Protein–RNA interactions for Protein: Q8C7M3

Trim9, E3 ubiquitin-protein ligase TRIM9, mousemouse

Predictions only

Length 817 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim9Q8C7M3 Crebzf-201ENSMUST00000061767 3376 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
Trim9Q8C7M3 Pitpnm1-201ENSMUST00000049658 4206 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Trim9Q8C7M3 Map4k4-202ENSMUST00000168431 5632 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
Trim9Q8C7M3 Lsm1-201ENSMUST00000038421 2663 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Trim9Q8C7M3 Nrxn2-202ENSMUST00000113458 3503 ntTSL 5 BASIC18.66■□□□□ 0.58
Trim9Q8C7M3 Cyp4f41-ps-201ENSMUST00000126790 1077 ntBASIC18.66■□□□□ 0.58
Trim9Q8C7M3 Gm20472-201ENSMUST00000174403 1240 ntBASIC18.66■□□□□ 0.58
Trim9Q8C7M3 Cldn14-205ENSMUST00000177648 1266 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
Trim9Q8C7M3 Fau-203ENSMUST00000179142 736 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Trim9Q8C7M3 Gm26938-201ENSMUST00000182839 744 ntAPPRIS P1 TSL 3 BASIC18.66■□□□□ 0.58
Trim9Q8C7M3 Spata33-206ENSMUST00000212637 569 ntAPPRIS ALT2 TSL 2 BASIC18.66■□□□□ 0.58
Trim9Q8C7M3 Olfr464-201ENSMUST00000074874 1084 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
Trim9Q8C7M3 AC122335.2-201ENSMUST00000213901 6181 ntBASIC18.66■□□□□ 0.58
Trim9Q8C7M3 Dusp8-201ENSMUST00000039926 4804 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Trim9Q8C7M3 Zfp746-201ENSMUST00000073124 3651 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
Trim9Q8C7M3 Pex11a-201ENSMUST00000032761 2241 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Trim9Q8C7M3 Dok4-201ENSMUST00000046461 2590 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Trim9Q8C7M3 Rock2-201ENSMUST00000020904 7644 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
Trim9Q8C7M3 Haglr-201ENSMUST00000100000 2085 ntBASIC18.65■□□□□ 0.58
Trim9Q8C7M3 Akap8l-201ENSMUST00000050214 2075 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Trim9Q8C7M3 Rassf8-203ENSMUST00000111704 5446 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
Trim9Q8C7M3 Wnt10b-204ENSMUST00000226655 1807 ntBASIC18.65■□□□□ 0.58
Trim9Q8C7M3 Adamtsl1-201ENSMUST00000048885 1842 ntTSL 5 BASIC18.65■□□□□ 0.58
Trim9Q8C7M3 Uhrf2-201ENSMUST00000025739 3536 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Trim9Q8C7M3 Rnf157-202ENSMUST00000106398 4553 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
Trim9Q8C7M3 Trim31-201ENSMUST00000078438 2257 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Trim9Q8C7M3 Gm26596-201ENSMUST00000180464 2655 ntBASIC18.65■□□□□ 0.58
Trim9Q8C7M3 Lrch3-203ENSMUST00000135193 2794 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
Trim9Q8C7M3 Gse1-202ENSMUST00000118136 4492 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Trim9Q8C7M3 Gm8909-201ENSMUST00000040467 1357 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Trim9Q8C7M3 Gm26697-201ENSMUST00000180898 1760 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Trim9Q8C7M3 Zfp326-201ENSMUST00000031227 2667 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Trim9Q8C7M3 Ptges3l-202ENSMUST00000103102 1463 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Trim9Q8C7M3 Fmr1-201ENSMUST00000088546 4409 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Trim9Q8C7M3 Faap20-201ENSMUST00000097747 1479 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Trim9Q8C7M3 Hand1-201ENSMUST00000036917 1904 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
Trim9Q8C7M3 Slc16a3-202ENSMUST00000100130 2386 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
Trim9Q8C7M3 Rnf157-201ENSMUST00000100202 4619 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.58
Trim9Q8C7M3 Gas6-201ENSMUST00000033828 2548 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Trim9Q8C7M3 Pacsin1-203ENSMUST00000114872 1647 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Trim9Q8C7M3 Dnajc2-201ENSMUST00000030771 2133 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Trim9Q8C7M3 Nucb2-201ENSMUST00000032895 1685 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Trim9Q8C7M3 Crk-203ENSMUST00000108425 4290 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Trim9Q8C7M3 Tbc1d9-202ENSMUST00000093393 5334 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Trim9Q8C7M3 Bad-202ENSMUST00000113423 990 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Trim9Q8C7M3 Gm14453-201ENSMUST00000139677 553 ntTSL 3 BASIC18.64■□□□□ 0.57
Trim9Q8C7M3 Gm19610-201ENSMUST00000202894 408 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Trim9Q8C7M3 Msi2-201ENSMUST00000092794 1855 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Trim9Q8C7M3 Fndc11-201ENSMUST00000050026 1387 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Trim9Q8C7M3 Ewsr1-203ENSMUST00000079949 2588 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
Trim9Q8C7M3 Tbcel-201ENSMUST00000066148 5000 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Trim9Q8C7M3 Fam131b-203ENSMUST00000143278 4104 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
Trim9Q8C7M3 AU022751-202ENSMUST00000117544 2201 ntAPPRIS P4 BASIC18.64■□□□□ 0.57
Trim9Q8C7M3 Relt-201ENSMUST00000008462 2851 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Trim9Q8C7M3 Lrrtm1-202ENSMUST00000159616 2541 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Trim9Q8C7M3 Camk2d-228ENSMUST00000200171 5396 ntTSL 5 BASIC18.63■□□□□ 0.57
Trim9Q8C7M3 Hmgn2-204ENSMUST00000105893 973 ntTSL 3 BASIC18.63■□□□□ 0.57
Trim9Q8C7M3 Rpl18-ps2-201ENSMUST00000118863 567 ntBASIC18.63■□□□□ 0.57
Trim9Q8C7M3 Gm11539-201ENSMUST00000119837 557 ntBASIC18.63■□□□□ 0.57
Trim9Q8C7M3 Gm13436-201ENSMUST00000120418 567 ntBASIC18.63■□□□□ 0.57
Trim9Q8C7M3 Spdya-202ENSMUST00000124001 1247 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Trim9Q8C7M3 Btg1-202ENSMUST00000218953 668 ntTSL 2 BASIC18.63■□□□□ 0.57
Trim9Q8C7M3 Gm43548-201ENSMUST00000197139 2353 ntBASIC18.63■□□□□ 0.57
Trim9Q8C7M3 Casp3-204ENSMUST00000211115 2601 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Trim9Q8C7M3 Csk-201ENSMUST00000034863 2749 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Trim9Q8C7M3 Itsn1-201ENSMUST00000056482 5364 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Trim9Q8C7M3 Fbxl3-201ENSMUST00000022720 4309 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Trim9Q8C7M3 Pcmt1-202ENSMUST00000159917 2491 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
Trim9Q8C7M3 Zic1-202ENSMUST00000065360 2811 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Trim9Q8C7M3 Naf1-201ENSMUST00000118009 2990 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Trim9Q8C7M3 C230012O17Rik-201ENSMUST00000130085 2999 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Trim9Q8C7M3 Pacs2-202ENSMUST00000220541 3101 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Trim9Q8C7M3 Cnot9-201ENSMUST00000087215 3268 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Trim9Q8C7M3 Bean1-204ENSMUST00000171018 3386 ntAPPRIS P4 TSL 1 (best) BASIC18.62■□□□□ 0.57
Trim9Q8C7M3 2210408F21Rik-204ENSMUST00000136571 478 ntTSL 3 BASIC18.62■□□□□ 0.57
Trim9Q8C7M3 Gm42884-202ENSMUST00000202523 423 ntTSL 3 BASIC18.62■□□□□ 0.57
Trim9Q8C7M3 Gm7370-201ENSMUST00000219471 767 ntBASIC18.62■□□□□ 0.57
Trim9Q8C7M3 Mpst-203ENSMUST00000169133 1309 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
Trim9Q8C7M3 Cldn7-201ENSMUST00000018713 1335 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Trim9Q8C7M3 Gm12359-201ENSMUST00000139017 1399 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Trim9Q8C7M3 Ttyh1-217ENSMUST00000206869 1491 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Trim9Q8C7M3 Rnls-201ENSMUST00000096114 1597 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Trim9Q8C7M3 Hsf4-202ENSMUST00000163734 1630 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Trim9Q8C7M3 Ptgis-202ENSMUST00000088041 1711 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Trim9Q8C7M3 Trim71-201ENSMUST00000111816 9332 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Trim9Q8C7M3 Osbpl1a-205ENSMUST00000119512 1947 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Trim9Q8C7M3 Evc-202ENSMUST00000114148 2119 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Trim9Q8C7M3 Rilpl1-201ENSMUST00000062153 2249 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Trim9Q8C7M3 Iqsec2-207ENSMUST00000168786 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Trim9Q8C7M3 Nisch-208ENSMUST00000165981 2415 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Trim9Q8C7M3 Cct8-201ENSMUST00000026704 2394 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Trim9Q8C7M3 Abi1-215ENSMUST00000178908 2239 ntAPPRIS ALT1 TSL 5 BASIC18.61■□□□□ 0.57
Trim9Q8C7M3 Pole4-201ENSMUST00000095786 1769 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Trim9Q8C7M3 Ocel1-203ENSMUST00000110052 5285 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Trim9Q8C7M3 Btnl9-201ENSMUST00000046522 5273 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Trim9Q8C7M3 Erich2-201ENSMUST00000100041 1749 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Trim9Q8C7M3 Rassf7-201ENSMUST00000046890 1525 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Trim9Q8C7M3 Abhd11-206ENSMUST00000154469 1473 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Trim9Q8C7M3 Cenps-207ENSMUST00000177408 689 ntTSL 2 BASIC18.61■□□□□ 0.57
Trim9Q8C7M3 Gm45618-201ENSMUST00000209890 660 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
Retrieved 100 of 76,532 protein–RNA pairs in 32.3 ms