Protein–RNA interactions for Protein: Q5R1I4

Trav6-2, T cell receptor alpha variable 6-2 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6-2Q5R1I4 Xkr6-201ENSMUST00000119973 2963 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trav6-2Q5R1I4 Tmem39b-201ENSMUST00000102588 1810 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trav6-2Q5R1I4 Gm11373-201ENSMUST00000129791 2819 ntTSL 5 BASIC14.87□□□□□ -0.03
Trav6-2Q5R1I4 Sarm1-202ENSMUST00000108287 4868 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Trav6-2Q5R1I4 C1ql3-201ENSMUST00000061545 2535 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trav6-2Q5R1I4 Sirt1-207ENSMUST00000177694 3353 ntTSL 5 BASIC14.87□□□□□ -0.03
Trav6-2Q5R1I4 Cacna1h-202ENSMUST00000159048 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trav6-2Q5R1I4 Acads-201ENSMUST00000031524 1870 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trav6-2Q5R1I4 Fdps-203ENSMUST00000196709 1382 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
Trav6-2Q5R1I4 Naif1-201ENSMUST00000048431 4650 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trav6-2Q5R1I4 Kif7-202ENSMUST00000178048 4524 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trav6-2Q5R1I4 Keap1-206ENSMUST00000216436 2498 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
Trav6-2Q5R1I4 Plin5-202ENSMUST00000113072 1986 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trav6-2Q5R1I4 Gm3468-201ENSMUST00000165193 1955 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
Trav6-2Q5R1I4 Gm2956-201ENSMUST00000177786 1955 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
Trav6-2Q5R1I4 Phf7-203ENSMUST00000226565 1971 ntBASIC14.86□□□□□ -0.03
Trav6-2Q5R1I4 Nectin3-201ENSMUST00000023334 3062 ntAPPRIS P4 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trav6-2Q5R1I4 Cd82-204ENSMUST00000111257 1003 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
Trav6-2Q5R1I4 Znhit2-201ENSMUST00000162726 1281 ntAPPRIS P1 BASIC14.86□□□□□ -0.03
Trav6-2Q5R1I4 Mpst-202ENSMUST00000167140 1279 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
Trav6-2Q5R1I4 Fbxo6-208ENSMUST00000168503 1240 ntAPPRIS P1 TSL 2 BASIC14.86□□□□□ -0.03
Trav6-2Q5R1I4 Arl5b-206ENSMUST00000193836 481 ntTSL 2 BASIC14.86□□□□□ -0.03
Trav6-2Q5R1I4 Ppib-201ENSMUST00000034947 892 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trav6-2Q5R1I4 Hist1h2ad-201ENSMUST00000090776 572 ntAPPRIS P1 BASIC14.86□□□□□ -0.03
Trav6-2Q5R1I4 Pitpnm1-201ENSMUST00000049658 4206 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trav6-2Q5R1I4 Cobll1-205ENSMUST00000112431 5024 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trav6-2Q5R1I4 Iqcd-202ENSMUST00000094391 1673 ntAPPRIS P2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trav6-2Q5R1I4 Iqsec2-202ENSMUST00000112604 5967 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trav6-2Q5R1I4 Gsg1-201ENSMUST00000087729 1307 ntAPPRIS P4 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trav6-2Q5R1I4 Pcnp-202ENSMUST00000114444 2295 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trav6-2Q5R1I4 Zfp623-201ENSMUST00000037260 2463 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trav6-2Q5R1I4 Ubr3-202ENSMUST00000112251 8081 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
Trav6-2Q5R1I4 Pard3-209ENSMUST00000160272 5815 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trav6-2Q5R1I4 Dap-201ENSMUST00000044524 1555 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trav6-2Q5R1I4 Rbl2-201ENSMUST00000034091 4925 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trav6-2Q5R1I4 Adgrv1-207ENSMUST00000128585 2580 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Trav6-2Q5R1I4 Glmn-201ENSMUST00000078021 2015 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trav6-2Q5R1I4 Gm16897-201ENSMUST00000180780 2492 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Trav6-2Q5R1I4 Mrm1-201ENSMUST00000018549 2477 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trav6-2Q5R1I4 Itpkb-201ENSMUST00000070181 6235 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trav6-2Q5R1I4 Gm5828-201ENSMUST00000071842 1860 ntBASIC14.85□□□□□ -0.03
Trav6-2Q5R1I4 Bnc2-214ENSMUST00000176612 3963 ntTSL 5 BASIC14.85□□□□□ -0.03
Trav6-2Q5R1I4 Cd37-204ENSMUST00000209779 2541 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Trav6-2Q5R1I4 Gm43077-201ENSMUST00000200602 491 ntTSL 3 BASIC14.85□□□□□ -0.03
Trav6-2Q5R1I4 BC048679-203ENSMUST00000207871 567 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trav6-2Q5R1I4 Rad51d-203ENSMUST00000092844 1228 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Trav6-2Q5R1I4 Ebf3-204ENSMUST00000169486 4994 ntAPPRIS ALT1 TSL 5 BASIC14.85□□□□□ -0.03
Trav6-2Q5R1I4 Ccdc3-201ENSMUST00000027988 2670 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trav6-2Q5R1I4 Plxnd1-201ENSMUST00000015511 6907 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trav6-2Q5R1I4 Gm6190-201ENSMUST00000220683 1374 ntBASIC14.85□□□□□ -0.03
Trav6-2Q5R1I4 Brpf1-202ENSMUST00000113119 4826 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trav6-2Q5R1I4 Rprd1b-207ENSMUST00000152452 1910 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Trav6-2Q5R1I4 Dzip3-202ENSMUST00000121869 5820 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
Trav6-2Q5R1I4 Arfip1-202ENSMUST00000107687 1714 ntTSL 5 BASIC14.84□□□□□ -0.03
Trav6-2Q5R1I4 Gm26592-201ENSMUST00000180870 1730 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Trav6-2Q5R1I4 Tmem94-202ENSMUST00000103033 5238 ntAPPRIS P2 TSL 2 BASIC14.84□□□□□ -0.03
Trav6-2Q5R1I4 Rnf141-201ENSMUST00000106682 1101 ntAPPRIS P1 TSL 3 BASIC14.84□□□□□ -0.03
Trav6-2Q5R1I4 Pnmt-201ENSMUST00000041301 1154 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trav6-2Q5R1I4 Zic1-202ENSMUST00000065360 2811 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trav6-2Q5R1I4 Dhx30-224ENSMUST00000200066 4623 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trav6-2Q5R1I4 Mgme1-203ENSMUST00000110028 2308 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trav6-2Q5R1I4 Sept10-203ENSMUST00000220156 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trav6-2Q5R1I4 Trim14-202ENSMUST00000102924 1582 ntTSL 2 BASIC14.84□□□□□ -0.03
Trav6-2Q5R1I4 Usp47-201ENSMUST00000106653 5540 ntAPPRIS P3 TSL 5 BASIC14.84□□□□□ -0.03
Trav6-2Q5R1I4 Galnt13-204ENSMUST00000112636 7530 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trav6-2Q5R1I4 Prmt3-201ENSMUST00000032715 2507 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trav6-2Q5R1I4 Crhbp-201ENSMUST00000045583 1701 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
Trav6-2Q5R1I4 Acbd6-201ENSMUST00000035560 5592 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Trav6-2Q5R1I4 Enpp1-202ENSMUST00000105520 6777 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.03
Trav6-2Q5R1I4 Gm9917-202ENSMUST00000181099 1499 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
Trav6-2Q5R1I4 Hgsnat-201ENSMUST00000037609 2694 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Trav6-2Q5R1I4 Helt-201ENSMUST00000058636 1541 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Trav6-2Q5R1I4 Ttc14-203ENSMUST00000117915 4913 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Trav6-2Q5R1I4 Lcn12-202ENSMUST00000114245 619 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Trav6-2Q5R1I4 Mis18bp1-202ENSMUST00000124201 717 ntTSL 3 BASIC14.83□□□□□ -0.04
Trav6-2Q5R1I4 Atp6v0b-208ENSMUST00000150204 935 ntTSL 5 BASIC14.83□□□□□ -0.04
Trav6-2Q5R1I4 Epsti1-202ENSMUST00000169978 1175 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.04
Trav6-2Q5R1I4 Flg-202ENSMUST00000178008 768 ntAPPRIS ALT2 BASIC14.83□□□□□ -0.04
Trav6-2Q5R1I4 Flg-205ENSMUST00000179250 765 ntAPPRIS ALT2 BASIC14.83□□□□□ -0.04
Trav6-2Q5R1I4 Flg-206ENSMUST00000179477 768 ntAPPRIS ALT2 BASIC14.83□□□□□ -0.04
Trav6-2Q5R1I4 Ankrd23-204ENSMUST00000194853 1073 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Trav6-2Q5R1I4 Gm35154-202ENSMUST00000217008 1093 ntTSL 5 BASIC14.83□□□□□ -0.04
Trav6-2Q5R1I4 AC133598.3-202ENSMUST00000224219 531 ntBASIC14.83□□□□□ -0.04
Trav6-2Q5R1I4 Epsti1-203ENSMUST00000227903 1178 ntAPPRIS ALT2 BASIC14.83□□□□□ -0.04
Trav6-2Q5R1I4 Ppp2r2d-207ENSMUST00000155672 1938 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Trav6-2Q5R1I4 Kcns2-201ENSMUST00000072868 5456 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Trav6-2Q5R1I4 Fam222a-201ENSMUST00000043650 2930 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Trav6-2Q5R1I4 Tmem245-202ENSMUST00000107609 2643 ntAPPRIS P2 TSL 5 BASIC14.83□□□□□ -0.04
Trav6-2Q5R1I4 Hsd17b1-201ENSMUST00000019445 1339 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Trav6-2Q5R1I4 Fgf17-201ENSMUST00000022697 1689 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Trav6-2Q5R1I4 Tmed4-201ENSMUST00000004508 2003 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Trav6-2Q5R1I4 Zfc3h1-201ENSMUST00000036044 6957 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Trav6-2Q5R1I4 Acaa1a-201ENSMUST00000039784 1762 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Trav6-2Q5R1I4 St3gal2-201ENSMUST00000034197 4396 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Trav6-2Q5R1I4 Arfip2-202ENSMUST00000084782 2254 ntAPPRIS P2 TSL 5 BASIC14.82□□□□□ -0.04
Trav6-2Q5R1I4 Rev1-201ENSMUST00000027251 4262 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trav6-2Q5R1I4 Pcolce-202ENSMUST00000054564 1585 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
Trav6-2Q5R1I4 Gm26892-201ENSMUST00000181695 1636 ntTSL 5 BASIC14.82□□□□□ -0.04
Trav6-2Q5R1I4 Gfi1-201ENSMUST00000031205 2860 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trav6-2Q5R1I4 Bfsp2-201ENSMUST00000124310 1662 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 23.5 ms