Protein–RNA interactions for Protein: Q8C393

Zim1, Zinc finger, imprinted 1, mousemouse

Predictions only

Length 579 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Zim1Q8C393 Gne-202ENSMUST00000102936 2920 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Zim1Q8C393 Cep57-208ENSMUST00000147115 2262 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Zim1Q8C393 2700046G09Rik-201ENSMUST00000181612 1641 ntTSL 2 BASIC14.36□□□□□ -0.11
Zim1Q8C393 Trim41-201ENSMUST00000047145 3432 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Zim1Q8C393 Cbx1-201ENSMUST00000018810 1824 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Zim1Q8C393 C430049E01Rik-201ENSMUST00000207913 1820 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Zim1Q8C393 Hpca-202ENSMUST00000095807 1666 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Zim1Q8C393 Ankle2-206ENSMUST00000197188 4077 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
Zim1Q8C393 Sncb-201ENSMUST00000036825 1351 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Zim1Q8C393 Kif1c-201ENSMUST00000072187 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Zim1Q8C393 Bmp8a-202ENSMUST00000102641 1917 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
Zim1Q8C393 Lrig3-201ENSMUST00000074807 4016 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Zim1Q8C393 Tmem145-202ENSMUST00000119703 1781 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
Zim1Q8C393 Fiz1-201ENSMUST00000077385 2546 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Zim1Q8C393 Spata3-208ENSMUST00000149469 1110 ntTSL 5 BASIC14.35□□□□□ -0.11
Zim1Q8C393 4931413I07Rik-201ENSMUST00000173637 764 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Zim1Q8C393 2810405F15Rik-201ENSMUST00000195368 932 ntBASIC14.35□□□□□ -0.11
Zim1Q8C393 Ube2s-201ENSMUST00000079496 1238 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Zim1Q8C393 Cpeb3-212ENSMUST00000154376 5671 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
Zim1Q8C393 Tbx3-202ENSMUST00000079719 4982 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Zim1Q8C393 Irf2bpl-201ENSMUST00000038422 4098 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
Zim1Q8C393 Lancl2-202ENSMUST00000072954 2245 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Zim1Q8C393 Clvs2-203ENSMUST00000160299 2610 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Zim1Q8C393 Btbd1-201ENSMUST00000026093 3001 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Zim1Q8C393 Mbtps2-201ENSMUST00000058098 4797 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Zim1Q8C393 Gbp5-201ENSMUST00000090127 3055 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Zim1Q8C393 Trnt1-202ENSMUST00000113247 1934 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Zim1Q8C393 Cand2-201ENSMUST00000075995 5474 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Zim1Q8C393 AL591207.1-203ENSMUST00000222401 1380 ntTSL 5 BASIC14.34□□□□□ -0.11
Zim1Q8C393 Aup1-201ENSMUST00000092618 1769 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Zim1Q8C393 Sept8-201ENSMUST00000108987 4436 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Zim1Q8C393 Zmynd11-207ENSMUST00000110638 4003 ntTSL 5 BASIC14.34□□□□□ -0.11
Zim1Q8C393 Scube3-201ENSMUST00000043503 6699 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Zim1Q8C393 Thsd7a-202ENSMUST00000119581 5678 ntAPPRIS P2 TSL 5 BASIC14.34□□□□□ -0.11
Zim1Q8C393 H6pd-201ENSMUST00000030830 4745 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
Zim1Q8C393 Esx1-202ENSMUST00000113066 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Zim1Q8C393 Mrpl9-202ENSMUST00000196143 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Zim1Q8C393 Brpf1-203ENSMUST00000113121 4603 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
Zim1Q8C393 Rps14-202ENSMUST00000118551 602 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
Zim1Q8C393 Moap1-202ENSMUST00000178384 1284 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
Zim1Q8C393 Wnt10b-205ENSMUST00000226846 1204 ntBASIC14.34□□□□□ -0.11
Zim1Q8C393 Mfap2-201ENSMUST00000071977 1073 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Zim1Q8C393 Rpl38-202ENSMUST00000082092 345 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
Zim1Q8C393 Chd4-201ENSMUST00000056889 6697 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Zim1Q8C393 H2afy2-201ENSMUST00000020283 2175 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Zim1Q8C393 4930471E19Rik-201ENSMUST00000219022 1514 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Zim1Q8C393 Hdac2-202ENSMUST00000105510 3250 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Zim1Q8C393 Kmt5b-206ENSMUST00000113973 6130 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
Zim1Q8C393 Cacng6-202ENSMUST00000183200 1977 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Zim1Q8C393 Zscan29-203ENSMUST00000146243 2894 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Zim1Q8C393 E230025N22Rik-201ENSMUST00000115682 2016 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Zim1Q8C393 Asic2-201ENSMUST00000021045 3436 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Zim1Q8C393 Lsp1-204ENSMUST00000105967 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Zim1Q8C393 Aim2-204ENSMUST00000166137 2079 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Zim1Q8C393 Pde1c-203ENSMUST00000164037 3068 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
Zim1Q8C393 Shisa2-201ENSMUST00000053949 3119 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Zim1Q8C393 Gm10564-201ENSMUST00000097750 3113 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
Zim1Q8C393 Pcdha2-201ENSMUST00000115662 5361 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Zim1Q8C393 Rundc3b-201ENSMUST00000047485 3677 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
Zim1Q8C393 Rilp-201ENSMUST00000042972 1489 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Zim1Q8C393 Syn1-201ENSMUST00000081893 3209 ntAPPRIS P4 TSL 5 BASIC14.33□□□□□ -0.12
Zim1Q8C393 Zfp629-207ENSMUST00000134446 670 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Zim1Q8C393 Zfp560-202ENSMUST00000143992 608 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Zim1Q8C393 Gm22240-201ENSMUST00000175225 82 ntBASIC14.33□□□□□ -0.12
Zim1Q8C393 Scamp4-202ENSMUST00000180350 1271 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Zim1Q8C393 Mrpl10-202ENSMUST00000054252 744 ntTSL 5 BASIC14.33□□□□□ -0.12
Zim1Q8C393 Gm10638-201ENSMUST00000098532 905 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
Zim1Q8C393 Syt6-202ENSMUST00000117221 4394 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Zim1Q8C393 Igdcc3-201ENSMUST00000034961 3146 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Zim1Q8C393 Gm28372-201ENSMUST00000188900 1876 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
Zim1Q8C393 Fstl3-201ENSMUST00000020575 1955 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Zim1Q8C393 Zic3-202ENSMUST00000088629 1951 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Zim1Q8C393 Tfdp2-209ENSMUST00000188750 1713 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
Zim1Q8C393 Aste1-202ENSMUST00000123807 2349 ntAPPRIS ALT2 TSL 2 BASIC14.32□□□□□ -0.12
Zim1Q8C393 Zbtb32-202ENSMUST00000108151 1775 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
Zim1Q8C393 Zfp277-202ENSMUST00000069692 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Zim1Q8C393 Zfp382-201ENSMUST00000098596 2117 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Zim1Q8C393 Rfx5-207ENSMUST00000137088 4333 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
Zim1Q8C393 Cep85l-205ENSMUST00000220443 7425 ntAPPRIS P2 TSL 5 BASIC14.32□□□□□ -0.12
Zim1Q8C393 Wwc2-201ENSMUST00000057561 8678 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Zim1Q8C393 Atxn7l3-202ENSMUST00000107132 3706 ntAPPRIS P4 TSL 5 BASIC14.32□□□□□ -0.12
Zim1Q8C393 Zc3h14-203ENSMUST00000110104 3146 ntTSL 5 BASIC14.32□□□□□ -0.12
Zim1Q8C393 Mepce-201ENSMUST00000031740 3128 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Zim1Q8C393 Espn-208ENSMUST00000105654 1566 ntTSL 5 BASIC14.32□□□□□ -0.12
Zim1Q8C393 Ssu72-202ENSMUST00000105595 874 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Zim1Q8C393 Gm11249-201ENSMUST00000117071 859 ntBASIC14.32□□□□□ -0.12
Zim1Q8C393 Gm42882-201ENSMUST00000201788 506 ntTSL 3 BASIC14.32□□□□□ -0.12
Zim1Q8C393 Clybl-201ENSMUST00000026625 1231 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Zim1Q8C393 Nipsnap1-201ENSMUST00000038570 1926 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Zim1Q8C393 Tpd52l1-201ENSMUST00000000305 1308 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Zim1Q8C393 Ptch1-201ENSMUST00000021921 7725 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Zim1Q8C393 Wnt1-201ENSMUST00000023734 2378 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Zim1Q8C393 Cadm1-204ENSMUST00000114548 4482 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Zim1Q8C393 Agps-201ENSMUST00000047232 7359 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Zim1Q8C393 Zfp786-201ENSMUST00000058844 3191 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Zim1Q8C393 Bloc1s3-201ENSMUST00000077408 3188 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Zim1Q8C393 Prmt1-203ENSMUST00000207370 2147 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Zim1Q8C393 4930448E22Rik-202ENSMUST00000215242 2102 ntTSL 5 BASIC14.32□□□□□ -0.12
Zim1Q8C393 H2-Q4-201ENSMUST00000081435 1793 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Zim1Q8C393 Dlgap1-209ENSMUST00000140728 2173 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 22 ms