Protein–RNA interactions for Protein: Q640N4

Zfp248, Zinc finger protein 248, mousemouse

Predictions only

Length 576 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Zfp248Q640N4 Trp73-203ENSMUST00000105643 1916 ntAPPRIS ALT2 TSL 5 BASIC12.89□□□□□ -0.35
Zfp248Q640N4 Slmap-203ENSMUST00000102956 5476 ntAPPRIS P3 TSL 5 BASIC12.89□□□□□ -0.35
Zfp248Q640N4 Ubr2-201ENSMUST00000113335 5691 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Zfp248Q640N4 Krt6a-201ENSMUST00000023788 2256 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Zfp248Q640N4 Rbpms-201ENSMUST00000033994 2375 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Zfp248Q640N4 Zfp865-203ENSMUST00000085427 2751 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Zfp248Q640N4 Gm11620-201ENSMUST00000118770 1845 ntBASIC12.88□□□□□ -0.35
Zfp248Q640N4 Tfap2a-209ENSMUST00000225180 1828 ntBASIC12.88□□□□□ -0.35
Zfp248Q640N4 Antxr2-201ENSMUST00000031281 5656 ntAPPRIS P2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Zfp248Q640N4 Lin9-203ENSMUST00000192561 3160 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Zfp248Q640N4 Speg-203ENSMUST00000113588 1078 ntTSL 5 BASIC12.88□□□□□ -0.35
Zfp248Q640N4 Gm12527-201ENSMUST00000117967 564 ntBASIC12.88□□□□□ -0.35
Zfp248Q640N4 Mrpl13-205ENSMUST00000172387 1223 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Zfp248Q640N4 E030044B06Rik-201ENSMUST00000181195 1266 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Zfp248Q640N4 6230400D17Rik-202ENSMUST00000224976 1019 ntBASIC12.88□□□□□ -0.35
Zfp248Q640N4 Gm10638-201ENSMUST00000098532 905 ntAPPRIS P1 BASIC12.88□□□□□ -0.35
Zfp248Q640N4 Cpsf4-207ENSMUST00000162244 1387 ntAPPRIS P4 TSL 1 (best) BASIC12.88□□□□□ -0.35
Zfp248Q640N4 Endov-203ENSMUST00000106245 5126 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Zfp248Q640N4 Efr3a-201ENSMUST00000015146 5215 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Zfp248Q640N4 Vrk2-201ENSMUST00000078362 1889 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Zfp248Q640N4 Mmd-201ENSMUST00000004050 2677 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Zfp248Q640N4 Rala-201ENSMUST00000009003 2688 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Zfp248Q640N4 Cdc14b-203ENSMUST00000109770 3052 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
Zfp248Q640N4 Bard1-201ENSMUST00000027393 5659 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Zfp248Q640N4 Vgll3-201ENSMUST00000168064 7009 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Zfp248Q640N4 Zbtb22-201ENSMUST00000053429 2611 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Zfp248Q640N4 Dok7-202ENSMUST00000101298 2443 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Zfp248Q640N4 Il17re-208ENSMUST00000204774 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Zfp248Q640N4 Ldb1-205ENSMUST00000137771 2014 ntTSL 5 BASIC12.88□□□□□ -0.35
Zfp248Q640N4 Mapk9-205ENSMUST00000109179 4682 ntTSL 5 BASIC12.88□□□□□ -0.35
Zfp248Q640N4 Mapk9-209ENSMUST00000164643 4682 ntTSL 5 BASIC12.88□□□□□ -0.35
Zfp248Q640N4 Tedc2-201ENSMUST00000024930 2166 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Zfp248Q640N4 Naa50-204ENSMUST00000161326 4487 ntAPPRIS ALT1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Zfp248Q640N4 Gm27029-201ENSMUST00000107257 1898 ntAPPRIS ALT2 TSL 5 BASIC12.87□□□□□ -0.35
Zfp248Q640N4 Gart-202ENSMUST00000120450 1865 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Zfp248Q640N4 Siglecf-202ENSMUST00000121494 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Zfp248Q640N4 Lhx6-208ENSMUST00000148852 1481 ntTSL 5 BASIC12.87□□□□□ -0.35
Zfp248Q640N4 A930001A20Rik-201ENSMUST00000182586 1366 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Zfp248Q640N4 AC124581.1-201ENSMUST00000225416 1399 ntBASIC12.87□□□□□ -0.35
Zfp248Q640N4 Rftn1-201ENSMUST00000044503 4029 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Zfp248Q640N4 Tm4sf19-201ENSMUST00000115149 1257 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Zfp248Q640N4 Gm13816-201ENSMUST00000152230 715 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Zfp248Q640N4 Gm24841-201ENSMUST00000158676 357 ntBASIC12.87□□□□□ -0.35
Zfp248Q640N4 2310002F09Rik-201ENSMUST00000181454 1607 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Zfp248Q640N4 Zic1-202ENSMUST00000065360 2811 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Zfp248Q640N4 Tfdp2-206ENSMUST00000185644 2646 ntAPPRIS P3 TSL 1 (best) BASIC12.87□□□□□ -0.35
Zfp248Q640N4 Nr1h2-201ENSMUST00000073488 1999 ntAPPRIS P3 TSL 1 (best) BASIC12.87□□□□□ -0.35
Zfp248Q640N4 Gpr180-201ENSMUST00000022728 1875 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Zfp248Q640N4 Asph-204ENSMUST00000084915 2884 ntTSL 5 BASIC12.87□□□□□ -0.35
Zfp248Q640N4 Erlin1-201ENSMUST00000071698 3228 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
Zfp248Q640N4 Ralgapa1-201ENSMUST00000085385 7901 ntAPPRIS P2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Zfp248Q640N4 Fbxo7-203ENSMUST00000120344 1655 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Zfp248Q640N4 Hr-201ENSMUST00000022691 5487 ntAPPRIS P2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Zfp248Q640N4 Car9-201ENSMUST00000030183 2023 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Zfp248Q640N4 Mbp-201ENSMUST00000047865 2492 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Zfp248Q640N4 Gm45623-201ENSMUST00000210744 1457 ntAPPRIS P1 BASIC12.86□□□□□ -0.35
Zfp248Q640N4 Klhl5-204ENSMUST00000204097 3149 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Zfp248Q640N4 Acbd3-201ENSMUST00000027780 3471 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Zfp248Q640N4 Gm15378-201ENSMUST00000121894 207 ntBASIC12.86□□□□□ -0.35
Zfp248Q640N4 Arl6ip4-202ENSMUST00000122394 982 ntAPPRIS ALT2 TSL 5 BASIC12.86□□□□□ -0.35
Zfp248Q640N4 Nudt22-203ENSMUST00000180765 1073 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
Zfp248Q640N4 Uqcr11-201ENSMUST00000020372 445 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Zfp248Q640N4 Rabac1-203ENSMUST00000205871 986 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Zfp248Q640N4 Evpl-201ENSMUST00000037007 6384 ntAPPRIS P1 TSL 2 BASIC12.86□□□□□ -0.35
Zfp248Q640N4 CT010444.2-201ENSMUST00000217877 1629 ntBASIC12.86□□□□□ -0.35
Zfp248Q640N4 Dvl3-204ENSMUST00000171774 2319 ntTSL 5 BASIC12.86□□□□□ -0.35
Zfp248Q640N4 Acads-201ENSMUST00000031524 1870 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Zfp248Q640N4 Dnajc19-201ENSMUST00000011029 2499 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Zfp248Q640N4 Lrch4-201ENSMUST00000031734 3078 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
Zfp248Q640N4 Zmym3-201ENSMUST00000063577 6057 ntAPPRIS P2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Zfp248Q640N4 Praf2-201ENSMUST00000033489 1339 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Zfp248Q640N4 Nkpd1-201ENSMUST00000078908 2753 ntAPPRIS P2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Zfp248Q640N4 Lzts2-201ENSMUST00000039016 2825 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Zfp248Q640N4 Rhof-201ENSMUST00000031401 2208 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Zfp248Q640N4 Cnksr1-201ENSMUST00000030645 2468 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Zfp248Q640N4 Rab6a-201ENSMUST00000032946 3214 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
Zfp248Q640N4 Flt1-202ENSMUST00000031653 6895 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Zfp248Q640N4 Taf6l-201ENSMUST00000003777 1869 ntTSL 5 BASIC12.85□□□□□ -0.35
Zfp248Q640N4 Arfip2-202ENSMUST00000084782 2254 ntAPPRIS P2 TSL 5 BASIC12.85□□□□□ -0.35
Zfp248Q640N4 Acaa1a-201ENSMUST00000039784 1762 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Zfp248Q640N4 Cpox-201ENSMUST00000060077 3186 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Zfp248Q640N4 Gm5643-201ENSMUST00000117081 966 ntBASIC12.85□□□□□ -0.35
Zfp248Q640N4 2310001K24Rik-202ENSMUST00000186760 740 ntTSL 2 BASIC12.85□□□□□ -0.35
Zfp248Q640N4 Rpl18-202ENSMUST00000209287 1027 ntTSL 3 BASIC12.85□□□□□ -0.35
Zfp248Q640N4 Gm45894-201ENSMUST00000211940 651 ntTSL 2 BASIC12.85□□□□□ -0.35
Zfp248Q640N4 1810041L15Rik-203ENSMUST00000189248 5296 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Zfp248Q640N4 Tmem175-204ENSMUST00000146207 1686 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Zfp248Q640N4 Nfkbib-201ENSMUST00000032815 2061 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Zfp248Q640N4 Itgb4-201ENSMUST00000021107 6014 ntAPPRIS P2 TSL 5 BASIC12.85□□□□□ -0.35
Zfp248Q640N4 Gm11841-201ENSMUST00000117060 1963 ntBASIC12.85□□□□□ -0.35
Zfp248Q640N4 Ints8-201ENSMUST00000044616 3433 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Zfp248Q640N4 Rnf128-201ENSMUST00000113026 2750 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Zfp248Q640N4 Sec61a1-201ENSMUST00000032168 3172 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Zfp248Q640N4 Lbp-202ENSMUST00000109491 1322 ntTSL 2 BASIC12.85□□□□□ -0.35
Zfp248Q640N4 Polr3e-203ENSMUST00000207481 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Zfp248Q640N4 Sgsm1-204ENSMUST00000112325 2274 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Zfp248Q640N4 Yipf2-204ENSMUST00000213809 1883 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Zfp248Q640N4 Appbp2-201ENSMUST00000018625 6463 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Zfp248Q640N4 Ccdc17-201ENSMUST00000051869 2003 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Zfp248Q640N4 Plcl2-201ENSMUST00000043938 4050 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 38.6 ms