Protein–RNA interactions for Protein: Q7M729

Scn4b, Sodium channel subunit beta-4, mousemouse

Predictions only

Length 228 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn4bQ7M729 Coq8b-202ENSMUST00000108378 2276 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Scn4bQ7M729 Dap-201ENSMUST00000044524 1555 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Scn4bQ7M729 Tasp1-201ENSMUST00000046656 2480 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Scn4bQ7M729 Cyb561d2-201ENSMUST00000041459 1786 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Scn4bQ7M729 Zfp865-203ENSMUST00000085427 2751 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Scn4bQ7M729 Rbpms2-201ENSMUST00000055844 1987 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Scn4bQ7M729 Elk4-202ENSMUST00000086556 4433 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Scn4bQ7M729 Gm26592-201ENSMUST00000180870 1730 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Scn4bQ7M729 B430219N15Rik-201ENSMUST00000147230 835 ntTSL 2 BASIC16.46■□□□□ 0.23
Scn4bQ7M729 Rcbtb2-217ENSMUST00000167401 868 ntTSL 5 BASIC16.46■□□□□ 0.23
Scn4bQ7M729 Zfas1-205ENSMUST00000189909 738 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Scn4bQ7M729 Gm7791-201ENSMUST00000219066 539 ntBASIC16.46■□□□□ 0.23
Scn4bQ7M729 Il3ra-202ENSMUST00000223589 738 ntBASIC16.46■□□□□ 0.23
Scn4bQ7M729 Mvb12a-201ENSMUST00000034272 1062 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Scn4bQ7M729 Cep135-202ENSMUST00000121979 5537 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
Scn4bQ7M729 Tm9sf2-203ENSMUST00000171318 1494 ntTSL 5 BASIC16.46■□□□□ 0.23
Scn4bQ7M729 Tox2-205ENSMUST00000165937 1675 ntAPPRIS P2 TSL 5 BASIC16.46■□□□□ 0.23
Scn4bQ7M729 Eda-203ENSMUST00000113776 5105 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Scn4bQ7M729 Sox4-201ENSMUST00000067230 4795 ntAPPRIS P1 BASIC16.46■□□□□ 0.22
Scn4bQ7M729 Itgb4-205ENSMUST00000106461 6208 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.22
Scn4bQ7M729 Nudt16-201ENSMUST00000035179 1631 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Scn4bQ7M729 Tnfrsf13c-201ENSMUST00000089161 1906 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Scn4bQ7M729 Ldb1-205ENSMUST00000137771 2014 ntTSL 5 BASIC16.45■□□□□ 0.22
Scn4bQ7M729 Crebzf-201ENSMUST00000061767 3376 ntAPPRIS P1 BASIC16.45■□□□□ 0.22
Scn4bQ7M729 Sytl3-201ENSMUST00000097430 2100 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Scn4bQ7M729 Rhof-201ENSMUST00000031401 2208 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Scn4bQ7M729 Zrsr2-202ENSMUST00000112289 2735 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
Scn4bQ7M729 Mthfsl-201ENSMUST00000113110 801 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Scn4bQ7M729 Mthfs-203ENSMUST00000118870 705 ntTSL 3 BASIC16.45■□□□□ 0.22
Scn4bQ7M729 Ndufa12-201ENSMUST00000020209 1110 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Scn4bQ7M729 Ube2a-208ENSMUST00000202812 719 ntTSL 2 BASIC16.45■□□□□ 0.22
Scn4bQ7M729 AC124601.2-201ENSMUST00000222888 759 ntTSL 2 BASIC16.45■□□□□ 0.22
Scn4bQ7M729 Tollip-202ENSMUST00000055819 1100 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Scn4bQ7M729 Mthfs-201ENSMUST00000085256 816 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Scn4bQ7M729 Pkn1-201ENSMUST00000005616 6662 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
Scn4bQ7M729 Plac9a-201ENSMUST00000052286 1555 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Scn4bQ7M729 Itpkb-201ENSMUST00000070181 6235 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Scn4bQ7M729 Stk33-201ENSMUST00000090414 2221 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
Scn4bQ7M729 Npas3-201ENSMUST00000101432 5879 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Scn4bQ7M729 Kdelr2-201ENSMUST00000110731 1829 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Scn4bQ7M729 Hdhd2-202ENSMUST00000097521 1716 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Scn4bQ7M729 F830208F22Rik-202ENSMUST00000143732 2891 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Scn4bQ7M729 Ccdc106-204ENSMUST00000207974 2492 ntTSL 2 BASIC16.44■□□□□ 0.22
Scn4bQ7M729 Jmy-201ENSMUST00000065537 8776 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Scn4bQ7M729 E230001N04Rik-202ENSMUST00000181029 2091 ntBASIC16.44■□□□□ 0.22
Scn4bQ7M729 Sgta-201ENSMUST00000005067 1969 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Scn4bQ7M729 Ccdc166-202ENSMUST00000183130 1563 ntAPPRIS P1 TSL 2 BASIC16.44■□□□□ 0.22
Scn4bQ7M729 Tm9sf1-205ENSMUST00000122358 2517 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Scn4bQ7M729 Gm2431-201ENSMUST00000171531 519 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
Scn4bQ7M729 Gm16998-201ENSMUST00000181899 1230 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Scn4bQ7M729 Gm28876-201ENSMUST00000188137 703 ntTSL 3 BASIC16.44■□□□□ 0.22
Scn4bQ7M729 Anapc13-203ENSMUST00000188398 727 ntAPPRIS P1 TSL 2 BASIC16.44■□□□□ 0.22
Scn4bQ7M729 Cacna2d1-207ENSMUST00000196750 1272 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Scn4bQ7M729 6530437J22Rik-201ENSMUST00000207515 773 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Scn4bQ7M729 Fitm1-201ENSMUST00000022826 971 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Scn4bQ7M729 Lsm10-201ENSMUST00000055575 943 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Scn4bQ7M729 Gm8994-201ENSMUST00000077886 1236 ntAPPRIS P1 BASIC16.44■□□□□ 0.22
Scn4bQ7M729 Ryr2-203ENSMUST00000220597 4924 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Scn4bQ7M729 Ankrd17-203ENSMUST00000168058 9311 ntAPPRIS ALT2 TSL 5 BASIC16.44■□□□□ 0.22
Scn4bQ7M729 Gm26526-201ENSMUST00000181075 2927 ntTSL 5 BASIC16.44■□□□□ 0.22
Scn4bQ7M729 Rcc1-201ENSMUST00000030726 2278 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Scn4bQ7M729 Tnfrsf25-202ENSMUST00000035275 1603 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
Scn4bQ7M729 Sar1a-201ENSMUST00000020285 2613 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Scn4bQ7M729 Ino80e-203ENSMUST00000106343 1973 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Scn4bQ7M729 Synpo-205ENSMUST00000130044 4970 ntAPPRIS P3 TSL 2 BASIC16.44■□□□□ 0.22
Scn4bQ7M729 Mtif3-201ENSMUST00000016654 2131 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Scn4bQ7M729 C130026I21Rik-201ENSMUST00000064341 1561 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
Scn4bQ7M729 Nr1h2-204ENSMUST00000107912 1839 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
Scn4bQ7M729 Irgc1-204ENSMUST00000205776 1835 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Scn4bQ7M729 Plppr2-203ENSMUST00000190387 2608 ntAPPRIS P2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Scn4bQ7M729 Dhx32-201ENSMUST00000033290 2955 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Scn4bQ7M729 Tekt1-203ENSMUST00000108503 1397 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Scn4bQ7M729 9330151L19Rik-201ENSMUST00000181850 2545 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Scn4bQ7M729 Lhx6-203ENSMUST00000112963 3481 ntTSL 2 BASIC16.43■□□□□ 0.22
Scn4bQ7M729 Gm27000-201ENSMUST00000182943 842 ntBASIC16.43■□□□□ 0.22
Scn4bQ7M729 Gm21814-202ENSMUST00000203277 873 ntBASIC16.43■□□□□ 0.22
Scn4bQ7M729 Gm10252-201ENSMUST00000209541 832 ntBASIC16.43■□□□□ 0.22
Scn4bQ7M729 Tmem205-201ENSMUST00000046831 785 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Scn4bQ7M729 Gm16861-201ENSMUST00000181498 1647 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Scn4bQ7M729 Ctsf-201ENSMUST00000119694 1975 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Scn4bQ7M729 Hoxd4-201ENSMUST00000047904 2560 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
Scn4bQ7M729 Dph1-201ENSMUST00000044949 2139 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Scn4bQ7M729 Asic2-201ENSMUST00000021045 3436 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Scn4bQ7M729 Tmprss5-201ENSMUST00000070390 2047 ntAPPRIS P2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Scn4bQ7M729 Rbmxl1-201ENSMUST00000049245 1695 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Scn4bQ7M729 AL590614.2-201ENSMUST00000225374 1937 ntBASIC16.43■□□□□ 0.22
Scn4bQ7M729 Arhgap39-202ENSMUST00000077821 4494 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
Scn4bQ7M729 Pid1-201ENSMUST00000168574 2664 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Scn4bQ7M729 Gm45774-201ENSMUST00000211992 2665 ntBASIC16.42■□□□□ 0.22
Scn4bQ7M729 Qprt-201ENSMUST00000032912 2050 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Scn4bQ7M729 Ripor2-202ENSMUST00000058009 2550 ntAPPRIS ALT2 TSL 2 BASIC16.42■□□□□ 0.22
Scn4bQ7M729 Opa3-202ENSMUST00000161711 1390 ntAPPRIS ALT2 TSL 2 BASIC16.42■□□□□ 0.22
Scn4bQ7M729 Gnb1-203ENSMUST00000165335 3143 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Scn4bQ7M729 Men1-205ENSMUST00000113501 2508 ntTSL 5 BASIC16.42■□□□□ 0.22
Scn4bQ7M729 Dnlz-201ENSMUST00000028295 2916 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Scn4bQ7M729 Steap1-201ENSMUST00000015796 1230 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Scn4bQ7M729 AL672049.1-201ENSMUST00000197943 91 ntBASIC16.42■□□□□ 0.22
Scn4bQ7M729 4930554C24Rik-202ENSMUST00000216019 1159 ntTSL 5 BASIC16.42■□□□□ 0.22
Scn4bQ7M729 Espn-202ENSMUST00000049305 1142 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Scn4bQ7M729 Nme2-202ENSMUST00000072566 734 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Retrieved 100 of 76,532 protein–RNA pairs in 23.9 ms