Protein–RNA interactions for Protein: Q80YF6

Upk3b, Uroplakin-3b, mousemouse

Predictions only

Length 275 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upk3bQ80YF6 Chn1-210ENSMUST00000180045 4050 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Upk3bQ80YF6 Acot7-203ENSMUST00000105652 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Upk3bQ80YF6 Lrrc7-204ENSMUST00000199890 6326 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Upk3bQ80YF6 Gabrb3-201ENSMUST00000039697 5579 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Upk3bQ80YF6 Paqr9-201ENSMUST00000079597 8367 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
Upk3bQ80YF6 Rbm12b1-202ENSMUST00000069128 3069 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Upk3bQ80YF6 Kif7-201ENSMUST00000059836 4521 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
Upk3bQ80YF6 Megf11-210ENSMUST00000164113 6018 ntTSL 5 BASIC14.32□□□□□ -0.12
Upk3bQ80YF6 Heyl-201ENSMUST00000040821 4537 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Upk3bQ80YF6 Ptgis-201ENSMUST00000018113 2107 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Upk3bQ80YF6 Nox4-202ENSMUST00000068829 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Upk3bQ80YF6 2900052L18Rik-201ENSMUST00000139014 1588 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Upk3bQ80YF6 Gm20532-201ENSMUST00000174066 780 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
Upk3bQ80YF6 Gm3764-202ENSMUST00000180582 440 ntTSL 5 BASIC14.32□□□□□ -0.12
Upk3bQ80YF6 Flywch2-201ENSMUST00000024704 694 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Upk3bQ80YF6 Tceanc2-201ENSMUST00000030362 935 ntAPPRIS P1 TSL 3 BASIC14.32□□□□□ -0.12
Upk3bQ80YF6 Evpl-201ENSMUST00000037007 6384 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
Upk3bQ80YF6 Nipsnap1-201ENSMUST00000038570 1926 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Upk3bQ80YF6 C2cd2-201ENSMUST00000170757 6555 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Upk3bQ80YF6 Gramd4-204ENSMUST00000138134 4292 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Upk3bQ80YF6 4930474N05Rik-203ENSMUST00000226305 2313 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
Upk3bQ80YF6 Adcy5-201ENSMUST00000114913 7007 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Upk3bQ80YF6 Serac1-201ENSMUST00000024570 2033 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
Upk3bQ80YF6 Sema6c-214ENSMUST00000202315 2843 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
Upk3bQ80YF6 Tmem8b-203ENSMUST00000107866 4998 ntTSL 5 BASIC14.32□□□□□ -0.12
Upk3bQ80YF6 Rapgef3-207ENSMUST00000134885 1422 ntTSL 5 BASIC14.32□□□□□ -0.12
Upk3bQ80YF6 Capn15-205ENSMUST00000212520 5216 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Upk3bQ80YF6 Aqp1-201ENSMUST00000004774 2627 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Upk3bQ80YF6 Gldc-201ENSMUST00000025778 3754 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Upk3bQ80YF6 Pdgfa-201ENSMUST00000046901 1543 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Upk3bQ80YF6 Kcnq2-201ENSMUST00000016491 3067 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Upk3bQ80YF6 Ino80e-203ENSMUST00000106343 1973 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Upk3bQ80YF6 Wnt1-201ENSMUST00000023734 2378 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Upk3bQ80YF6 1700066B19Rik-201ENSMUST00000097617 2504 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Upk3bQ80YF6 Taz-208ENSMUST00000132437 768 ntTSL 3 BASIC14.31□□□□□ -0.12
Upk3bQ80YF6 Tmbim6-202ENSMUST00000159209 944 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
Upk3bQ80YF6 Gm44672-201ENSMUST00000206944 1098 ntBASIC14.31□□□□□ -0.12
Upk3bQ80YF6 Gm45337-201ENSMUST00000210537 1267 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
Upk3bQ80YF6 Exosc3-201ENSMUST00000030003 1077 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Upk3bQ80YF6 Plekha4-202ENSMUST00000209517 2577 ntAPPRIS P2 TSL 5 BASIC14.31□□□□□ -0.12
Upk3bQ80YF6 Gsto2-201ENSMUST00000056159 1351 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Upk3bQ80YF6 Lrrc73-201ENSMUST00000095262 1384 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Upk3bQ80YF6 Mapk9-205ENSMUST00000109179 4682 ntTSL 5 BASIC14.31□□□□□ -0.12
Upk3bQ80YF6 Mapk9-209ENSMUST00000164643 4682 ntTSL 5 BASIC14.31□□□□□ -0.12
Upk3bQ80YF6 Mycs-201ENSMUST00000058404 2368 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
Upk3bQ80YF6 2810408A11Rik-201ENSMUST00000018714 1485 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Upk3bQ80YF6 Gm45560-201ENSMUST00000211492 1472 ntBASIC14.31□□□□□ -0.12
Upk3bQ80YF6 Adamts17-202ENSMUST00000107478 6416 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
Upk3bQ80YF6 Hnrnpll-205ENSMUST00000184635 3009 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Upk3bQ80YF6 Nyx-201ENSMUST00000050434 5183 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Upk3bQ80YF6 Atp6v1c1-201ENSMUST00000022904 2071 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Upk3bQ80YF6 Pdk3-201ENSMUST00000045748 2115 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Upk3bQ80YF6 Zfp367-202ENSMUST00000117241 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Upk3bQ80YF6 Fancg-201ENSMUST00000030165 2771 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Upk3bQ80YF6 Trim31-201ENSMUST00000078438 2257 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Upk3bQ80YF6 Gbx1-201ENSMUST00000088311 3475 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Upk3bQ80YF6 Timm44-201ENSMUST00000003029 1790 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Upk3bQ80YF6 Chd4-202ENSMUST00000112390 6537 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
Upk3bQ80YF6 Ankrd44-210ENSMUST00000179030 6140 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Upk3bQ80YF6 Pex5-202ENSMUST00000080557 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Upk3bQ80YF6 Acap3-201ENSMUST00000079031 4301 ntTSL 5 BASIC14.3□□□□□ -0.12
Upk3bQ80YF6 Wasf2-201ENSMUST00000084241 5642 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Upk3bQ80YF6 Smim27-201ENSMUST00000129758 1044 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Upk3bQ80YF6 AC107711.5-202ENSMUST00000226429 702 ntBASIC14.3□□□□□ -0.12
Upk3bQ80YF6 Arid3c-202ENSMUST00000150809 1327 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Upk3bQ80YF6 Praf2-201ENSMUST00000033489 1339 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Upk3bQ80YF6 Flvcr1-201ENSMUST00000085635 4040 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Upk3bQ80YF6 Fhl1-203ENSMUST00000114769 2770 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Upk3bQ80YF6 Matr3-214ENSMUST00000190029 2845 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
Upk3bQ80YF6 Matn4-201ENSMUST00000103103 2304 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Upk3bQ80YF6 Tra2a-204ENSMUST00000204189 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Upk3bQ80YF6 Kank3-202ENSMUST00000172649 2652 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Upk3bQ80YF6 Mettl21a-201ENSMUST00000053469 2666 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Upk3bQ80YF6 Dlgap1-207ENSMUST00000133983 7173 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Upk3bQ80YF6 Nrip1-201ENSMUST00000054178 4529 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Upk3bQ80YF6 Adamtsl1-201ENSMUST00000048885 1842 ntTSL 5 BASIC14.29□□□□□ -0.12
Upk3bQ80YF6 Slc46a1-201ENSMUST00000001126 1978 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Upk3bQ80YF6 Sh2b1-203ENSMUST00000205440 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Upk3bQ80YF6 Arfip2-202ENSMUST00000084782 2254 ntAPPRIS P2 TSL 5 BASIC14.29□□□□□ -0.12
Upk3bQ80YF6 Phf1-201ENSMUST00000073724 2429 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Upk3bQ80YF6 Sh2b3-201ENSMUST00000040308 2530 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
Upk3bQ80YF6 Gm18284-201ENSMUST00000172604 624 ntBASIC14.29□□□□□ -0.12
Upk3bQ80YF6 Krtcap3-205ENSMUST00000201625 902 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
Upk3bQ80YF6 Pts-208ENSMUST00000215416 439 ntTSL 2 BASIC14.29□□□□□ -0.12
Upk3bQ80YF6 AC122769.4-201ENSMUST00000228166 901 ntBASIC14.29□□□□□ -0.12
Upk3bQ80YF6 Olfr322-201ENSMUST00000072030 984 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
Upk3bQ80YF6 Dtx2-201ENSMUST00000005072 2562 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
Upk3bQ80YF6 Scube3-201ENSMUST00000043503 6699 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Upk3bQ80YF6 Osbpl1a-208ENSMUST00000121888 2674 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Upk3bQ80YF6 Trabd-206ENSMUST00000169891 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Upk3bQ80YF6 Hivep3-201ENSMUST00000084306 2973 ntBASIC14.29□□□□□ -0.12
Upk3bQ80YF6 BC029722-201ENSMUST00000124586 1615 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Upk3bQ80YF6 Tox2-205ENSMUST00000165937 1675 ntAPPRIS P2 TSL 5 BASIC14.29□□□□□ -0.12
Upk3bQ80YF6 Fosl1-201ENSMUST00000025850 1707 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Upk3bQ80YF6 Uts2r-201ENSMUST00000039044 1703 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
Upk3bQ80YF6 Eif4g1-202ENSMUST00000073840 5394 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
Upk3bQ80YF6 Ror1-201ENSMUST00000039630 5762 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Upk3bQ80YF6 H2-Q10-202ENSMUST00000174525 1991 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
Upk3bQ80YF6 Ran-201ENSMUST00000031383 2377 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Upk3bQ80YF6 Tead3-201ENSMUST00000114799 2448 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 50 ms