Protein–RNA interactions for Protein: Q8BK35

Nop53, Ribosome biogenesis protein NOP53, mousemouse

Known RBP Predictions only

Length 484 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nop53Q8BK35 Slc22a12-201ENSMUST00000113451 2213 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Nop53Q8BK35 Cxcl14-201ENSMUST00000021970 1827 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Nop53Q8BK35 Gm45774-201ENSMUST00000211992 2665 ntBASIC18.14■□□□□ 0.49
Nop53Q8BK35 Msi2-201ENSMUST00000092794 1855 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Nop53Q8BK35 Sec61a1-201ENSMUST00000032168 3172 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Nop53Q8BK35 Mrpl9-201ENSMUST00000029786 1612 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Nop53Q8BK35 Tmem163-203ENSMUST00000160616 2657 ntAPPRIS P1 TSL 2 BASIC18.13■□□□□ 0.49
Nop53Q8BK35 Rhof-201ENSMUST00000031401 2208 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Nop53Q8BK35 Flywch2-201ENSMUST00000024704 694 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Nop53Q8BK35 Tmem192-201ENSMUST00000026595 1122 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Nop53Q8BK35 Cck-201ENSMUST00000035120 691 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Nop53Q8BK35 C230012O17Rik-201ENSMUST00000130085 2999 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Nop53Q8BK35 Lrrc73-201ENSMUST00000095262 1384 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Nop53Q8BK35 Cadps2-201ENSMUST00000018122 4723 ntAPPRIS P3 TSL 5 BASIC18.13■□□□□ 0.49
Nop53Q8BK35 Emc8-201ENSMUST00000034277 4942 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Nop53Q8BK35 Cwh43-201ENSMUST00000031040 2716 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Nop53Q8BK35 Zbtb9-201ENSMUST00000120016 2798 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Nop53Q8BK35 Sept10-203ENSMUST00000220156 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Nop53Q8BK35 Mboat4-201ENSMUST00000095345 1836 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Nop53Q8BK35 Smim3-201ENSMUST00000042710 1984 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Nop53Q8BK35 Tead3-205ENSMUST00000154873 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Nop53Q8BK35 Bex3-202ENSMUST00000113112 826 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Nop53Q8BK35 Serf1-204ENSMUST00000151821 570 ntTSL 2 BASIC18.12■□□□□ 0.49
Nop53Q8BK35 4930554G22Rik-201ENSMUST00000196102 686 ntBASIC18.12■□□□□ 0.49
Nop53Q8BK35 Gm42545-201ENSMUST00000202755 922 ntBASIC18.12■□□□□ 0.49
Nop53Q8BK35 Gm18025-201ENSMUST00000221733 862 ntBASIC18.12■□□□□ 0.49
Nop53Q8BK35 Zfx-204ENSMUST00000113927 6933 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
Nop53Q8BK35 Shank1-203ENSMUST00000107938 9826 ntAPPRIS P2 TSL 5 BASIC18.12■□□□□ 0.49
Nop53Q8BK35 9530080O11Rik-201ENSMUST00000137239 1475 ntTSL 2 BASIC18.12■□□□□ 0.49
Nop53Q8BK35 Cnksr1-201ENSMUST00000030645 2468 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Nop53Q8BK35 Mmd-202ENSMUST00000107887 1654 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Nop53Q8BK35 Zranb2-203ENSMUST00000106058 2924 ntAPPRIS P2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Nop53Q8BK35 Gm27029-201ENSMUST00000107257 1898 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
Nop53Q8BK35 Yipf2-204ENSMUST00000213809 1883 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Nop53Q8BK35 Tasp1-201ENSMUST00000046656 2480 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Nop53Q8BK35 Zmynd15-203ENSMUST00000108563 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Nop53Q8BK35 Dlgap1-201ENSMUST00000060072 5420 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Nop53Q8BK35 Snrnp35-202ENSMUST00000111453 1181 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
Nop53Q8BK35 Gm18666-201ENSMUST00000190039 958 ntBASIC18.11■□□□□ 0.49
Nop53Q8BK35 Cdk2ap2-201ENSMUST00000025779 1080 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Nop53Q8BK35 Cox8a-201ENSMUST00000039758 545 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Nop53Q8BK35 Ghrhr-202ENSMUST00000203241 1328 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Nop53Q8BK35 Dhrs7-201ENSMUST00000021512 1385 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Nop53Q8BK35 Tspan4-201ENSMUST00000026585 1466 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Nop53Q8BK35 Cct6b-201ENSMUST00000021040 1787 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Nop53Q8BK35 Krt81-201ENSMUST00000061185 1857 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Nop53Q8BK35 Snx11-202ENSMUST00000107661 2197 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Nop53Q8BK35 Pds5b-208ENSMUST00000202170 6598 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
Nop53Q8BK35 Mbp-201ENSMUST00000047865 2492 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Nop53Q8BK35 Nsmf-203ENSMUST00000100334 2957 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Nop53Q8BK35 Caln1-203ENSMUST00000111288 9327 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Nop53Q8BK35 Serac1-201ENSMUST00000024570 2033 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
Nop53Q8BK35 Tra2a-204ENSMUST00000204189 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Nop53Q8BK35 Mmp28-204ENSMUST00000119346 1517 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Nop53Q8BK35 Tm7sf2-202ENSMUST00000113543 1498 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Nop53Q8BK35 Arrb2-203ENSMUST00000102563 1352 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Nop53Q8BK35 Mpz-202ENSMUST00000111334 1278 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Nop53Q8BK35 Gm13181-201ENSMUST00000120117 1069 ntBASIC18.1■□□□□ 0.49
Nop53Q8BK35 Tnfaip8l2-201ENSMUST00000013851 1122 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Nop53Q8BK35 Gm15723-201ENSMUST00000139331 600 ntTSL 3 BASIC18.1■□□□□ 0.49
Nop53Q8BK35 Stk39-201ENSMUST00000102715 3536 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Nop53Q8BK35 Nr3c2-203ENSMUST00000109912 5675 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Nop53Q8BK35 Rnf128-201ENSMUST00000113026 2750 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Nop53Q8BK35 Antxr2-202ENSMUST00000199088 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Nop53Q8BK35 Chka-202ENSMUST00000072055 2549 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
Nop53Q8BK35 Snap91-204ENSMUST00000098495 4150 ntAPPRIS P4 TSL 1 (best) BASIC18.1■□□□□ 0.49
Nop53Q8BK35 Tedc2-201ENSMUST00000024930 2166 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Nop53Q8BK35 Eif2ak3-201ENSMUST00000034093 4513 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Nop53Q8BK35 Gart-202ENSMUST00000120450 1865 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Nop53Q8BK35 Sars2-201ENSMUST00000094632 1868 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Nop53Q8BK35 Sco1-201ENSMUST00000092996 2412 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Nop53Q8BK35 Nanp-201ENSMUST00000066640 1394 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Nop53Q8BK35 Rpl36al-202ENSMUST00000110619 1276 ntAPPRIS P1 BASIC18.09■□□□□ 0.49
Nop53Q8BK35 Gm12382-201ENSMUST00000122005 922 ntBASIC18.09■□□□□ 0.49
Nop53Q8BK35 Ccdc58-202ENSMUST00000163352 970 ntTSL 3 BASIC18.09■□□□□ 0.49
Nop53Q8BK35 Ccdc58-203ENSMUST00000164916 1096 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Nop53Q8BK35 Il17re-208ENSMUST00000204774 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Nop53Q8BK35 Gm36736-201ENSMUST00000206060 646 ntTSL 3 BASIC18.09■□□□□ 0.49
Nop53Q8BK35 Cfap20-201ENSMUST00000034249 1295 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Nop53Q8BK35 Ttl-201ENSMUST00000035812 4567 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Nop53Q8BK35 Smim10l1-201ENSMUST00000100864 2842 ntAPPRIS P1 BASIC18.09■□□□□ 0.49
Nop53Q8BK35 Gbe1-201ENSMUST00000023393 2846 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
Nop53Q8BK35 Zkscan14-201ENSMUST00000031632 1967 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Nop53Q8BK35 Sox1ot-201ENSMUST00000080795 5064 ntTSL 5 BASIC18.09■□□□□ 0.49
Nop53Q8BK35 Dsg2-201ENSMUST00000059787 5766 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Nop53Q8BK35 Runx2-203ENSMUST00000113572 6463 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Nop53Q8BK35 Gm11620-201ENSMUST00000118770 1845 ntBASIC18.09■□□□□ 0.49
Nop53Q8BK35 Polr3e-203ENSMUST00000207481 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Nop53Q8BK35 Chn1-209ENSMUST00000166199 3876 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Nop53Q8BK35 Mipep-201ENSMUST00000063562 3015 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Nop53Q8BK35 Nadk2-203ENSMUST00000100790 3665 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
Nop53Q8BK35 B4galnt4-201ENSMUST00000048002 3556 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Nop53Q8BK35 Ubr3-201ENSMUST00000055758 8072 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Nop53Q8BK35 Lzts2-203ENSMUST00000179108 2781 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Nop53Q8BK35 Stox2-208ENSMUST00000211737 4573 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
Nop53Q8BK35 K230015D01Rik-201ENSMUST00000211969 1516 ntBASIC18.08■□□□□ 0.49
Nop53Q8BK35 E230001N04Rik-202ENSMUST00000181029 2091 ntBASIC18.08■□□□□ 0.49
Nop53Q8BK35 Scamp3-201ENSMUST00000029684 1489 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.49
Nop53Q8BK35 Ube2d3-202ENSMUST00000166033 2504 ntAPPRIS P2 TSL 1 (best) BASIC18.08■□□□□ 0.49
Nop53Q8BK35 Chrna4-201ENSMUST00000067120 4565 ntAPPRIS P2 TSL 1 (best) BASIC18.08■□□□□ 0.49
Retrieved 100 of 76,532 protein–RNA pairs in 28.6 ms