Protein–RNA interactions for Protein: Q8VC56

Rnf8, E3 ubiquitin-protein ligase RNF8, mousemouse

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf8Q8VC56 Plekhh3-206ENSMUST00000164474 3010 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Rnf8Q8VC56 Syngap1-204ENSMUST00000194598 6011 ntAPPRIS P2 TSL 5 BASIC16.3■□□□□ 0.2
Rnf8Q8VC56 Zufsp-202ENSMUST00000218055 2180 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Rnf8Q8VC56 Asph-204ENSMUST00000084915 2884 ntTSL 5 BASIC16.3■□□□□ 0.2
Rnf8Q8VC56 Ankdd1a-201ENSMUST00000061766 1443 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
Rnf8Q8VC56 Fez2-202ENSMUST00000112487 2020 ntAPPRIS ALT1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Rnf8Q8VC56 Dhfr-201ENSMUST00000022218 5347 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Rnf8Q8VC56 Rfx7-202ENSMUST00000163401 7880 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
Rnf8Q8VC56 Nudt4-201ENSMUST00000020217 3210 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Rnf8Q8VC56 Tpm1-204ENSMUST00000113684 887 ntTSL 5 BASIC16.3■□□□□ 0.2
Rnf8Q8VC56 Gm17035-201ENSMUST00000170557 419 ntTSL 3 BASIC16.3■□□□□ 0.2
Rnf8Q8VC56 Gm10698-201ENSMUST00000182663 604 ntBASIC16.3■□□□□ 0.2
Rnf8Q8VC56 Ramp1-203ENSMUST00000188475 711 ntTSL 3 BASIC16.3■□□□□ 0.2
Rnf8Q8VC56 2510002D24Rik-204ENSMUST00000191388 995 ntTSL 5 BASIC16.3■□□□□ 0.2
Rnf8Q8VC56 Rps2-ps3-201ENSMUST00000213102 832 ntBASIC16.3■□□□□ 0.2
Rnf8Q8VC56 Gm18025-201ENSMUST00000221733 862 ntBASIC16.3■□□□□ 0.2
Rnf8Q8VC56 Arhgef33-211ENSMUST00000225658 473 ntBASIC16.3■□□□□ 0.2
Rnf8Q8VC56 Galnt13-204ENSMUST00000112636 7530 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Rnf8Q8VC56 Gm26885-201ENSMUST00000181920 1688 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Rnf8Q8VC56 Gas2-201ENSMUST00000051912 2181 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Rnf8Q8VC56 Nadk2-203ENSMUST00000100790 3665 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
Rnf8Q8VC56 Dgkz-201ENSMUST00000028667 3584 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Rnf8Q8VC56 Arhgap42-201ENSMUST00000093893 6116 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Rnf8Q8VC56 Mmp28-204ENSMUST00000119346 1517 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Rnf8Q8VC56 Polr3d-201ENSMUST00000000793 2016 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Rnf8Q8VC56 Zic3-202ENSMUST00000088629 1951 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Rnf8Q8VC56 Hace1-201ENSMUST00000037044 3785 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Rnf8Q8VC56 Pitpnm1-201ENSMUST00000049658 4206 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Rnf8Q8VC56 Car2-201ENSMUST00000029078 1788 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Rnf8Q8VC56 Atox1-201ENSMUST00000108857 541 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Rnf8Q8VC56 4930554G22Rik-201ENSMUST00000196102 686 ntBASIC16.29■□□□□ 0.2
Rnf8Q8VC56 Gm42545-201ENSMUST00000202755 922 ntBASIC16.29■□□□□ 0.2
Rnf8Q8VC56 Aprt-201ENSMUST00000006764 849 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Rnf8Q8VC56 Crb3-202ENSMUST00000097299 1206 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
Rnf8Q8VC56 E230001N04Rik-202ENSMUST00000181029 2091 ntBASIC16.29■□□□□ 0.2
Rnf8Q8VC56 Gm16401-202ENSMUST00000197463 2074 ntBASIC16.29■□□□□ 0.2
Rnf8Q8VC56 Dnajc19-201ENSMUST00000011029 2499 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Rnf8Q8VC56 Pde3b-201ENSMUST00000032909 6573 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Rnf8Q8VC56 Pard6g-201ENSMUST00000070219 3143 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Rnf8Q8VC56 Wasf1-202ENSMUST00000105509 2719 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
Rnf8Q8VC56 Clk4-201ENSMUST00000093132 1949 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Rnf8Q8VC56 Hnrnpll-205ENSMUST00000184635 3009 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Rnf8Q8VC56 Hmces-201ENSMUST00000032141 1464 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Rnf8Q8VC56 1700041G16Rik-202ENSMUST00000186344 1824 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Rnf8Q8VC56 Cnot9-201ENSMUST00000087215 3268 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Rnf8Q8VC56 St8sia6-201ENSMUST00000003509 7618 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Rnf8Q8VC56 Casd1-201ENSMUST00000015333 3961 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Rnf8Q8VC56 Kcnab3-201ENSMUST00000018614 2538 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Rnf8Q8VC56 Gprc5b-201ENSMUST00000008878 4518 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
Rnf8Q8VC56 Lrch3-203ENSMUST00000135193 2794 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
Rnf8Q8VC56 AC124581.1-201ENSMUST00000225416 1399 ntBASIC16.28■□□□□ 0.2
Rnf8Q8VC56 Nat8l-201ENSMUST00000056355 6529 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Rnf8Q8VC56 Shank3-201ENSMUST00000039074 7131 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Rnf8Q8VC56 Ldb1-205ENSMUST00000137771 2014 ntTSL 5 BASIC16.28■□□□□ 0.2
Rnf8Q8VC56 Gm10532-201ENSMUST00000181913 2301 ntTSL 2 BASIC16.28■□□□□ 0.2
Rnf8Q8VC56 Psmd4-202ENSMUST00000107237 1332 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
Rnf8Q8VC56 Adrb3-202ENSMUST00000117565 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Rnf8Q8VC56 Nnat-205ENSMUST00000153739 1146 ntAPPRIS ALT1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Rnf8Q8VC56 Vps51-209ENSMUST00000160590 840 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Rnf8Q8VC56 Nnat-206ENSMUST00000172487 404 ntTSL 5 BASIC16.28■□□□□ 0.2
Rnf8Q8VC56 Hsbp1-202ENSMUST00000212468 638 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
Rnf8Q8VC56 Nfe2l3-201ENSMUST00000005103 2544 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Rnf8Q8VC56 Sphk1-201ENSMUST00000063396 2659 ntAPPRIS ALT2 TSL 2 BASIC16.28■□□□□ 0.2
Rnf8Q8VC56 Dennd4b-202ENSMUST00000129564 5647 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.2
Rnf8Q8VC56 CT010478.1-201ENSMUST00000220747 2787 ntBASIC16.27■□□□□ 0.2
Rnf8Q8VC56 Ctla2a-201ENSMUST00000021880 1373 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Rnf8Q8VC56 Itgb4-201ENSMUST00000021107 6014 ntAPPRIS P2 TSL 5 BASIC16.27■□□□□ 0.2
Rnf8Q8VC56 Agfg1-205ENSMUST00000187899 2078 ntTSL 5 BASIC16.27■□□□□ 0.2
Rnf8Q8VC56 Grid2-201ENSMUST00000095852 5860 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Rnf8Q8VC56 Aldh1a3-204ENSMUST00000174215 1066 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Rnf8Q8VC56 Gm36736-201ENSMUST00000206060 646 ntTSL 3 BASIC16.27■□□□□ 0.2
Rnf8Q8VC56 Plpp1-202ENSMUST00000070951 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Rnf8Q8VC56 Pank3-201ENSMUST00000018990 7376 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Rnf8Q8VC56 Mpig6b-201ENSMUST00000097337 2252 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Rnf8Q8VC56 Aftph-201ENSMUST00000035350 3998 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.19
Rnf8Q8VC56 Tmem163-203ENSMUST00000160616 2657 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.19
Rnf8Q8VC56 Zdhhc15-201ENSMUST00000042070 5509 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Rnf8Q8VC56 B3galnt2-204ENSMUST00000221300 2397 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Rnf8Q8VC56 Agrn-206ENSMUST00000180572 6891 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.19
Rnf8Q8VC56 Krt81-201ENSMUST00000061185 1857 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Rnf8Q8VC56 Ccdc124-201ENSMUST00000007865 1356 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Rnf8Q8VC56 Nsmf-203ENSMUST00000100334 2957 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Rnf8Q8VC56 Gm10649-203ENSMUST00000148066 1812 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Rnf8Q8VC56 Antxr2-202ENSMUST00000199088 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Rnf8Q8VC56 Hps5-202ENSMUST00000107653 4702 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Rnf8Q8VC56 D16Ertd472e-203ENSMUST00000114220 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Rnf8Q8VC56 Siglecf-202ENSMUST00000121494 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Rnf8Q8VC56 Rhof-201ENSMUST00000031401 2208 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Rnf8Q8VC56 Tlcd1-203ENSMUST00000108338 714 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Rnf8Q8VC56 Mir1199-201ENSMUST00000117015 119 ntBASIC16.26■□□□□ 0.19
Rnf8Q8VC56 Gm13401-201ENSMUST00000117074 291 ntBASIC16.26■□□□□ 0.19
Rnf8Q8VC56 Gssos2-201ENSMUST00000130859 727 ntTSL 3 BASIC16.26■□□□□ 0.19
Rnf8Q8VC56 Smim10l1-204ENSMUST00000191462 574 ntTSL 3 BASIC16.26■□□□□ 0.19
Rnf8Q8VC56 Gm45148-201ENSMUST00000208578 513 ntTSL 5 BASIC16.26■□□□□ 0.19
Rnf8Q8VC56 Prss21-201ENSMUST00000024928 1094 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Rnf8Q8VC56 Thap3-201ENSMUST00000036680 1124 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
Rnf8Q8VC56 Rhot2-201ENSMUST00000043897 3189 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Rnf8Q8VC56 Tm7sf2-202ENSMUST00000113543 1498 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Rnf8Q8VC56 9530080O11Rik-201ENSMUST00000137239 1475 ntTSL 2 BASIC16.26■□□□□ 0.19
Rnf8Q8VC56 Tbx21-201ENSMUST00000001484 2488 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Retrieved 100 of 76,532 protein–RNA pairs in 18.3 ms