Protein–RNA interactions for Protein: Q80W14

Prpf40b, Pre-mRNA-processing factor 40 homolog B, mousemouse

Predictions only

Length 870 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf40bQ80W14 Trim54-202ENSMUST00000202769 1408 ntAPPRIS ALT1 TSL 5 BASIC19.47■□□□□ 0.71
Prpf40bQ80W14 Npas3-203ENSMUST00000223057 2724 ntAPPRIS ALT2 TSL 5 BASIC19.47■□□□□ 0.71
Prpf40bQ80W14 Il17re-201ENSMUST00000053569 1898 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Prpf40bQ80W14 Gm17484-201ENSMUST00000167899 2322 ntTSL 2 BASIC19.47■□□□□ 0.71
Prpf40bQ80W14 Trap1-201ENSMUST00000006137 2320 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Prpf40bQ80W14 Dlx3-201ENSMUST00000092768 2607 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Prpf40bQ80W14 Mirt1-201ENSMUST00000180489 5292 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Prpf40bQ80W14 Fam166b-201ENSMUST00000052829 1349 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Prpf40bQ80W14 Osgin2-201ENSMUST00000037198 2658 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Prpf40bQ80W14 Fam20c-201ENSMUST00000026972 3582 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Prpf40bQ80W14 Ints8-202ENSMUST00000108318 3169 ntTSL 5 BASIC19.46■□□□□ 0.71
Prpf40bQ80W14 Il4i1-202ENSMUST00000118125 2275 ntAPPRIS ALT2 TSL 2 BASIC19.46■□□□□ 0.71
Prpf40bQ80W14 Isyna1-201ENSMUST00000019283 1836 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Prpf40bQ80W14 Atp2c1-201ENSMUST00000038118 4876 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
Prpf40bQ80W14 Vhl-201ENSMUST00000035673 2792 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Prpf40bQ80W14 Mark3-201ENSMUST00000075281 3321 ntAPPRIS P2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Prpf40bQ80W14 Rnf141-201ENSMUST00000106682 1101 ntAPPRIS P1 TSL 3 BASIC19.46■□□□□ 0.71
Prpf40bQ80W14 Gm15510-201ENSMUST00000123644 1172 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Prpf40bQ80W14 Celrr-203ENSMUST00000185678 937 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Prpf40bQ80W14 Proser2-201ENSMUST00000054254 2061 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Prpf40bQ80W14 Fam69a-201ENSMUST00000031198 2721 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Prpf40bQ80W14 Kmt5b-203ENSMUST00000113968 3216 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Prpf40bQ80W14 Gm42417-201ENSMUST00000191849 2256 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Prpf40bQ80W14 Arpc1a-201ENSMUST00000031625 1632 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Prpf40bQ80W14 Abhd10-201ENSMUST00000066983 2848 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Prpf40bQ80W14 Phtf1-203ENSMUST00000090685 3006 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Prpf40bQ80W14 Eif6-201ENSMUST00000029142 1500 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Prpf40bQ80W14 Dut-201ENSMUST00000051605 1950 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Prpf40bQ80W14 Apbb1-214ENSMUST00000189378 2878 ntAPPRIS ALT1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Prpf40bQ80W14 Cspg5-202ENSMUST00000196060 3790 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Prpf40bQ80W14 Krt73-201ENSMUST00000063292 2165 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Prpf40bQ80W14 Gm13884-201ENSMUST00000118103 829 ntBASIC19.45■□□□□ 0.7
Prpf40bQ80W14 Gm26039-201ENSMUST00000158152 144 ntBASIC19.45■□□□□ 0.7
Prpf40bQ80W14 Mir8098-201ENSMUST00000184011 137 ntBASIC19.45■□□□□ 0.7
Prpf40bQ80W14 Tsks-201ENSMUST00000080233 1806 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
Prpf40bQ80W14 Ndufaf3-201ENSMUST00000074208 1487 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Prpf40bQ80W14 Phf20l1-201ENSMUST00000048188 6670 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
Prpf40bQ80W14 Sart1-201ENSMUST00000044207 5091 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Prpf40bQ80W14 Nrxn1-217ENSMUST00000174337 3021 ntTSL 5 BASIC19.45■□□□□ 0.7
Prpf40bQ80W14 Ddx28-201ENSMUST00000058579 2262 ntAPPRIS P1 BASIC19.45■□□□□ 0.7
Prpf40bQ80W14 Ndufv3-201ENSMUST00000046288 1537 ntAPPRIS P4 TSL 1 (best) BASIC19.45■□□□□ 0.7
Prpf40bQ80W14 Armc10-202ENSMUST00000095495 2700 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Prpf40bQ80W14 Kank3-201ENSMUST00000048560 2641 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Prpf40bQ80W14 Blmh-201ENSMUST00000021197 2497 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Prpf40bQ80W14 Tnfrsf25-201ENSMUST00000025706 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Prpf40bQ80W14 4930526A20Rik-201ENSMUST00000134228 941 ntBASIC19.44■□□□□ 0.7
Prpf40bQ80W14 Gm8797-201ENSMUST00000192045 490 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
Prpf40bQ80W14 Imp3-201ENSMUST00000034827 924 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
Prpf40bQ80W14 Lce3c-201ENSMUST00000055375 567 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Prpf40bQ80W14 Pdap1-201ENSMUST00000031627 2353 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Prpf40bQ80W14 Raver2-201ENSMUST00000038463 4045 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Prpf40bQ80W14 Acadvl-201ENSMUST00000018718 2020 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
Prpf40bQ80W14 Vkorc1l1-203ENSMUST00000201855 4809 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Prpf40bQ80W14 Grip1-201ENSMUST00000041962 5343 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Prpf40bQ80W14 Nek9-201ENSMUST00000040992 5386 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Prpf40bQ80W14 Itsn1-201ENSMUST00000056482 5364 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Prpf40bQ80W14 Tm6sf2-201ENSMUST00000049197 1418 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
Prpf40bQ80W14 Prss53-202ENSMUST00000205300 1662 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Prpf40bQ80W14 Chpt1-201ENSMUST00000020253 3898 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
Prpf40bQ80W14 Man1c1-202ENSMUST00000054096 4715 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
Prpf40bQ80W14 Hmbox1-203ENSMUST00000175744 1771 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Prpf40bQ80W14 Cyhr1-204ENSMUST00000177359 1110 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Prpf40bQ80W14 Gm26756-201ENSMUST00000181689 1294 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Prpf40bQ80W14 Ndufaf8-202ENSMUST00000185558 427 ntTSL 5 BASIC19.43■□□□□ 0.7
Prpf40bQ80W14 Timm13-204ENSMUST00000219896 542 ntTSL 3 BASIC19.43■□□□□ 0.7
Prpf40bQ80W14 Usp48-201ENSMUST00000055131 5722 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Prpf40bQ80W14 Krt19-201ENSMUST00000007317 1576 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Prpf40bQ80W14 Rnf157-202ENSMUST00000106398 4553 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
Prpf40bQ80W14 St7l-202ENSMUST00000106769 2428 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Prpf40bQ80W14 Vsig10l-204ENSMUST00000203769 2473 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Prpf40bQ80W14 Rmnd1-201ENSMUST00000042251 3139 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Prpf40bQ80W14 Misp-205ENSMUST00000219305 2569 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Prpf40bQ80W14 Slc35e1-202ENSMUST00000152080 4383 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Prpf40bQ80W14 Wt1-205ENSMUST00000143043 3090 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Prpf40bQ80W14 Pcnx-204ENSMUST00000221721 8318 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
Prpf40bQ80W14 Gm43294-201ENSMUST00000202850 2490 ntBASIC19.42■□□□□ 0.7
Prpf40bQ80W14 Tbc1d9-202ENSMUST00000093393 5334 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Prpf40bQ80W14 Mir770-201ENSMUST00000103252 94 ntBASIC19.42■□□□□ 0.7
Prpf40bQ80W14 D330023K18Rik-201ENSMUST00000133550 920 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Prpf40bQ80W14 Rhox13-201ENSMUST00000152730 876 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Prpf40bQ80W14 Gm15889-201ENSMUST00000159142 1083 ntTSL 3 BASIC19.42■□□□□ 0.7
Prpf40bQ80W14 Ino80dos-204ENSMUST00000188602 678 ntTSL 2 BASIC19.42■□□□□ 0.7
Prpf40bQ80W14 Ankrd23-204ENSMUST00000194853 1073 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Prpf40bQ80W14 Sox6os-201ENSMUST00000032900 420 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Prpf40bQ80W14 Odf3b-201ENSMUST00000049968 1040 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Prpf40bQ80W14 Gm9857-201ENSMUST00000050914 393 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
Prpf40bQ80W14 Ppm1a-201ENSMUST00000021514 7668 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Prpf40bQ80W14 Bmi1-201ENSMUST00000028071 3594 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Prpf40bQ80W14 Cyp2r1-201ENSMUST00000032908 1627 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Prpf40bQ80W14 Ebf3-204ENSMUST00000169486 4994 ntAPPRIS ALT1 TSL 5 BASIC19.42■□□□□ 0.7
Prpf40bQ80W14 Wipf1-201ENSMUST00000094681 4728 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Prpf40bQ80W14 Ppt2-205ENSMUST00000169067 1392 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
Prpf40bQ80W14 Atp8b2-201ENSMUST00000069805 5559 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
Prpf40bQ80W14 Mindy2-201ENSMUST00000049031 8081 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Prpf40bQ80W14 Enpp1-202ENSMUST00000105520 6777 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
Prpf40bQ80W14 1700041G16Rik-202ENSMUST00000186344 1824 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Prpf40bQ80W14 Trim24-201ENSMUST00000031859 4042 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
Prpf40bQ80W14 Gm17055-201ENSMUST00000166951 2232 ntTSL 5 BASIC19.41■□□□□ 0.7
Prpf40bQ80W14 Scly-201ENSMUST00000027532 2202 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Prpf40bQ80W14 Zxdc-203ENSMUST00000113539 4864 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Retrieved 100 of 76,532 protein–RNA pairs in 121.7 ms