Protein–RNA interactions for Protein: Q8BL00

Cdhr3, Cadherin-related family member 3, mousemouse

Predictions only

Length 831 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdhr3Q8BL00 Gata6-201ENSMUST00000047762 3194 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Cdhr3Q8BL00 Gm10065-201ENSMUST00000076238 345 ntAPPRIS P1 BASIC14.79□□□□□ -0.04
Cdhr3Q8BL00 Rap1gap-202ENSMUST00000097837 3168 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Cdhr3Q8BL00 Ints8-201ENSMUST00000044616 3433 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Cdhr3Q8BL00 Fam219b-202ENSMUST00000114200 3017 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Cdhr3Q8BL00 Chsy3-201ENSMUST00000080721 2931 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Cdhr3Q8BL00 Shh-201ENSMUST00000002708 2847 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Cdhr3Q8BL00 Trim8-201ENSMUST00000026008 3230 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Cdhr3Q8BL00 Doc2g-201ENSMUST00000025806 1446 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Cdhr3Q8BL00 Fam71e1-202ENSMUST00000205359 1307 ntAPPRIS ALT2 TSL 2 BASIC14.78□□□□□ -0.04
Cdhr3Q8BL00 Prcd-201ENSMUST00000106381 724 ntTSL 3 BASIC14.78□□□□□ -0.04
Cdhr3Q8BL00 Gm37292-201ENSMUST00000192062 758 ntBASIC14.78□□□□□ -0.04
Cdhr3Q8BL00 Gabarapl1-202ENSMUST00000204487 902 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Cdhr3Q8BL00 Gm44210-201ENSMUST00000205253 713 ntTSL 3 BASIC14.78□□□□□ -0.04
Cdhr3Q8BL00 Cox8a-201ENSMUST00000039758 545 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Cdhr3Q8BL00 Vps37d-202ENSMUST00000076203 1286 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Cdhr3Q8BL00 Ankra2-204ENSMUST00000150352 2217 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Cdhr3Q8BL00 Bhlhb9-201ENSMUST00000068755 2823 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Cdhr3Q8BL00 Rab11fip4-201ENSMUST00000017783 7156 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Cdhr3Q8BL00 Sec14l1-203ENSMUST00000103026 2589 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
Cdhr3Q8BL00 Lrp12-202ENSMUST00000110305 4244 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
Cdhr3Q8BL00 Dtx2-203ENSMUST00000111144 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
Cdhr3Q8BL00 Gm42918-201ENSMUST00000199249 1580 ntBASIC14.77□□□□□ -0.04
Cdhr3Q8BL00 Fhl2-201ENSMUST00000008280 1563 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Cdhr3Q8BL00 Fmnl3-202ENSMUST00000088233 4423 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.04
Cdhr3Q8BL00 Fam181a-201ENSMUST00000179363 1406 ntAPPRIS P1 TSL 2 BASIC14.77□□□□□ -0.04
Cdhr3Q8BL00 Was-201ENSMUST00000033505 2114 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Cdhr3Q8BL00 Atp6v1b2-201ENSMUST00000006435 2825 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Cdhr3Q8BL00 Mid1ip1-202ENSMUST00000115524 2022 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Cdhr3Q8BL00 Praf2-201ENSMUST00000033489 1339 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Cdhr3Q8BL00 Arid3b-202ENSMUST00000098686 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
Cdhr3Q8BL00 Nipsnap1-201ENSMUST00000038570 1926 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Cdhr3Q8BL00 Atp8a1-204ENSMUST00000113652 854 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Cdhr3Q8BL00 Tpm1-204ENSMUST00000113684 887 ntTSL 5 BASIC14.77□□□□□ -0.05
Cdhr3Q8BL00 Alcam-206ENSMUST00000168071 878 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Cdhr3Q8BL00 2610035F20Rik-202ENSMUST00000177306 1149 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Cdhr3Q8BL00 Gm27275-201ENSMUST00000184318 272 ntBASIC14.77□□□□□ -0.05
Cdhr3Q8BL00 Thap3-201ENSMUST00000036680 1124 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.05
Cdhr3Q8BL00 Ypel1-202ENSMUST00000090199 631 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Cdhr3Q8BL00 Tbc1d9-201ENSMUST00000034145 4631 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Cdhr3Q8BL00 Coro1a-201ENSMUST00000032949 1660 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Cdhr3Q8BL00 Inpp5e-202ENSMUST00000114090 2790 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.05
Cdhr3Q8BL00 P2rx4-201ENSMUST00000031429 2702 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Cdhr3Q8BL00 Ccnd3-202ENSMUST00000171031 2113 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.05
Cdhr3Q8BL00 Wnt10b-207ENSMUST00000228594 1510 ntAPPRIS P1 BASIC14.76□□□□□ -0.05
Cdhr3Q8BL00 Map6-207ENSMUST00000208924 2906 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Cdhr3Q8BL00 Ppp2r2d-207ENSMUST00000155672 1938 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Cdhr3Q8BL00 Irak1-205ENSMUST00000114353 1896 ntAPPRIS ALT2 TSL 5 BASIC14.76□□□□□ -0.05
Cdhr3Q8BL00 A930001A20Rik-201ENSMUST00000182586 1366 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Cdhr3Q8BL00 Cldn4-201ENSMUST00000051401 1816 ntAPPRIS P1 BASIC14.76□□□□□ -0.05
Cdhr3Q8BL00 Pacs2-202ENSMUST00000220541 3101 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Cdhr3Q8BL00 Fbxo9-202ENSMUST00000085311 2155 ntAPPRIS ALT1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Cdhr3Q8BL00 Synpo-206ENSMUST00000130360 5159 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Cdhr3Q8BL00 Gm12216-203ENSMUST00000121435 655 ntAPPRIS ALT2 TSL 5 BASIC14.76□□□□□ -0.05
Cdhr3Q8BL00 Gm12382-201ENSMUST00000122005 922 ntBASIC14.76□□□□□ -0.05
Cdhr3Q8BL00 Gm24841-201ENSMUST00000158676 357 ntBASIC14.76□□□□□ -0.05
Cdhr3Q8BL00 Gm10517-202ENSMUST00000192970 758 ntBASIC14.76□□□□□ -0.05
Cdhr3Q8BL00 Ltb-201ENSMUST00000025262 1160 ntAPPRIS P2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Cdhr3Q8BL00 Clybl-201ENSMUST00000026625 1231 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Cdhr3Q8BL00 Gm10602-201ENSMUST00000098239 609 ntBASIC14.76□□□□□ -0.05
Cdhr3Q8BL00 Ankrd17-203ENSMUST00000168058 9311 ntAPPRIS ALT2 TSL 5 BASIC14.76□□□□□ -0.05
Cdhr3Q8BL00 Plbd2-201ENSMUST00000031597 4208 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Cdhr3Q8BL00 Ina-201ENSMUST00000037636 3240 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Cdhr3Q8BL00 Crebl2-201ENSMUST00000046303 3629 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Cdhr3Q8BL00 Nr1h2-201ENSMUST00000073488 1999 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
Cdhr3Q8BL00 Nploc4-201ENSMUST00000044271 4121 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Cdhr3Q8BL00 Trim45-202ENSMUST00000094048 1815 ntTSL 5 BASIC14.76□□□□□ -0.05
Cdhr3Q8BL00 Aaed1-202ENSMUST00000220895 2858 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Cdhr3Q8BL00 Wrb-201ENSMUST00000023913 2495 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Cdhr3Q8BL00 Rbm12b2-202ENSMUST00000095143 3147 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Cdhr3Q8BL00 March2-201ENSMUST00000066121 3400 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Cdhr3Q8BL00 Tlk2-204ENSMUST00000106941 3699 ntAPPRIS ALT1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Cdhr3Q8BL00 Fbxl21-203ENSMUST00000121871 1963 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Cdhr3Q8BL00 H2-Q10-202ENSMUST00000174525 1991 ntAPPRIS P1 TSL 5 BASIC14.75□□□□□ -0.05
Cdhr3Q8BL00 Snrnp35-202ENSMUST00000111453 1181 ntAPPRIS P1 TSL 2 BASIC14.75□□□□□ -0.05
Cdhr3Q8BL00 Gtf2a2-204ENSMUST00000119905 622 ntTSL 2 BASIC14.75□□□□□ -0.05
Cdhr3Q8BL00 Prss16-204ENSMUST00000150547 1159 ntTSL 3 BASIC14.75□□□□□ -0.05
Cdhr3Q8BL00 Gm20635-201ENSMUST00000176473 1287 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Cdhr3Q8BL00 E030044B06Rik-201ENSMUST00000181195 1266 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Cdhr3Q8BL00 Tmem57-201ENSMUST00000030628 3826 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Cdhr3Q8BL00 Fam50b-201ENSMUST00000039605 1229 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Cdhr3Q8BL00 Gm11273-201ENSMUST00000044043 390 ntAPPRIS P1 BASIC14.75□□□□□ -0.05
Cdhr3Q8BL00 Gnb1-202ENSMUST00000105616 3088 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Cdhr3Q8BL00 Mboat4-201ENSMUST00000095345 1836 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Cdhr3Q8BL00 Pdss2-201ENSMUST00000095725 2127 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Cdhr3Q8BL00 Mis18bp1-208ENSMUST00000222244 2053 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Cdhr3Q8BL00 Ankrd29-201ENSMUST00000118525 3242 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Cdhr3Q8BL00 Lrp8-201ENSMUST00000030356 4555 ntAPPRIS P5 TSL 5 BASIC14.75□□□□□ -0.05
Cdhr3Q8BL00 Dyx1c1-201ENSMUST00000034734 1975 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
Cdhr3Q8BL00 Stk33-201ENSMUST00000090414 2221 ntAPPRIS P1 TSL 5 BASIC14.74□□□□□ -0.05
Cdhr3Q8BL00 Anapc7-201ENSMUST00000031422 2751 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Cdhr3Q8BL00 AL590614.2-201ENSMUST00000225374 1937 ntBASIC14.74□□□□□ -0.05
Cdhr3Q8BL00 Slc38a10-202ENSMUST00000053692 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Cdhr3Q8BL00 Fam120c-201ENSMUST00000073364 5463 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Cdhr3Q8BL00 Ell2-201ENSMUST00000001583 4382 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Cdhr3Q8BL00 G3bp2-204ENSMUST00000169094 2716 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
Cdhr3Q8BL00 Acap3-201ENSMUST00000079031 4301 ntTSL 5 BASIC14.74□□□□□ -0.05
Cdhr3Q8BL00 Gldc-201ENSMUST00000025778 3754 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Cdhr3Q8BL00 BC030336-201ENSMUST00000060175 4831 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Cdhr3Q8BL00 Unc13b-201ENSMUST00000079978 6354 ntAPPRIS P2 TSL 5 BASIC14.74□□□□□ -0.05
Retrieved 100 of 76,532 protein–RNA pairs in 29 ms