Protein–RNA interactions for Protein: Q5R1I8

Trav3-1, T cell receptor alpha variable 3-1 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav3-1Q5R1I8 Tle3-201ENSMUST00000034820 4646 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Trav3-1Q5R1I8 Cdk5r1-201ENSMUST00000053413 4162 ntAPPRIS P1 BASIC11.53□□□□□ -0.56
Trav3-1Q5R1I8 Vwa8-202ENSMUST00000227255 3406 ntAPPRIS ALT2 BASIC11.53□□□□□ -0.56
Trav3-1Q5R1I8 Sec61a1-201ENSMUST00000032168 3172 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trav3-1Q5R1I8 Thumpd1-201ENSMUST00000033236 2689 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trav3-1Q5R1I8 Gypc-203ENSMUST00000174459 2180 ntAPPRIS P3 TSL 1 (best) BASIC11.52□□□□□ -0.56
Trav3-1Q5R1I8 Ptprv-210ENSMUST00000183317 6108 ntTSL 1 (best) BASIC11.52□□□□□ -0.56
Trav3-1Q5R1I8 Stx7-201ENSMUST00000020174 2502 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Trav3-1Q5R1I8 Ddx19a-201ENSMUST00000040416 2547 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Trav3-1Q5R1I8 Gpat3-203ENSMUST00000112887 3059 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Trav3-1Q5R1I8 Prmt6-203ENSMUST00000190378 3051 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Trav3-1Q5R1I8 Tha1-201ENSMUST00000033230 1770 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Trav3-1Q5R1I8 Saysd1-201ENSMUST00000059666 2315 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Trav3-1Q5R1I8 Txnrd2-215ENSMUST00000206151 2874 ntAPPRIS P2 TSL 5 BASIC11.52□□□□□ -0.57
Trav3-1Q5R1I8 Cbfa2t3-202ENSMUST00000064674 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.57
Trav3-1Q5R1I8 Pitpna-206ENSMUST00000179521 3727 ntAPPRIS ALT1 TSL 5 BASIC11.52□□□□□ -0.57
Trav3-1Q5R1I8 Camkk2-201ENSMUST00000111668 4861 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.57
Trav3-1Q5R1I8 Anks1b-204ENSMUST00000179337 2692 ntTSL 5 BASIC11.52□□□□□ -0.57
Trav3-1Q5R1I8 Insig1-201ENSMUST00000059155 2697 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Trav3-1Q5R1I8 Iscu-203ENSMUST00000112312 1116 ntTSL 5 BASIC11.52□□□□□ -0.57
Trav3-1Q5R1I8 Gm31266-201ENSMUST00000192060 656 ntTSL 5 BASIC11.52□□□□□ -0.57
Trav3-1Q5R1I8 Id4-201ENSMUST00000021810 3849 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Trav3-1Q5R1I8 D130020L05Rik-203ENSMUST00000221044 803 ntTSL 2 BASIC11.52□□□□□ -0.57
Trav3-1Q5R1I8 Rfc5-201ENSMUST00000086461 2796 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Trav3-1Q5R1I8 Phldb1-214ENSMUST00000147495 5424 ntAPPRIS P5 TSL 5 BASIC11.52□□□□□ -0.57
Trav3-1Q5R1I8 Arid3a-202ENSMUST00000105376 4892 ntAPPRIS P3 TSL 1 (best) BASIC11.52□□□□□ -0.57
Trav3-1Q5R1I8 Slc35f4-201ENSMUST00000074368 1931 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Trav3-1Q5R1I8 Gm572-201ENSMUST00000105698 1385 ntAPPRIS P1 TSL 5 BASIC11.52□□□□□ -0.57
Trav3-1Q5R1I8 Qdpr-201ENSMUST00000015950 1380 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Trav3-1Q5R1I8 Gm16279-201ENSMUST00000149452 2945 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Trav3-1Q5R1I8 Reep6-207ENSMUST00000186864 2015 ntAPPRIS P3 TSL 1 (best) BASIC11.52□□□□□ -0.57
Trav3-1Q5R1I8 Eml3-202ENSMUST00000224272 2978 ntAPPRIS ALT2 BASIC11.52□□□□□ -0.57
Trav3-1Q5R1I8 Tpm1-212ENSMUST00000113696 1714 ntTSL 2 BASIC11.52□□□□□ -0.57
Trav3-1Q5R1I8 Kcnh4-202ENSMUST00000107363 3948 ntAPPRIS P1 TSL 5 BASIC11.52□□□□□ -0.57
Trav3-1Q5R1I8 Mmd-201ENSMUST00000004050 2677 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Trav3-1Q5R1I8 Rims1-209ENSMUST00000218140 1434 ntTSL 5 BASIC11.52□□□□□ -0.57
Trav3-1Q5R1I8 Nxnl1-202ENSMUST00000163659 2730 ntAPPRIS P1 TSL 2 BASIC11.51□□□□□ -0.57
Trav3-1Q5R1I8 Tead4-201ENSMUST00000006311 3076 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Trav3-1Q5R1I8 Hcfc2-201ENSMUST00000020478 3422 ntAPPRIS P1 TSL 5 BASIC11.51□□□□□ -0.57
Trav3-1Q5R1I8 Itm2c-203ENSMUST00000185569 1465 ntTSL 5 BASIC11.51□□□□□ -0.57
Trav3-1Q5R1I8 Hpca-204ENSMUST00000116444 1847 ntAPPRIS P1 TSL 5 BASIC11.51□□□□□ -0.57
Trav3-1Q5R1I8 Pdx1-201ENSMUST00000085591 2158 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trav3-1Q5R1I8 Arhgef25-212ENSMUST00000222006 1896 ntTSL 5 BASIC11.51□□□□□ -0.57
Trav3-1Q5R1I8 Dpf1-203ENSMUST00000108230 1553 ntTSL 5 BASIC11.51□□□□□ -0.57
Trav3-1Q5R1I8 Csad-201ENSMUST00000023805 2265 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trav3-1Q5R1I8 Gm9888-201ENSMUST00000150678 965 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Trav3-1Q5R1I8 Kazn-201ENSMUST00000036476 3843 ntAPPRIS P2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trav3-1Q5R1I8 Lbx2-201ENSMUST00000041265 817 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trav3-1Q5R1I8 Senp6-202ENSMUST00000164859 3853 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trav3-1Q5R1I8 6820408C15Rik-201ENSMUST00000039961 1684 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trav3-1Q5R1I8 Acd-201ENSMUST00000042608 3154 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trav3-1Q5R1I8 Asph-210ENSMUST00000108337 2836 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Trav3-1Q5R1I8 Mis18bp1-208ENSMUST00000222244 2053 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Trav3-1Q5R1I8 Trim3-203ENSMUST00000106791 2466 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Trav3-1Q5R1I8 Gpr6-201ENSMUST00000061796 1786 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trav3-1Q5R1I8 Syt17-204ENSMUST00000203796 2957 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trav3-1Q5R1I8 Arrb2-204ENSMUST00000102564 1848 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trav3-1Q5R1I8 Itgb7-201ENSMUST00000001327 2674 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trav3-1Q5R1I8 Patz1-201ENSMUST00000057089 3118 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Trav3-1Q5R1I8 Zc3h13-201ENSMUST00000022577 6151 ntAPPRIS P2 TSL 5 BASIC11.5□□□□□ -0.57
Trav3-1Q5R1I8 G630022F23Rik-201ENSMUST00000202923 3627 ntBASIC11.5□□□□□ -0.57
Trav3-1Q5R1I8 Rspry1-207ENSMUST00000212729 2800 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Trav3-1Q5R1I8 Kdm5c-202ENSMUST00000112584 5900 ntAPPRIS ALT2 TSL 5 BASIC11.5□□□□□ -0.57
Trav3-1Q5R1I8 Rubie-203ENSMUST00000227803 2430 ntBASIC11.5□□□□□ -0.57
Trav3-1Q5R1I8 Plch2-201ENSMUST00000105631 5053 ntAPPRIS ALT2 TSL 5 BASIC11.5□□□□□ -0.57
Trav3-1Q5R1I8 Usp38-201ENSMUST00000042724 4707 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trav3-1Q5R1I8 Lefty2-201ENSMUST00000085797 2473 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trav3-1Q5R1I8 Yipf3-201ENSMUST00000095263 2035 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trav3-1Q5R1I8 Sema3b-204ENSMUST00000102531 2958 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trav3-1Q5R1I8 Tmem30b-201ENSMUST00000042975 2991 ntAPPRIS P1 BASIC11.5□□□□□ -0.57
Trav3-1Q5R1I8 Mbp-203ENSMUST00000075372 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trav3-1Q5R1I8 Papd7-201ENSMUST00000044081 3994 ntAPPRIS P2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trav3-1Q5R1I8 Vim-201ENSMUST00000028062 2193 ntAPPRIS P2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trav3-1Q5R1I8 Mydgf-201ENSMUST00000019723 1710 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trav3-1Q5R1I8 Tpst2-202ENSMUST00000071455 1741 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trav3-1Q5R1I8 Rnf128-201ENSMUST00000113026 2750 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trav3-1Q5R1I8 Hs3st2-201ENSMUST00000084628 2278 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trav3-1Q5R1I8 Stxbp3-205ENSMUST00000138552 1789 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Trav3-1Q5R1I8 AC122901.1-201ENSMUST00000214203 1790 ntBASIC11.5□□□□□ -0.57
Trav3-1Q5R1I8 Gm28513-201ENSMUST00000191474 613 ntTSL 3 BASIC11.5□□□□□ -0.57
Trav3-1Q5R1I8 Gm42809-201ENSMUST00000198429 1138 ntBASIC11.5□□□□□ -0.57
Trav3-1Q5R1I8 Bcl7c-207ENSMUST00000207019 654 ntTSL 3 BASIC11.5□□□□□ -0.57
Trav3-1Q5R1I8 Gm43399-201ENSMUST00000202546 2374 ntBASIC11.5□□□□□ -0.57
Trav3-1Q5R1I8 Rspo4-201ENSMUST00000042217 2371 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trav3-1Q5R1I8 Capn10-201ENSMUST00000027488 2902 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trav3-1Q5R1I8 Map3k3-201ENSMUST00000002044 3450 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trav3-1Q5R1I8 Sars2-201ENSMUST00000094632 1868 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trav3-1Q5R1I8 Mbd6-201ENSMUST00000026476 4165 ntAPPRIS P3 TSL 5 BASIC11.5□□□□□ -0.57
Trav3-1Q5R1I8 Gm2788-204ENSMUST00000209288 1966 ntTSL 5 BASIC11.5□□□□□ -0.57
Trav3-1Q5R1I8 Mgarp-202ENSMUST00000108046 1409 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Trav3-1Q5R1I8 Cep170-205ENSMUST00000192961 2708 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Trav3-1Q5R1I8 Plch2-207ENSMUST00000139976 5322 ntAPPRIS P3 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trav3-1Q5R1I8 Tmem120a-201ENSMUST00000043378 1559 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trav3-1Q5R1I8 Sh2d4b-202ENSMUST00000096000 1597 ntAPPRIS P2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trav3-1Q5R1I8 Gm18336-201ENSMUST00000180787 2298 ntAPPRIS P1 BASIC11.49□□□□□ -0.57
Trav3-1Q5R1I8 Cdc37l1-204ENSMUST00000224511 2944 ntAPPRIS ALT2 BASIC11.49□□□□□ -0.57
Trav3-1Q5R1I8 Cacna2d3-201ENSMUST00000022567 3695 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trav3-1Q5R1I8 Mcoln2-202ENSMUST00000098524 2492 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trav3-1Q5R1I8 Rbsn-201ENSMUST00000014694 5334 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trav3-1Q5R1I8 Gm45447-201ENSMUST00000209874 1805 ntTSL 5 BASIC11.49□□□□□ -0.57
Retrieved 100 of 76,532 protein–RNA pairs in 33 ms