Protein–RNA interactions for Protein: Q8BM39

Prpf18, Pre-mRNA-splicing factor 18, mousemouse

Predictions only

Length 342 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf18Q8BM39 Nrip1-201ENSMUST00000054178 4529 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Prpf18Q8BM39 Ankrd44-201ENSMUST00000044359 6192 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
Prpf18Q8BM39 Rprd1b-207ENSMUST00000152452 1910 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Prpf18Q8BM39 Wisp2-201ENSMUST00000029188 1719 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Prpf18Q8BM39 Capn15-205ENSMUST00000212520 5216 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Prpf18Q8BM39 Ube2i-207ENSMUST00000172868 2755 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Prpf18Q8BM39 Agxt-201ENSMUST00000027491 1553 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Prpf18Q8BM39 Cmip-202ENSMUST00000166750 2408 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
Prpf18Q8BM39 Agbl5-208ENSMUST00000201168 3199 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
Prpf18Q8BM39 Timp4-202ENSMUST00000205131 945 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Prpf18Q8BM39 Gm44549-201ENSMUST00000208351 577 ntBASIC16.12■□□□□ 0.17
Prpf18Q8BM39 Rbks-201ENSMUST00000031018 1042 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Prpf18Q8BM39 Gm10602-201ENSMUST00000098239 609 ntBASIC16.12■□□□□ 0.17
Prpf18Q8BM39 Tmem229b-206ENSMUST00000174697 3697 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
Prpf18Q8BM39 Rtcb-201ENSMUST00000001834 2009 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Prpf18Q8BM39 Eda-205ENSMUST00000113778 4942 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Prpf18Q8BM39 Eda-207ENSMUST00000113780 4915 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Prpf18Q8BM39 Eda-208ENSMUST00000113781 4915 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Prpf18Q8BM39 Eda-209ENSMUST00000113783 4930 ntTSL 5 BASIC16.12■□□□□ 0.17
Prpf18Q8BM39 Chka-202ENSMUST00000072055 2549 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
Prpf18Q8BM39 Htatip2-202ENSMUST00000207895 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Prpf18Q8BM39 Adam22-201ENSMUST00000046838 2773 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
Prpf18Q8BM39 1700041G16Rik-202ENSMUST00000186344 1824 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Prpf18Q8BM39 Agfg1-205ENSMUST00000187899 2078 ntTSL 5 BASIC16.12■□□□□ 0.17
Prpf18Q8BM39 Tead3-201ENSMUST00000114799 2448 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Prpf18Q8BM39 Fem1b-201ENSMUST00000034775 6785 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Prpf18Q8BM39 Ret-202ENSMUST00000088790 4497 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Prpf18Q8BM39 Fbxo9-202ENSMUST00000085311 2155 ntAPPRIS ALT1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Prpf18Q8BM39 Bcor-204ENSMUST00000115513 6941 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Prpf18Q8BM39 Prdm11-201ENSMUST00000111272 3012 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
Prpf18Q8BM39 Btbd1-201ENSMUST00000026093 3001 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Prpf18Q8BM39 Mipep-201ENSMUST00000063562 3015 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Prpf18Q8BM39 Arhgef2-202ENSMUST00000107510 4390 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Prpf18Q8BM39 Gm16867-201ENSMUST00000179116 3084 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Prpf18Q8BM39 Col11a2-201ENSMUST00000087497 6048 ntAPPRIS P2 TSL 2 BASIC16.11■□□□□ 0.17
Prpf18Q8BM39 Flg-201ENSMUST00000050758 1488 ntBASIC16.11■□□□□ 0.17
Prpf18Q8BM39 Eva1a-201ENSMUST00000042974 1773 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Prpf18Q8BM39 Rcc2-202ENSMUST00000071169 3999 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Prpf18Q8BM39 A530016L24Rik-202ENSMUST00000223266 1547 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Prpf18Q8BM39 Chd4-202ENSMUST00000112390 6537 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
Prpf18Q8BM39 Tead1-201ENSMUST00000059768 9964 ntAPPRIS P4 TSL 1 (best) BASIC16.11■□□□□ 0.17
Prpf18Q8BM39 Kif26a-201ENSMUST00000128402 6918 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Prpf18Q8BM39 Ube2b-202ENSMUST00000109086 585 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
Prpf18Q8BM39 Ikzf5-203ENSMUST00000128432 714 ntTSL 3 BASIC16.11■□□□□ 0.17
Prpf18Q8BM39 Coro1a-209ENSMUST00000173108 1170 ntTSL 5 BASIC16.11■□□□□ 0.17
Prpf18Q8BM39 Mrpl52-204ENSMUST00000199195 463 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Prpf18Q8BM39 Gm10153-202ENSMUST00000210290 963 ntAPPRIS P1 BASIC16.11■□□□□ 0.17
Prpf18Q8BM39 Gm45822-201ENSMUST00000212231 259 ntTSL 3 BASIC16.11■□□□□ 0.17
Prpf18Q8BM39 Nudcd2-201ENSMUST00000020578 1577 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Prpf18Q8BM39 Gm43598-201ENSMUST00000202482 2479 ntBASIC16.11■□□□□ 0.17
Prpf18Q8BM39 Rnf128-201ENSMUST00000113026 2750 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Prpf18Q8BM39 Ppt2-204ENSMUST00000168391 1342 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
Prpf18Q8BM39 Plppr5-201ENSMUST00000039564 4670 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Prpf18Q8BM39 Fbxl21-203ENSMUST00000121871 1963 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Prpf18Q8BM39 Ttll5-201ENSMUST00000040179 5081 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
Prpf18Q8BM39 Rfx5-201ENSMUST00000029772 4189 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Prpf18Q8BM39 Mef2d-203ENSMUST00000107559 1791 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Prpf18Q8BM39 Klk9-201ENSMUST00000005891 1476 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Prpf18Q8BM39 Fam72a-201ENSMUST00000068613 2191 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Prpf18Q8BM39 Ppm1h-206ENSMUST00000161487 2931 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Prpf18Q8BM39 Hbs1l-203ENSMUST00000092674 2625 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Prpf18Q8BM39 Snx18-201ENSMUST00000109241 4447 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Prpf18Q8BM39 Aste1-202ENSMUST00000123807 2349 ntAPPRIS ALT2 TSL 2 BASIC16.1■□□□□ 0.17
Prpf18Q8BM39 Mrpl52-201ENSMUST00000010550 418 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Prpf18Q8BM39 Gm13148-201ENSMUST00000118892 745 ntBASIC16.1■□□□□ 0.17
Prpf18Q8BM39 Smim27-201ENSMUST00000129758 1044 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Prpf18Q8BM39 Gm38285-201ENSMUST00000192928 922 ntBASIC16.1■□□□□ 0.17
Prpf18Q8BM39 Nat8-201ENSMUST00000032073 1123 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Prpf18Q8BM39 Cldn3-201ENSMUST00000094245 1259 ntAPPRIS P1 BASIC16.1■□□□□ 0.17
Prpf18Q8BM39 Selenom-201ENSMUST00000094469 707 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Prpf18Q8BM39 B230219D22Rik-201ENSMUST00000057844 4652 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Prpf18Q8BM39 Ccnd3-215ENSMUST00000183044 2064 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Prpf18Q8BM39 AC069562.2-201ENSMUST00000224644 2146 ntBASIC16.1■□□□□ 0.17
Prpf18Q8BM39 Atxn7l3-201ENSMUST00000073234 3688 ntAPPRIS ALT1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Prpf18Q8BM39 9130019P16Rik-202ENSMUST00000145111 4486 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Prpf18Q8BM39 Plekha4-202ENSMUST00000209517 2577 ntAPPRIS P2 TSL 5 BASIC16.1■□□□□ 0.17
Prpf18Q8BM39 Mpst-201ENSMUST00000043865 1413 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Prpf18Q8BM39 Henmt1-202ENSMUST00000098680 1466 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Prpf18Q8BM39 Mycs-201ENSMUST00000058404 2368 ntAPPRIS P1 BASIC16.09■□□□□ 0.17
Prpf18Q8BM39 Gm21974-201ENSMUST00000126662 2037 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
Prpf18Q8BM39 Slc30a2-201ENSMUST00000081094 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Prpf18Q8BM39 BC030336-201ENSMUST00000060175 4831 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Prpf18Q8BM39 Gm8839-201ENSMUST00000121279 1645 ntBASIC16.09■□□□□ 0.17
Prpf18Q8BM39 Krt9-201ENSMUST00000059707 2580 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Prpf18Q8BM39 Kcnn1-201ENSMUST00000110078 4047 ntAPPRIS P2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Prpf18Q8BM39 Kcnn1-202ENSMUST00000110081 4045 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
Prpf18Q8BM39 Zmym3-201ENSMUST00000063577 6057 ntAPPRIS P2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Prpf18Q8BM39 Smim1-209ENSMUST00000145527 562 ntAPPRIS P1 TSL 2 BASIC16.09■□□□□ 0.17
Prpf18Q8BM39 Rab3c-203ENSMUST00000224180 967 ntBASIC16.09■□□□□ 0.17
Prpf18Q8BM39 Smn1-202ENSMUST00000091321 223 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Prpf18Q8BM39 Nyx-201ENSMUST00000050434 5183 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Prpf18Q8BM39 Anapc16-201ENSMUST00000020307 1379 ntTSL 2 BASIC16.09■□□□□ 0.17
Prpf18Q8BM39 Gpn2-201ENSMUST00000030661 1367 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Prpf18Q8BM39 Neu1-201ENSMUST00000007253 2474 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Prpf18Q8BM39 Ern1-204ENSMUST00000106801 1957 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Prpf18Q8BM39 Plekha8-202ENSMUST00000119706 6739 ntAPPRIS P1 TSL 2 BASIC16.09■□□□□ 0.17
Prpf18Q8BM39 Tsc22d1-214ENSMUST00000177207 1476 ntTSL 3 BASIC16.09■□□□□ 0.17
Prpf18Q8BM39 Zbtb45-201ENSMUST00000051390 2171 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Prpf18Q8BM39 Gm4425-201ENSMUST00000172838 2857 ntTSL 2 BASIC16.09■□□□□ 0.17
Prpf18Q8BM39 Agap1-204ENSMUST00000190096 4078 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.17
Retrieved 100 of 76,532 protein–RNA pairs in 31.3 ms