Protein–RNA interactions for Protein: Q8BJQ2

Usp1, Ubiquitin carboxyl-terminal hydrolase 1, mousemouse

Predictions only

Length 784 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp1Q8BJQ2 Prima1-201ENSMUST00000074416 909 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Usp1Q8BJQ2 Cdk10-201ENSMUST00000036880 1642 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Usp1Q8BJQ2 Misp-205ENSMUST00000219305 2569 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Usp1Q8BJQ2 Msl1-204ENSMUST00000107487 2836 ntAPPRIS ALT2 TSL 2 BASIC17.96■□□□□ 0.47
Usp1Q8BJQ2 Tmem241-205ENSMUST00000209859 1426 ntAPPRIS P4 TSL 1 (best) BASIC17.96■□□□□ 0.47
Usp1Q8BJQ2 Rnf26-208ENSMUST00000185479 2964 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Usp1Q8BJQ2 Zbtb25-201ENSMUST00000167011 1681 ntAPPRIS P1 TSL 2 BASIC17.96■□□□□ 0.47
Usp1Q8BJQ2 Sim1-202ENSMUST00000219436 1687 ntTSL 5 BASIC17.96■□□□□ 0.47
Usp1Q8BJQ2 Fam71e1-202ENSMUST00000205359 1307 ntAPPRIS ALT2 TSL 2 BASIC17.96■□□□□ 0.46
Usp1Q8BJQ2 Spg21-202ENSMUST00000213957 1302 ntTSL 1 (best) BASIC17.96■□□□□ 0.46
Usp1Q8BJQ2 Lrig1-201ENSMUST00000032105 4831 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.46
Usp1Q8BJQ2 Dtnbp1-203ENSMUST00000220555 1589 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.46
Usp1Q8BJQ2 Gpn3-201ENSMUST00000031420 1592 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.46
Usp1Q8BJQ2 Bean1-203ENSMUST00000167633 3275 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.46
Usp1Q8BJQ2 Ebf3-204ENSMUST00000169486 4994 ntAPPRIS ALT1 TSL 5 BASIC17.95■□□□□ 0.46
Usp1Q8BJQ2 Rsph6a-201ENSMUST00000035521 2354 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Usp1Q8BJQ2 Gm5828-201ENSMUST00000071842 1860 ntBASIC17.95■□□□□ 0.46
Usp1Q8BJQ2 A530016L24Rik-202ENSMUST00000223266 1547 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Usp1Q8BJQ2 Atp6v1g2-201ENSMUST00000068261 1528 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Usp1Q8BJQ2 1500009L16Rik-201ENSMUST00000150459 1194 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Usp1Q8BJQ2 Gm15890-201ENSMUST00000161024 770 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Usp1Q8BJQ2 Gm38973-201ENSMUST00000206810 878 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Usp1Q8BJQ2 Otx2os1-206ENSMUST00000228153 787 ntBASIC17.95■□□□□ 0.46
Usp1Q8BJQ2 Cmtm7-202ENSMUST00000084867 874 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Usp1Q8BJQ2 Scarf2-201ENSMUST00000012161 3302 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Usp1Q8BJQ2 Eva1c-201ENSMUST00000037539 1698 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Usp1Q8BJQ2 Gm5898-201ENSMUST00000121016 2071 ntBASIC17.95■□□□□ 0.46
Usp1Q8BJQ2 Hjurp-202ENSMUST00000065420 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Usp1Q8BJQ2 Aqp5-202ENSMUST00000169082 1551 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Usp1Q8BJQ2 Nadk2-202ENSMUST00000100789 3578 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
Usp1Q8BJQ2 Atp5c1-202ENSMUST00000114896 1735 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Usp1Q8BJQ2 Rnf157-202ENSMUST00000106398 4553 ntAPPRIS ALT2 TSL 5 BASIC17.94■□□□□ 0.46
Usp1Q8BJQ2 Pcdhac2-201ENSMUST00000047479 5888 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Usp1Q8BJQ2 Runx1t1-201ENSMUST00000006761 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Usp1Q8BJQ2 3110043O21Rik-203ENSMUST00000108127 3193 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Usp1Q8BJQ2 Gm29514-202ENSMUST00000186665 2214 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Usp1Q8BJQ2 Prpsap1-201ENSMUST00000106391 1841 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Usp1Q8BJQ2 Meg3-201ENSMUST00000124106 1988 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Usp1Q8BJQ2 C030037D09Rik-202ENSMUST00000136201 1216 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Usp1Q8BJQ2 Ighv6-1-201ENSMUST00000193612 343 ntBASIC17.94■□□□□ 0.46
Usp1Q8BJQ2 Odf3b-201ENSMUST00000049968 1040 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Usp1Q8BJQ2 6330411D24Rik-201ENSMUST00000211105 1568 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Usp1Q8BJQ2 Fgfr2-211ENSMUST00000120187 4311 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Usp1Q8BJQ2 Idh1-201ENSMUST00000097709 2302 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Usp1Q8BJQ2 Elac2-203ENSMUST00000108697 2612 ntAPPRIS ALT2 TSL 5 BASIC17.94■□□□□ 0.46
Usp1Q8BJQ2 Gm6598-201ENSMUST00000202719 2615 ntBASIC17.94■□□□□ 0.46
Usp1Q8BJQ2 Icam5-201ENSMUST00000019616 2947 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Usp1Q8BJQ2 Gm14029-201ENSMUST00000151051 1348 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Usp1Q8BJQ2 Gpsm3-201ENSMUST00000038244 1343 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Usp1Q8BJQ2 Gcat-202ENSMUST00000171999 1763 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Usp1Q8BJQ2 Matn4-202ENSMUST00000103104 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Usp1Q8BJQ2 Gm7292-201ENSMUST00000194706 2527 ntBASIC17.94■□□□□ 0.46
Usp1Q8BJQ2 Slc16a3-201ENSMUST00000070653 2272 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Usp1Q8BJQ2 Epn1-207ENSMUST00000208634 2127 ntAPPRIS ALT2 TSL 5 BASIC17.93■□□□□ 0.46
Usp1Q8BJQ2 Spata18-202ENSMUST00000071077 1978 ntAPPRIS P2 TSL 5 BASIC17.93■□□□□ 0.46
Usp1Q8BJQ2 H2-Q7-202ENSMUST00000076256 1523 ntAPPRIS ALT2 TSL 5 BASIC17.93■□□□□ 0.46
Usp1Q8BJQ2 Zfp865-203ENSMUST00000085427 2751 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Usp1Q8BJQ2 Uso1-204ENSMUST00000202155 3707 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Usp1Q8BJQ2 Krt15-201ENSMUST00000107411 1700 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Usp1Q8BJQ2 Hps4-201ENSMUST00000035279 2836 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Usp1Q8BJQ2 Urah-202ENSMUST00000106050 719 ntAPPRIS ALT2 TSL 2 BASIC17.93■□□□□ 0.46
Usp1Q8BJQ2 Umpk-ps-201ENSMUST00000211897 827 ntBASIC17.93■□□□□ 0.46
Usp1Q8BJQ2 Spem1-201ENSMUST00000045771 1041 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Usp1Q8BJQ2 Pcdh7-201ENSMUST00000068110 5611 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
Usp1Q8BJQ2 Kcns2-201ENSMUST00000072868 5456 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Usp1Q8BJQ2 Ankrd39-201ENSMUST00000001172 2109 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Usp1Q8BJQ2 2810408A11Rik-204ENSMUST00000108621 1455 ntAPPRIS ALT2 TSL 5 BASIC17.93■□□□□ 0.46
Usp1Q8BJQ2 Agbl5-209ENSMUST00000201225 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Usp1Q8BJQ2 Rybp-201ENSMUST00000101118 4503 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Usp1Q8BJQ2 A930017K11Rik-201ENSMUST00000162431 2539 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Usp1Q8BJQ2 Ubald1-201ENSMUST00000037843 1851 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Usp1Q8BJQ2 Prdm6-203ENSMUST00000115399 2227 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Usp1Q8BJQ2 Prmt2-202ENSMUST00000099571 2052 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
Usp1Q8BJQ2 Asnsd1-201ENSMUST00000027264 2442 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Usp1Q8BJQ2 Map3k1-201ENSMUST00000109267 6978 ntAPPRIS P1 TSL 2 BASIC17.92■□□□□ 0.46
Usp1Q8BJQ2 Akain1-201ENSMUST00000169935 2296 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Usp1Q8BJQ2 Dnajc2-201ENSMUST00000030771 2133 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Usp1Q8BJQ2 Tsc22d1-201ENSMUST00000022587 1762 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Usp1Q8BJQ2 Pyy-201ENSMUST00000017455 555 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
Usp1Q8BJQ2 4933412L11Rik-201ENSMUST00000203702 1044 ntBASIC17.92■□□□□ 0.46
Usp1Q8BJQ2 Ptcra-201ENSMUST00000041012 1283 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Usp1Q8BJQ2 Ahnak-201ENSMUST00000092955 1046 ntAPPRIS ALT2 TSL 2 BASIC17.92■□□□□ 0.46
Usp1Q8BJQ2 9330160F10Rik-201ENSMUST00000101007 2766 ntBASIC17.92■□□□□ 0.46
Usp1Q8BJQ2 Letm1-201ENSMUST00000005431 5272 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Usp1Q8BJQ2 Vsig10l-204ENSMUST00000203769 2473 ntAPPRIS P2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Usp1Q8BJQ2 Zcchc6-207ENSMUST00000225576 2499 ntBASIC17.92■□□□□ 0.46
Usp1Q8BJQ2 Klhl5-204ENSMUST00000204097 3149 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Usp1Q8BJQ2 Hspb6-201ENSMUST00000044048 1363 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Usp1Q8BJQ2 Shq1-204ENSMUST00000170667 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Usp1Q8BJQ2 Appl2-201ENSMUST00000020500 3020 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Usp1Q8BJQ2 Isyna1-201ENSMUST00000019283 1836 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Usp1Q8BJQ2 Nfib-204ENSMUST00000107246 3075 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Usp1Q8BJQ2 Rnf186-201ENSMUST00000116094 1249 ntAPPRIS P1 BASIC17.91■□□□□ 0.46
Usp1Q8BJQ2 Hist1h2bc-201ENSMUST00000018246 1156 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Usp1Q8BJQ2 Nudt17-204ENSMUST00000200387 2108 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Usp1Q8BJQ2 Ifi27l2b-201ENSMUST00000044687 1093 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Usp1Q8BJQ2 Hist1h2ba-201ENSMUST00000052776 384 ntAPPRIS P1 BASIC17.91■□□□□ 0.46
Usp1Q8BJQ2 Dlgap1-206ENSMUST00000133717 2355 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
Usp1Q8BJQ2 Timm17b-201ENSMUST00000033498 2381 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Usp1Q8BJQ2 Nr1d2-201ENSMUST00000090543 4663 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Retrieved 100 of 76,532 protein–RNA pairs in 20.1 ms