMUST00000030292 952 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Pcdha8Q91Y12 Crabp1-201ENSMUST00000034830 802 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Pcdha8Q91Y12 Gm8909-202ENSMUST00000097335 1182 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
Pcdha8Q91Y12 Gabbr1-202ENSMUST00000172789 1460 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Pcdha8Q91Y12 Stx18-201ENSMUST00000031008 1471 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Pcdha8Q91Y12 Zkscan14-201ENSMUST00000031632 1967 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Pcdha8Q91Y12 Rgl2-201ENSMUST00000047503 3252 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Pcdha8Q91Y12 Slc27a4-201ENSMUST00000080065 4054 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Pcdha8Q91Y12 Ttc6-203ENSMUST00000172939 5782 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
Pcdha8Q91Y12 Ctsh-201ENSMUST00000034915 1617 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Pcdha8Q91Y12 Capzb-202ENSMUST00000042675 1604 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Pcdha8Q91Y12 Tcf24-202ENSMUST00000185184 4193 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
Pcdha8Q91Y12 Ube3c-201ENSMUST00000049453 5048 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Pcdha8Q91Y12 Cdca7l-201ENSMUST00000021592 2957 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Pcdha8Q91Y12 Xpo4-209ENSMUST00000174545 8680 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Pcdha8Q91Y12 Synpo-201ENSMUST00000097566 5060 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
Pcdha8Q91Y12 Lrrn2-201ENSMUST00000027706 3428 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Pcdha8Q91Y12 Smim3-201ENSMUST00000042710 1984 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Pcdha8Q91Y12 Carmn-201ENSMUST00000181155 1778 ntTSL 2 BASIC16.44■□□□□ 0.22
Pcdha8Q91Y12 Med18-201ENSMUST00000102567 1675 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Pcdha8Q91Y12 Tmem175-204ENSMUST00000146207 1686 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Pcdha8Q91Y12 Nectin3-202ENSMUST00000023335 9116 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Pcdha8Q91Y12 Dgkz-201ENSMUST00000028667 3584 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Pcdha8Q91Y12 4930426L09Rik-201ENSMUST00000028069 1459 ntAPPRIS P1 BASIC16.44■□□□□ 0.22
Pcdha8Q91Y12 Rhof-201ENSMUST00000031401 2208 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Pcdha8Q91Y12 A830073O21Rik-202ENSMUST00000205693 3096 ntBASIC16.44■□□□□ 0.22
Pcdha8Q91Y12 Lypla1-208ENSMUST00000150971 877 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Pcdha8Q91Y12 Vps51-209ENSMUST00000160590 840 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Pcdha8Q91Y12 Gm28374-201ENSMUST00000162374 728 ntAPPRIS P1 TSL 3 BASIC16.44■□□□□ 0.22
Pcdha8Q91Y12 Gm9731-201ENSMUST00000209480 747 ntBASIC16.44■□□□□ 0.22
Pcdha8Q91Y12 Dctn3-201ENSMUST00000030158 973 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Pcdha8Q91Y12 Stambpl1-201ENSMUST00000054956 2024 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Pcdha8Q91Y12 Scamp4-201ENSMUST00000079883 1804 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Pcdha8Q91Y12 Usp47-201ENSMUST00000106653 5540 ntAPPRIS P3 TSL 5 BASIC16.44■□□□□ 0.22
Pcdha8Q91Y12 Tnfsf14-201ENSMUST00000005976 1859 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Pcdha8Q91Y12 Relt-201ENSMUST00000008462 2851 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Pcdha8Q91Y12 Ankra2-203ENSMUST00000123924 2328 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Pcdha8Q91Y12 Fam57b-201ENSMUST00000079423 2328 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Pcdha8Q91Y12 Rasa2-201ENSMUST00000034984 5813 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Pcdha8Q91Y12 Snx16-201ENSMUST00000029047 2288 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
Pcdha8Q91Y12 Afg1l-201ENSMUST00000041024 2513 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Pcdha8Q91Y12 Katnbl1-201ENSMUST00000028552 2886 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Pcdha8Q91Y12 Tm4sf19-201ENSMUST00000115149 1257 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Pcdha8Q91Y12 Gm13181-201ENSMUST00000120117 1069 ntBASIC16.43■□□□□ 0.22
Pcdha8Q91Y12 Gm17098-201ENSMUST00000166507 628 ntTSL 5 BASIC16.43■□□□□ 0.22
Pcdha8Q91Y12 Ramp1-203ENSMUST00000188475 711 ntTSL 3 BASIC16.43■□□□□ 0.22
Pcdha8Q91Y12 Zfp787-204ENSMUST00000207628 576 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Pcdha8Q91Y12 Casp3-203ENSMUST00000210534 583 ntTSL 5 BASIC16.43■□□□□ 0.22
Pcdha8Q91Y12 Lat-201ENSMUST00000032997 1235 ntAPPRIS P2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Pcdha8Q91Y12 Coro7-202ENSMUST00000090480 1147 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Pcdha8Q91Y12 1810013L24Rik-201ENSMUST00000023150 4066 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Pcdha8Q91Y12 Fam71e1-202ENSMUST00000205359 1307 ntAPPRIS ALT2 TSL 2 BASIC16.43■□□□□ 0.22
Pcdha8Q91Y12 Rhot1-201ENSMUST00000017831 3029 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Pcdha8Q91Y12 Ube2j2-213ENSMUST00000166489 3339 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Pcdha8Q91Y12 Sh3glb1-202ENSMUST00000198254 5945 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Pcdha8Q91Y12 Mfsd12-201ENSMUST00000044844 3971 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Pcdha8Q91Y12 Ggt6-202ENSMUST00000100903 1387 ntTSL 5 BASIC16.42■□□□□ 0.22
Pcdha8Q91Y12 Mepce-201ENSMUST00000031740 3128 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Pcdha8Q91Y12 Zfyve19-201ENSMUST00000090174 2008 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Pcdha8Q91Y12 Sphk1-201ENSMUST00000063396 2659 ntAPPRIS ALT2 TSL 2 BASIC16.42■□□□□ 0.22
Pcdha8Q91Y12 Gm16127-201ENSMUST00000131619 234 ntTSL 5 BASIC16.42■□□□□ 0.22
Pcdha8Q91Y12 Mir5122-201ENSMUST00000175004 89 ntBASIC16.42■□□□□ 0.22
Pcdha8Q91Y12 Dleu2-210ENSMUST00000183054 722 ntTSL 5 BASIC16.42■□□□□ 0.22
Retrieved 100 of 76,532 protein–RNA pairs in 69.5 ms