Protein–RNA interactions for Protein: Q8CG48

Smc2, Structural maintenance of chromosomes protein 2, mousemouse

Known RBP Predictions only

Length 1,191 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc2Q8CG48 Slc6a17-208ENSMUST00000169449 6322 ntAPPRIS ALT1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Smc2Q8CG48 Slc6a17-201ENSMUST00000029499 6308 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
Smc2Q8CG48 Xpo6-213ENSMUST00000168189 4552 ntAPPRIS ALT1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Smc2Q8CG48 Ptprt-201ENSMUST00000109441 6623 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Smc2Q8CG48 Myo9b-206ENSMUST00000212935 6316 ntAPPRIS ALT2 TSL 5 BASIC19.35■□□□□ 0.69
Smc2Q8CG48 Fiz1-208ENSMUST00000208944 2306 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Smc2Q8CG48 Igsf11-201ENSMUST00000023478 3443 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Smc2Q8CG48 Prdm11-201ENSMUST00000111272 3012 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
Smc2Q8CG48 Cxcl14-202ENSMUST00000224801 1467 ntBASIC19.35■□□□□ 0.69
Smc2Q8CG48 Pld2-203ENSMUST00000108557 3655 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Smc2Q8CG48 0610012G03Rik-201ENSMUST00000202722 1445 ntAPPRIS P1 BASIC19.34■□□□□ 0.69
Smc2Q8CG48 March3-202ENSMUST00000102912 1754 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Smc2Q8CG48 Slc2a8-201ENSMUST00000028129 2108 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Smc2Q8CG48 Ppp4r3a-201ENSMUST00000048305 4516 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Smc2Q8CG48 Tmem57-201ENSMUST00000030628 3826 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Smc2Q8CG48 Rnf128-201ENSMUST00000113026 2750 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Smc2Q8CG48 Irf3-213ENSMUST00000209066 1712 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Smc2Q8CG48 Ggt6-202ENSMUST00000100903 1387 ntTSL 5 BASIC19.34■□□□□ 0.69
Smc2Q8CG48 Gm11841-201ENSMUST00000117060 1963 ntBASIC19.34■□□□□ 0.69
Smc2Q8CG48 Zbtb22-201ENSMUST00000053429 2611 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Smc2Q8CG48 Shank1-203ENSMUST00000107938 9826 ntAPPRIS P2 TSL 5 BASIC19.34■□□□□ 0.69
Smc2Q8CG48 Gm7638-201ENSMUST00000121348 967 ntBASIC19.34■□□□□ 0.69
Smc2Q8CG48 Gm2990-201ENSMUST00000180662 1118 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Smc2Q8CG48 Gm45894-202ENSMUST00000212728 1097 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Smc2Q8CG48 Polr3e-203ENSMUST00000207481 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Smc2Q8CG48 Cnksr1-201ENSMUST00000030645 2468 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Smc2Q8CG48 Cnksr2-201ENSMUST00000026750 5738 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Smc2Q8CG48 Gm16201-202ENSMUST00000139218 2330 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Smc2Q8CG48 Csf3-201ENSMUST00000038886 1413 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Smc2Q8CG48 Ctsh-201ENSMUST00000034915 1617 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Smc2Q8CG48 Fam166b-201ENSMUST00000052829 1349 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
Smc2Q8CG48 Epo-203ENSMUST00000111039 706 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
Smc2Q8CG48 Fgf22-203ENSMUST00000219981 1070 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Smc2Q8CG48 AC156016.1-201ENSMUST00000227190 1035 ntBASIC19.33■□□□□ 0.68
Smc2Q8CG48 Cck-201ENSMUST00000035120 691 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Smc2Q8CG48 Gm9803-201ENSMUST00000057649 563 ntAPPRIS P1 BASIC19.33■□□□□ 0.68
Smc2Q8CG48 Dnajc19-201ENSMUST00000011029 2499 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Smc2Q8CG48 St8sia1-201ENSMUST00000032421 8991 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Smc2Q8CG48 Cask-203ENSMUST00000115436 8260 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
Smc2Q8CG48 Relb-201ENSMUST00000049912 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Smc2Q8CG48 Tax1bp3-201ENSMUST00000040687 1523 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Smc2Q8CG48 Zfand5-201ENSMUST00000025659 2834 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Smc2Q8CG48 Krt15-201ENSMUST00000107411 1700 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Smc2Q8CG48 Amacr-201ENSMUST00000070877 2577 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Smc2Q8CG48 Htr5b-201ENSMUST00000055884 1935 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Smc2Q8CG48 Atp5c1-203ENSMUST00000114897 1166 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Smc2Q8CG48 Cox7a2l-202ENSMUST00000167741 1147 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Smc2Q8CG48 Gm17035-201ENSMUST00000170557 419 ntTSL 3 BASIC19.32■□□□□ 0.68
Smc2Q8CG48 Gm22240-201ENSMUST00000175225 82 ntBASIC19.32■□□□□ 0.68
Smc2Q8CG48 Cnih3-204ENSMUST00000209607 564 ntTSL 5 BASIC19.32■□□□□ 0.68
Smc2Q8CG48 Eda-202ENSMUST00000113775 5088 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Smc2Q8CG48 Ppp2r5e-201ENSMUST00000021447 4810 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Smc2Q8CG48 Cdv3-202ENSMUST00000072249 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Smc2Q8CG48 Zmynd19-201ENSMUST00000028350 3903 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Smc2Q8CG48 Lhx6-203ENSMUST00000112963 3481 ntTSL 2 BASIC19.32■□□□□ 0.68
Smc2Q8CG48 Dnajb2-208ENSMUST00000188346 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Smc2Q8CG48 Col17a1-202ENSMUST00000086923 5477 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
Smc2Q8CG48 Rhof-201ENSMUST00000031401 2208 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Smc2Q8CG48 Kcna6-204ENSMUST00000185333 5836 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Smc2Q8CG48 Vps37a-201ENSMUST00000098817 6379 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Smc2Q8CG48 Ppp2r1b-204ENSMUST00000174628 2195 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Smc2Q8CG48 Trim14-202ENSMUST00000102924 1582 ntTSL 2 BASIC19.32■□□□□ 0.68
Smc2Q8CG48 Bcar1-201ENSMUST00000166232 3142 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
Smc2Q8CG48 Nsmf-201ENSMUST00000006646 2922 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
Smc2Q8CG48 Ykt6-201ENSMUST00000002818 2541 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Smc2Q8CG48 Cask-201ENSMUST00000033321 4057 ntTSL 5 BASIC19.31■□□□□ 0.68
Smc2Q8CG48 Fam109a-203ENSMUST00000198271 2335 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Smc2Q8CG48 Krt6a-201ENSMUST00000023788 2256 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Smc2Q8CG48 Ptpdc1-201ENSMUST00000035824 4402 ntAPPRIS P2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Smc2Q8CG48 Gusb-202ENSMUST00000111307 932 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Smc2Q8CG48 Impa1-204ENSMUST00000191670 1100 ntTSL 2 BASIC19.31■□□□□ 0.68
Smc2Q8CG48 Casp3-203ENSMUST00000210534 583 ntTSL 5 BASIC19.31■□□□□ 0.68
Smc2Q8CG48 AC120002.2-201ENSMUST00000220205 773 ntBASIC19.31■□□□□ 0.68
Smc2Q8CG48 Il3ra-202ENSMUST00000223589 738 ntBASIC19.31■□□□□ 0.68
Smc2Q8CG48 Krt88-201ENSMUST00000023781 903 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Smc2Q8CG48 Rbpms2-201ENSMUST00000055844 1987 ntAPPRIS P2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Smc2Q8CG48 Doc2g-201ENSMUST00000025806 1446 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Smc2Q8CG48 Tnfrsf13c-201ENSMUST00000089161 1906 ntAPPRIS P2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Smc2Q8CG48 Ppfibp1-201ENSMUST00000016631 4851 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
Smc2Q8CG48 Gm26774-201ENSMUST00000181534 2401 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Smc2Q8CG48 Atp5c1-202ENSMUST00000114896 1735 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Smc2Q8CG48 Acvr2a-201ENSMUST00000063886 5686 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Smc2Q8CG48 Mtmr12-201ENSMUST00000038172 6840 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Smc2Q8CG48 Parg-208ENSMUST00000170840 2894 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
Smc2Q8CG48 Asph-204ENSMUST00000084915 2884 ntTSL 5 BASIC19.3■□□□□ 0.68
Smc2Q8CG48 Agpat3-202ENSMUST00000105387 1316 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Smc2Q8CG48 Sh3gl2-203ENSMUST00000107188 2286 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Smc2Q8CG48 Etnk2-203ENSMUST00000135222 2297 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Smc2Q8CG48 Rbm12b1-202ENSMUST00000069128 3069 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Smc2Q8CG48 Eml1-203ENSMUST00000109860 4160 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Smc2Q8CG48 Atp6v1c1-201ENSMUST00000022904 2071 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Smc2Q8CG48 Echdc2-204ENSMUST00000116309 1238 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Smc2Q8CG48 AC107711.5-202ENSMUST00000226429 702 ntBASIC19.3■□□□□ 0.68
Smc2Q8CG48 Tm2d1-201ENSMUST00000030292 952 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Smc2Q8CG48 1700020N01Rik-201ENSMUST00000057341 1062 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Smc2Q8CG48 Gm10812-201ENSMUST00000099864 546 ntBASIC19.3■□□□□ 0.68
Smc2Q8CG48 Ccdc166-202ENSMUST00000183130 1563 ntAPPRIS P1 TSL 2 BASIC19.3■□□□□ 0.68
Smc2Q8CG48 H6pd-201ENSMUST00000030830 4745 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
Smc2Q8CG48 Lrig3-201ENSMUST00000074807 4016 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Smc2Q8CG48 Bfsp2-201ENSMUST00000124310 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Retrieved 100 of 76,532 protein–RNA pairs in 52.5 ms