Protein–RNA interactions for Protein: Q8JZS7

Hmgcll1, 3-hydroxymethyl-3-methylglutaryl-CoA lyase, cytoplasmic, mousemouse

Predictions only

Length 343 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgcll1Q8JZS7 BC048679-203ENSMUST00000207871 567 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Hmgcll1Q8JZS7 Lpgat1-202ENSMUST00000110856 2792 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Hmgcll1Q8JZS7 Impdh1-210ENSMUST00000162739 2471 ntTSL 5 BASIC17.42■□□□□ 0.38
Hmgcll1Q8JZS7 Iqcd-202ENSMUST00000094391 1673 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Hmgcll1Q8JZS7 Arhgef16-201ENSMUST00000030898 2860 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Hmgcll1Q8JZS7 Usb1-201ENSMUST00000034245 1758 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Hmgcll1Q8JZS7 Idh1-201ENSMUST00000097709 2302 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Hmgcll1Q8JZS7 Smarcc1-207ENSMUST00000199896 5773 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Hmgcll1Q8JZS7 Sap18-202ENSMUST00000111268 662 ntTSL 2 BASIC17.41■□□□□ 0.38
Hmgcll1Q8JZS7 Fgf8-205ENSMUST00000111927 843 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Hmgcll1Q8JZS7 Mrps12-204ENSMUST00000171183 883 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
Hmgcll1Q8JZS7 Snhg4-201ENSMUST00000181664 1190 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Hmgcll1Q8JZS7 Bvht-202ENSMUST00000183087 588 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Hmgcll1Q8JZS7 Snhg10-202ENSMUST00000222812 527 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Hmgcll1Q8JZS7 Odf3b-201ENSMUST00000049968 1040 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Hmgcll1Q8JZS7 Ythdf3-201ENSMUST00000108345 5102 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Hmgcll1Q8JZS7 Gm26858-201ENSMUST00000180608 2040 ntTSL 5 BASIC17.41■□□□□ 0.38
Hmgcll1Q8JZS7 Tox2-205ENSMUST00000165937 1675 ntAPPRIS P2 TSL 5 BASIC17.41■□□□□ 0.38
Hmgcll1Q8JZS7 Mgea5-201ENSMUST00000026243 5024 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Hmgcll1Q8JZS7 Tmtc1-201ENSMUST00000060095 8383 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Hmgcll1Q8JZS7 Rab11b-203ENSMUST00000173860 1544 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Hmgcll1Q8JZS7 Atf4-201ENSMUST00000109605 1724 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Hmgcll1Q8JZS7 Gse1-202ENSMUST00000118136 4492 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Hmgcll1Q8JZS7 Ager-201ENSMUST00000015596 1370 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
Hmgcll1Q8JZS7 Cops6-201ENSMUST00000019638 1787 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Hmgcll1Q8JZS7 Tedc2-201ENSMUST00000024930 2166 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Hmgcll1Q8JZS7 Sh2b2-203ENSMUST00000196397 2797 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Hmgcll1Q8JZS7 Abcg5-202ENSMUST00000163375 1613 ntTSL 5 BASIC17.4■□□□□ 0.38
Hmgcll1Q8JZS7 Bnip2-203ENSMUST00000117450 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Hmgcll1Q8JZS7 Gm20422-202ENSMUST00000149782 956 ntTSL 2 BASIC17.4■□□□□ 0.38
Hmgcll1Q8JZS7 Znhit2-201ENSMUST00000162726 1281 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
Hmgcll1Q8JZS7 8030462N17Rik-201ENSMUST00000074653 3418 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Hmgcll1Q8JZS7 Mrpl49-201ENSMUST00000007482 1722 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Hmgcll1Q8JZS7 Rhobtb3-201ENSMUST00000022078 4980 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Hmgcll1Q8JZS7 Nmnat3-201ENSMUST00000112935 2166 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Hmgcll1Q8JZS7 4930474H06Rik-201ENSMUST00000132822 1590 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Hmgcll1Q8JZS7 Caskin1-201ENSMUST00000024958 6172 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
Hmgcll1Q8JZS7 Pdgfa-202ENSMUST00000076095 2060 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Hmgcll1Q8JZS7 Spats2l-212ENSMUST00000170139 2315 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.38
Hmgcll1Q8JZS7 Snap91-201ENSMUST00000036347 4237 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.38
Hmgcll1Q8JZS7 Mprip-201ENSMUST00000066330 7765 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
Hmgcll1Q8JZS7 Sobp-201ENSMUST00000040275 4980 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Hmgcll1Q8JZS7 Sdc3-201ENSMUST00000070478 4973 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Hmgcll1Q8JZS7 Nrl-201ENSMUST00000062232 2504 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Hmgcll1Q8JZS7 Eral1-201ENSMUST00000021183 2014 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Hmgcll1Q8JZS7 B4galt3-205ENSMUST00000126699 1758 ntTSL 5 BASIC17.39■□□□□ 0.37
Hmgcll1Q8JZS7 Aicda-202ENSMUST00000160685 1292 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Hmgcll1Q8JZS7 Cd70-201ENSMUST00000019633 842 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Hmgcll1Q8JZS7 AC130713.1-201ENSMUST00000228853 1096 ntBASIC17.39■□□□□ 0.37
Hmgcll1Q8JZS7 Rpp25l-201ENSMUST00000038434 856 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Hmgcll1Q8JZS7 BC049762-201ENSMUST00000054226 760 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Hmgcll1Q8JZS7 Hoxb4-201ENSMUST00000049241 2566 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Hmgcll1Q8JZS7 2210016L21Rik-201ENSMUST00000031538 2607 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Hmgcll1Q8JZS7 Coil-201ENSMUST00000036649 2607 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Hmgcll1Q8JZS7 Chd5-205ENSMUST00000164662 9375 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Hmgcll1Q8JZS7 Rara-204ENSMUST00000107475 2469 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Hmgcll1Q8JZS7 Celf3-208ENSMUST00000198316 2505 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Hmgcll1Q8JZS7 Camta1-204ENSMUST00000105670 4961 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Hmgcll1Q8JZS7 Ahr-202ENSMUST00000116436 5548 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Hmgcll1Q8JZS7 Raver2-201ENSMUST00000038463 4045 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Hmgcll1Q8JZS7 2610035D17Rik-201ENSMUST00000127263 1861 ntTSL 5 BASIC17.38■□□□□ 0.37
Hmgcll1Q8JZS7 Gm13524-201ENSMUST00000125869 662 ntTSL 3 BASIC17.38■□□□□ 0.37
Hmgcll1Q8JZS7 Fbxo6-208ENSMUST00000168503 1240 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
Hmgcll1Q8JZS7 Ube2t-201ENSMUST00000027687 1116 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Hmgcll1Q8JZS7 Insl6-201ENSMUST00000052380 708 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Hmgcll1Q8JZS7 Rpl36al-201ENSMUST00000054544 526 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Hmgcll1Q8JZS7 Exosc5-201ENSMUST00000079634 1020 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Hmgcll1Q8JZS7 Slc16a7-205ENSMUST00000210780 2562 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
Hmgcll1Q8JZS7 Tenm3-204ENSMUST00000110346 2267 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Hmgcll1Q8JZS7 Gm26892-201ENSMUST00000181695 1636 ntTSL 5 BASIC17.38■□□□□ 0.37
Hmgcll1Q8JZS7 Cnpy1-202ENSMUST00000118882 1984 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Hmgcll1Q8JZS7 Enah-210ENSMUST00000193074 1971 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
Hmgcll1Q8JZS7 Crocc-202ENSMUST00000097816 6273 ntTSL 5 BASIC17.38■□□□□ 0.37
Hmgcll1Q8JZS7 Vps9d1-203ENSMUST00000122363 2952 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
Hmgcll1Q8JZS7 Cldn7-201ENSMUST00000018713 1335 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Hmgcll1Q8JZS7 Cep68-204ENSMUST00000162811 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Hmgcll1Q8JZS7 Fxr1-201ENSMUST00000001620 2459 ntTSL 5 BASIC17.38■□□□□ 0.37
Hmgcll1Q8JZS7 Nr4a1-201ENSMUST00000023779 2474 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Hmgcll1Q8JZS7 Smarca4-201ENSMUST00000034707 6354 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
Hmgcll1Q8JZS7 Antxr1-201ENSMUST00000042025 5253 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Hmgcll1Q8JZS7 Dnm1-216ENSMUST00000201494 2732 ntTSL 5 BASIC17.37■□□□□ 0.37
Hmgcll1Q8JZS7 Tmtc1-202ENSMUST00000100772 8269 ntTSL 2 BASIC17.37■□□□□ 0.37
Hmgcll1Q8JZS7 Rps6ka3-201ENSMUST00000033671 7244 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Hmgcll1Q8JZS7 4732440D04Rik-203ENSMUST00000191825 5428 ntBASIC17.37■□□□□ 0.37
Hmgcll1Q8JZS7 Ppp1r2-202ENSMUST00000115233 958 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Hmgcll1Q8JZS7 Srpx-202ENSMUST00000115543 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Hmgcll1Q8JZS7 Ramp2-204ENSMUST00000129680 1178 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Hmgcll1Q8JZS7 Rerg-204ENSMUST00000149100 635 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Hmgcll1Q8JZS7 Gm45328-201ENSMUST00000210942 917 ntBASIC17.37■□□□□ 0.37
Hmgcll1Q8JZS7 Tmem270-201ENSMUST00000047305 932 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Hmgcll1Q8JZS7 Sftpb-201ENSMUST00000070437 1131 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
Hmgcll1Q8JZS7 Rbm12b1-202ENSMUST00000069128 3069 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Hmgcll1Q8JZS7 Zfp655-206ENSMUST00000200039 1765 ntAPPRIS ALT1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Hmgcll1Q8JZS7 Gbe1-206ENSMUST00000170464 2736 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
Hmgcll1Q8JZS7 Pdgfa-203ENSMUST00000110896 1363 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
Hmgcll1Q8JZS7 Hsf5-201ENSMUST00000093956 4158 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
Hmgcll1Q8JZS7 Krt12-201ENSMUST00000017741 1852 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Hmgcll1Q8JZS7 4833418N02Rik-202ENSMUST00000146560 1495 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Hmgcll1Q8JZS7 Cldn6-201ENSMUST00000024699 1506 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Hmgcll1Q8JZS7 Wnk2-201ENSMUST00000035538 6630 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 38.8 ms