Protein–RNA interactions for Protein: Q78T54

Vma21, Vacuolar ATPase assembly integral membrane protein Vma21, mousemouse

Predictions only

Length 101 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vma21Q78T54 Spopl-203ENSMUST00000132484 6595 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
Vma21Q78T54 Cnksr1-201ENSMUST00000030645 2468 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Vma21Q78T54 Mmd-202ENSMUST00000107887 1654 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Vma21Q78T54 Lamc1-201ENSMUST00000027752 7622 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Vma21Q78T54 Tspan2-203ENSMUST00000196611 682 ntTSL 5 BASIC13.8□□□□□ -0.2
Vma21Q78T54 Gpr20-201ENSMUST00000064166 2144 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Vma21Q78T54 Aldh2-202ENSMUST00000129753 1799 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Vma21Q78T54 Lzts2-203ENSMUST00000179108 2781 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Vma21Q78T54 Plppr5-201ENSMUST00000039564 4670 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Vma21Q78T54 Snx25-203ENSMUST00000110378 3445 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
Vma21Q78T54 2810408A11Rik-201ENSMUST00000018714 1485 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Vma21Q78T54 Mtfr1l-202ENSMUST00000116279 1969 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Vma21Q78T54 Ppp1r36-201ENSMUST00000063977 1515 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
Vma21Q78T54 Lpgat1-201ENSMUST00000110855 7233 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Vma21Q78T54 Pkn2-201ENSMUST00000043812 6207 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Vma21Q78T54 Mrpl9-201ENSMUST00000029786 1612 ntAPPRIS P2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Vma21Q78T54 Clasrp-201ENSMUST00000086041 2180 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Vma21Q78T54 Ankrd44-201ENSMUST00000044359 6192 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
Vma21Q78T54 Gtpbp3-208ENSMUST00000168847 2803 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
Vma21Q78T54 Coq8b-202ENSMUST00000108378 2276 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Vma21Q78T54 Dnajc25-201ENSMUST00000095070 4023 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Vma21Q78T54 Stk39-201ENSMUST00000102715 3536 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Vma21Q78T54 Chmp2b-201ENSMUST00000004965 1838 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Vma21Q78T54 Sars2-201ENSMUST00000094632 1868 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Vma21Q78T54 Slit1-203ENSMUST00000169141 5673 ntTSL 5 BASIC13.79□□□□□ -0.2
Vma21Q78T54 Gm8773-201ENSMUST00000101627 1268 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Vma21Q78T54 Prcd-201ENSMUST00000106381 724 ntTSL 3 BASIC13.79□□□□□ -0.2
Vma21Q78T54 Speg-204ENSMUST00000113589 833 ntTSL 2 BASIC13.79□□□□□ -0.2
Vma21Q78T54 Gm11249-201ENSMUST00000117071 859 ntBASIC13.79□□□□□ -0.2
Vma21Q78T54 Gm3764-202ENSMUST00000180582 440 ntTSL 5 BASIC13.79□□□□□ -0.2
Vma21Q78T54 Dap-205ENSMUST00000186547 535 ntTSL 3 BASIC13.79□□□□□ -0.2
Vma21Q78T54 Tmem192-201ENSMUST00000026595 1122 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Vma21Q78T54 1700018M17Rik-201ENSMUST00000052502 456 ntBASIC13.79□□□□□ -0.2
Vma21Q78T54 Zfp668-201ENSMUST00000054415 5768 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Vma21Q78T54 Gm26795-201ENSMUST00000180993 1952 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Vma21Q78T54 Zkscan14-201ENSMUST00000031632 1967 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Vma21Q78T54 Smim3-201ENSMUST00000042710 1984 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Vma21Q78T54 Serac1-201ENSMUST00000024570 2033 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
Vma21Q78T54 Lrrc73-201ENSMUST00000095262 1384 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Vma21Q78T54 Akap8l-201ENSMUST00000050214 2075 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Vma21Q78T54 Zfp281-202ENSMUST00000112046 4937 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Vma21Q78T54 Mipep-201ENSMUST00000063562 3015 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Vma21Q78T54 4930432B10Rik-202ENSMUST00000181330 1612 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Vma21Q78T54 Cnot9-201ENSMUST00000087215 3268 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Vma21Q78T54 Lrrtm1-202ENSMUST00000159616 2541 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Vma21Q78T54 Chka-202ENSMUST00000072055 2549 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
Vma21Q78T54 Pcdha3-201ENSMUST00000192503 5332 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Vma21Q78T54 Eefsec-201ENSMUST00000165242 2679 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Vma21Q78T54 Dlg5-202ENSMUST00000073687 7784 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Vma21Q78T54 Adnp-201ENSMUST00000057793 4917 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
Vma21Q78T54 Ints8-202ENSMUST00000108318 3169 ntTSL 5 BASIC13.78□□□□□ -0.2
Vma21Q78T54 Acap3-201ENSMUST00000079031 4301 ntTSL 5 BASIC13.78□□□□□ -0.2
Vma21Q78T54 Vps53-203ENSMUST00000108419 2209 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Vma21Q78T54 Dvl3-204ENSMUST00000171774 2319 ntTSL 5 BASIC13.78□□□□□ -0.2
Vma21Q78T54 Zhx1-201ENSMUST00000070143 4764 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Vma21Q78T54 BC030336-201ENSMUST00000060175 4831 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Vma21Q78T54 Gm13216-201ENSMUST00000117145 591 ntBASIC13.78□□□□□ -0.2
Vma21Q78T54 2610035F20Rik-202ENSMUST00000177306 1149 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Vma21Q78T54 Smim10l1-204ENSMUST00000191462 574 ntTSL 3 BASIC13.78□□□□□ -0.2
Vma21Q78T54 AC166341.7-201ENSMUST00000221698 126 ntBASIC13.78□□□□□ -0.2
Vma21Q78T54 Flywch2-201ENSMUST00000024704 694 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Vma21Q78T54 Rps16-201ENSMUST00000082134 1109 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Vma21Q78T54 Adam33-201ENSMUST00000052104 2795 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Vma21Q78T54 Usp43-202ENSMUST00000108677 4447 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Vma21Q78T54 Eda-209ENSMUST00000113783 4930 ntTSL 5 BASIC13.78□□□□□ -0.2
Vma21Q78T54 Tra2a-204ENSMUST00000204189 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Vma21Q78T54 Tfap2a-209ENSMUST00000225180 1828 ntBASIC13.78□□□□□ -0.2
Vma21Q78T54 Ctsf-201ENSMUST00000119694 1975 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Vma21Q78T54 Il17re-208ENSMUST00000204774 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Vma21Q78T54 Nmnat3-201ENSMUST00000112935 2166 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Vma21Q78T54 Pigl-201ENSMUST00000014389 2174 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Vma21Q78T54 Mbp-201ENSMUST00000047865 2492 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Vma21Q78T54 Gm16835-201ENSMUST00000140488 2809 ntTSL 1 (best) BASIC13.77□□□□□ -0.2
Vma21Q78T54 Heyl-201ENSMUST00000040821 4537 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
Vma21Q78T54 Sacs-204ENSMUST00000121091 4581 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.2
Vma21Q78T54 Zmym3-201ENSMUST00000063577 6057 ntAPPRIS P2 TSL 1 (best) BASIC13.77□□□□□ -0.2
Vma21Q78T54 Fez2-202ENSMUST00000112487 2020 ntAPPRIS ALT1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Vma21Q78T54 Bex3-202ENSMUST00000113112 826 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Vma21Q78T54 Gm12382-201ENSMUST00000122005 922 ntBASIC13.77□□□□□ -0.21
Vma21Q78T54 9530080O11Rik-201ENSMUST00000137239 1475 ntTSL 2 BASIC13.77□□□□□ -0.21
Vma21Q78T54 Gm11769-201ENSMUST00000140273 1657 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Vma21Q78T54 Ccdc58-202ENSMUST00000163352 970 ntTSL 3 BASIC13.77□□□□□ -0.21
Vma21Q78T54 Ccdc58-203ENSMUST00000164916 1096 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Vma21Q78T54 Fam181a-201ENSMUST00000179363 1406 ntAPPRIS P1 TSL 2 BASIC13.77□□□□□ -0.21
Vma21Q78T54 2310002F09Rik-201ENSMUST00000181454 1607 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Vma21Q78T54 9330151L19Rik-201ENSMUST00000181850 2545 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Vma21Q78T54 Aqp2-201ENSMUST00000023752 1416 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Vma21Q78T54 Cdk2ap2-201ENSMUST00000025779 1080 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Vma21Q78T54 Ccnl1-201ENSMUST00000029416 2169 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Vma21Q78T54 Adamts19-201ENSMUST00000052907 4666 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Vma21Q78T54 Slco3a1-201ENSMUST00000026897 4589 ntAPPRIS P4 TSL 1 (best) BASIC13.77□□□□□ -0.21
Vma21Q78T54 Exoc8-201ENSMUST00000098312 4598 ntAPPRIS P1 BASIC13.77□□□□□ -0.21
Vma21Q78T54 Eml5-210ENSMUST00000223282 7595 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.21
Vma21Q78T54 Rbm12b1-202ENSMUST00000069128 3069 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Vma21Q78T54 Arntl-204ENSMUST00000210238 2976 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.21
Vma21Q78T54 Pigt-201ENSMUST00000103101 2562 ntAPPRIS P2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Vma21Q78T54 Ccdc184-201ENSMUST00000031914 2329 ntAPPRIS P1 BASIC13.76□□□□□ -0.21
Vma21Q78T54 Anks1-201ENSMUST00000025058 6844 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Vma21Q78T54 Relb-201ENSMUST00000049912 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Vma21Q78T54 H2-D1-202ENSMUST00000172785 2102 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Retrieved 100 of 76,532 protein–RNA pairs in 67.7 ms