Protein–RNA interactions for Protein: Q5R1C3

Trav3-3, T cell receptor alpha variable 3-3 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav3-3Q5R1C3 Hes3-202ENSMUST00000218045 962 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
Trav3-3Q5R1C3 Avp-201ENSMUST00000046001 577 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav3-3Q5R1C3 Sap18b-201ENSMUST00000074053 789 ntAPPRIS P1 BASIC12.74□□□□□ -0.37
Trav3-3Q5R1C3 1700007K13Rik-201ENSMUST00000086370 812 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav3-3Q5R1C3 Polr3e-203ENSMUST00000207481 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav3-3Q5R1C3 Igf2-202ENSMUST00000097936 2503 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
Trav3-3Q5R1C3 Slc46a3-201ENSMUST00000031655 2434 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav3-3Q5R1C3 Mcidas-201ENSMUST00000092089 2377 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav3-3Q5R1C3 Anks1b-214ENSMUST00000182356 7561 ntTSL 5 BASIC12.74□□□□□ -0.37
Trav3-3Q5R1C3 Chd3-201ENSMUST00000092971 6066 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
Trav3-3Q5R1C3 Zfp451-201ENSMUST00000019861 3958 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav3-3Q5R1C3 Shq1-204ENSMUST00000170667 1990 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav3-3Q5R1C3 Ltbp1-201ENSMUST00000001927 6671 ntTSL 5 BASIC12.74□□□□□ -0.37
Trav3-3Q5R1C3 Arrb2-204ENSMUST00000102564 1848 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav3-3Q5R1C3 Fyn-202ENSMUST00000099967 3528 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav3-3Q5R1C3 Fbxo30-202ENSMUST00000129456 5060 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav3-3Q5R1C3 Ddx50-201ENSMUST00000020270 2535 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav3-3Q5R1C3 Gm12522-201ENSMUST00000142833 2439 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Trav3-3Q5R1C3 Klhdc4-205ENSMUST00000174192 1584 ntTSL 5 BASIC12.73□□□□□ -0.37
Trav3-3Q5R1C3 Ubp1-202ENSMUST00000084885 3850 ntAPPRIS P4 TSL 5 BASIC12.73□□□□□ -0.37
Trav3-3Q5R1C3 Tmem33-204ENSMUST00000161369 6164 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav3-3Q5R1C3 Memo1-201ENSMUST00000078459 1513 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav3-3Q5R1C3 Ggnbp2-203ENSMUST00000108081 3034 ntAPPRIS P2 TSL 5 BASIC12.73□□□□□ -0.37
Trav3-3Q5R1C3 Rnf138-202ENSMUST00000072847 3002 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Trav3-3Q5R1C3 Sipa1l1-202ENSMUST00000166429 8215 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav3-3Q5R1C3 Efr3b-201ENSMUST00000111178 6547 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav3-3Q5R1C3 Spdef-202ENSMUST00000114870 2070 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
Trav3-3Q5R1C3 AC161052.2-201ENSMUST00000220969 1375 ntTSL 5 BASIC12.73□□□□□ -0.37
Trav3-3Q5R1C3 Glis1-202ENSMUST00000106738 2744 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
Trav3-3Q5R1C3 9430015G10Rik-208ENSMUST00000169550 2660 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
Trav3-3Q5R1C3 B4galt3-201ENSMUST00000064272 1998 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav3-3Q5R1C3 A930004D18Rik-201ENSMUST00000066163 3217 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav3-3Q5R1C3 Cdkn2a-202ENSMUST00000107131 895 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav3-3Q5R1C3 Aktip-201ENSMUST00000109609 1171 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav3-3Q5R1C3 Cab39-202ENSMUST00000113360 3805 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav3-3Q5R1C3 Igfbp7-202ENSMUST00000163898 1200 ntAPPRIS P4 TSL 5 BASIC12.73□□□□□ -0.37
Trav3-3Q5R1C3 Gm20548-204ENSMUST00000174528 791 ntTSL 3 BASIC12.73□□□□□ -0.37
Trav3-3Q5R1C3 Trmt112-201ENSMUST00000088257 957 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav3-3Q5R1C3 Pkig-202ENSMUST00000099105 640 ntAPPRIS P1 TSL 2 BASIC12.73□□□□□ -0.37
Trav3-3Q5R1C3 Dnajb9-201ENSMUST00000015049 2461 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav3-3Q5R1C3 Tsks-202ENSMUST00000120929 1843 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav3-3Q5R1C3 Scara3-201ENSMUST00000042046 3597 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav3-3Q5R1C3 Ggnbp2-213ENSMUST00000172405 2950 ntAPPRIS P2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav3-3Q5R1C3 Arhgap44-201ENSMUST00000047463 4074 ntAPPRIS P2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav3-3Q5R1C3 Ssfa2-202ENSMUST00000111785 5168 ntAPPRIS P2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav3-3Q5R1C3 Wisp2-201ENSMUST00000029188 1719 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav3-3Q5R1C3 Slco3a1-201ENSMUST00000026897 4589 ntAPPRIS P4 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav3-3Q5R1C3 Cog8-202ENSMUST00000095517 4476 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav3-3Q5R1C3 Gm29208-203ENSMUST00000213687 2219 ntTSL 5 BASIC12.73□□□□□ -0.37
Trav3-3Q5R1C3 Adam23-204ENSMUST00000114103 2655 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
Trav3-3Q5R1C3 Wbp4-201ENSMUST00000022601 3704 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav3-3Q5R1C3 Slc16a6-202ENSMUST00000070152 4219 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav3-3Q5R1C3 2010016I18Rik-204ENSMUST00000190356 1562 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Trav3-3Q5R1C3 Trpc3-201ENSMUST00000029271 3694 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav3-3Q5R1C3 Rab37-202ENSMUST00000067754 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav3-3Q5R1C3 Art5-201ENSMUST00000094128 1518 ntAPPRIS P1 TSL 2 BASIC12.72□□□□□ -0.37
Trav3-3Q5R1C3 Entpd6-201ENSMUST00000094467 2540 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav3-3Q5R1C3 Fgf11-202ENSMUST00000102585 3039 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav3-3Q5R1C3 Dgkq-201ENSMUST00000053913 4938 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav3-3Q5R1C3 Matk-203ENSMUST00000119547 1916 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav3-3Q5R1C3 Lurap1-201ENSMUST00000030469 5742 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav3-3Q5R1C3 Klhl40-201ENSMUST00000098272 2370 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav3-3Q5R1C3 Kitl-202ENSMUST00000105283 5648 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav3-3Q5R1C3 Miga1-202ENSMUST00000073089 4965 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav3-3Q5R1C3 Snrpb-201ENSMUST00000103199 1161 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav3-3Q5R1C3 Wdr4-203ENSMUST00000167419 813 ntTSL 3 BASIC12.72□□□□□ -0.37
Trav3-3Q5R1C3 Mrap2-203ENSMUST00000179313 2039 ntAPPRIS P1 TSL 2 BASIC12.72□□□□□ -0.37
Trav3-3Q5R1C3 Olfm2-204ENSMUST00000217198 2005 ntAPPRIS ALT2 TSL 3 BASIC12.72□□□□□ -0.37
Trav3-3Q5R1C3 Slc1a6-201ENSMUST00000005490 2029 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav3-3Q5R1C3 Ap1g1-202ENSMUST00000093157 6899 ntAPPRIS P3 TSL 5 BASIC12.72□□□□□ -0.37
Trav3-3Q5R1C3 Dlg4-201ENSMUST00000018700 3204 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav3-3Q5R1C3 Gcgr-201ENSMUST00000026119 1957 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav3-3Q5R1C3 Phax-201ENSMUST00000008445 1942 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav3-3Q5R1C3 Nrxn1-204ENSMUST00000159778 3414 ntTSL 5 BASIC12.72□□□□□ -0.37
Trav3-3Q5R1C3 Letm2-208ENSMUST00000210616 2974 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Trav3-3Q5R1C3 Ppp2r5e-201ENSMUST00000021447 4810 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav3-3Q5R1C3 Ppp1r2-201ENSMUST00000060188 4078 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav3-3Q5R1C3 Daxx-201ENSMUST00000079421 2580 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav3-3Q5R1C3 Ube2d-ps-204ENSMUST00000137510 1846 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Trav3-3Q5R1C3 Grin3b-201ENSMUST00000045085 3283 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav3-3Q5R1C3 Prss56-201ENSMUST00000044533 2180 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trav3-3Q5R1C3 Rbm15-201ENSMUST00000061772 4343 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trav3-3Q5R1C3 M5C1000I18Rik-202ENSMUST00000186205 1414 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Trav3-3Q5R1C3 Cdc37l1-205ENSMUST00000224599 1769 ntBASIC12.71□□□□□ -0.37
Trav3-3Q5R1C3 Tmed4-201ENSMUST00000004508 2003 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trav3-3Q5R1C3 Stambpl1-201ENSMUST00000054956 2024 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trav3-3Q5R1C3 Tmprss5-201ENSMUST00000070390 2047 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trav3-3Q5R1C3 F2-201ENSMUST00000028681 1988 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trav3-3Q5R1C3 Hectd3-201ENSMUST00000050067 4583 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trav3-3Q5R1C3 Anks1-201ENSMUST00000025058 6844 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trav3-3Q5R1C3 Dynlt1f-201ENSMUST00000179554 807 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trav3-3Q5R1C3 Gm26833-201ENSMUST00000180899 440 ntBASIC12.71□□□□□ -0.37
Trav3-3Q5R1C3 Trnau1ap-201ENSMUST00000030730 1130 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trav3-3Q5R1C3 Atp6v1b1-206ENSMUST00000206911 1591 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Trav3-3Q5R1C3 Syt6-202ENSMUST00000117221 4394 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Trav3-3Q5R1C3 1700052K11Rik-201ENSMUST00000190120 3708 ntBASIC12.71□□□□□ -0.37
Trav3-3Q5R1C3 Scrt1-201ENSMUST00000096365 4010 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trav3-3Q5R1C3 Ube2d3-208ENSMUST00000197134 2493 ntAPPRIS ALT1 TSL 5 BASIC12.71□□□□□ -0.37
Trav3-3Q5R1C3 Cap1-203ENSMUST00000106257 2768 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Trav3-3Q5R1C3 Zswim4-201ENSMUST00000039480 4625 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 28.4 ms