Protein–RNA interactions for Protein: Q4VBF2

R3hdm4, R3H domain-containing protein 4, mousemouse

Predictions only

Length 262 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
R3hdm4Q4VBF2 Gm26526-201ENSMUST00000181075 2927 ntTSL 5 BASIC18.22■□□□□ 0.51
R3hdm4Q4VBF2 Gm45203-201ENSMUST00000206384 1831 ntBASIC18.22■□□□□ 0.51
R3hdm4Q4VBF2 Ndufaf8-201ENSMUST00000106223 781 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
R3hdm4Q4VBF2 Cenps-201ENSMUST00000030813 1110 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
R3hdm4Q4VBF2 Spsb2-202ENSMUST00000052727 1219 ntAPPRIS P1 TSL 3 BASIC18.22■□□□□ 0.51
R3hdm4Q4VBF2 Gzme-201ENSMUST00000089549 916 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
R3hdm4Q4VBF2 Sox18-201ENSMUST00000054491 1620 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
R3hdm4Q4VBF2 Gm16401-202ENSMUST00000197463 2074 ntBASIC18.22■□□□□ 0.51
R3hdm4Q4VBF2 Obsl1-202ENSMUST00000113567 5679 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
R3hdm4Q4VBF2 Gm3468-201ENSMUST00000165193 1955 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
R3hdm4Q4VBF2 Gm2956-201ENSMUST00000177786 1955 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
R3hdm4Q4VBF2 Gm16638-201ENSMUST00000148687 1865 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
R3hdm4Q4VBF2 Tmem163-203ENSMUST00000160616 2657 ntAPPRIS P1 TSL 2 BASIC18.22■□□□□ 0.51
R3hdm4Q4VBF2 Usb1-201ENSMUST00000034245 1758 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
R3hdm4Q4VBF2 Ptpdc1-204ENSMUST00000222028 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
R3hdm4Q4VBF2 Disc1-208ENSMUST00000122389 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
R3hdm4Q4VBF2 Wnk2-205ENSMUST00000110097 6882 ntAPPRIS ALT2 TSL 5 BASIC18.22■□□□□ 0.51
R3hdm4Q4VBF2 Wnk2-203ENSMUST00000091623 6897 ntAPPRIS P4 TSL 5 BASIC18.22■□□□□ 0.51
R3hdm4Q4VBF2 Nsmf-203ENSMUST00000100334 2957 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
R3hdm4Q4VBF2 Klhdc8a-201ENSMUST00000046071 4269 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
R3hdm4Q4VBF2 Appl2-201ENSMUST00000020500 3020 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
R3hdm4Q4VBF2 Zdhhc6-209ENSMUST00000225495 1711 ntBASIC18.21■□□□□ 0.51
R3hdm4Q4VBF2 Mrpl49-201ENSMUST00000007482 1722 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
R3hdm4Q4VBF2 Snip1-201ENSMUST00000052183 2345 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
R3hdm4Q4VBF2 Phf7-203ENSMUST00000226565 1971 ntBASIC18.21■□□□□ 0.51
R3hdm4Q4VBF2 Dtx2-201ENSMUST00000005072 2562 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
R3hdm4Q4VBF2 Krt81-201ENSMUST00000061185 1857 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
R3hdm4Q4VBF2 Ppdpf-201ENSMUST00000016488 1160 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
R3hdm4Q4VBF2 Bcl7c-205ENSMUST00000205977 891 ntTSL 2 BASIC18.21■□□□□ 0.51
R3hdm4Q4VBF2 Wdr74-202ENSMUST00000210512 1078 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
R3hdm4Q4VBF2 Pdrg1-201ENSMUST00000028972 1273 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
R3hdm4Q4VBF2 Sox6os-201ENSMUST00000032900 420 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
R3hdm4Q4VBF2 Lce1h-201ENSMUST00000051521 706 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
R3hdm4Q4VBF2 Krtcap3-201ENSMUST00000054829 904 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
R3hdm4Q4VBF2 Cenpw-201ENSMUST00000099985 1532 ntAPPRIS P2 TSL 1 (best) BASIC18.21■□□□□ 0.51
R3hdm4Q4VBF2 Crocc-211ENSMUST00000168157 6244 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
R3hdm4Q4VBF2 Crocc-201ENSMUST00000040222 6248 ntTSL 5 BASIC18.21■□□□□ 0.51
R3hdm4Q4VBF2 Asap2-204ENSMUST00000101562 5552 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
R3hdm4Q4VBF2 Spats2l-212ENSMUST00000170139 2315 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
R3hdm4Q4VBF2 Uchl5-201ENSMUST00000018333 1845 ntAPPRIS ALT1 TSL 1 (best) BASIC18.21■□□□□ 0.51
R3hdm4Q4VBF2 L3hypdh-201ENSMUST00000019862 1831 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
R3hdm4Q4VBF2 Cul4a-201ENSMUST00000016680 3728 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
R3hdm4Q4VBF2 AU022751-202ENSMUST00000117544 2201 ntAPPRIS P4 BASIC18.21■□□□□ 0.5
R3hdm4Q4VBF2 Sar1a-201ENSMUST00000020285 2613 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
R3hdm4Q4VBF2 Zbtb22-201ENSMUST00000053429 2611 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
R3hdm4Q4VBF2 Mipep-201ENSMUST00000063562 3015 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
R3hdm4Q4VBF2 Smarca4-202ENSMUST00000098948 6376 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
R3hdm4Q4VBF2 Gm26548-201ENSMUST00000181165 2029 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
R3hdm4Q4VBF2 Ahr-202ENSMUST00000116436 5548 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
R3hdm4Q4VBF2 F830208F22Rik-202ENSMUST00000143732 2891 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
R3hdm4Q4VBF2 Gpha2-202ENSMUST00000113526 762 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
R3hdm4Q4VBF2 Gmcl1-202ENSMUST00000113679 960 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
R3hdm4Q4VBF2 Gm13186-201ENSMUST00000118031 316 ntBASIC18.2■□□□□ 0.5
R3hdm4Q4VBF2 Hist1h2br-203ENSMUST00000180288 1256 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
R3hdm4Q4VBF2 Ankrd39-202ENSMUST00000194894 664 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
R3hdm4Q4VBF2 Gm18101-201ENSMUST00000215769 548 ntBASIC18.2■□□□□ 0.5
R3hdm4Q4VBF2 Gpha2-201ENSMUST00000025698 609 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
R3hdm4Q4VBF2 Med29-201ENSMUST00000003536 1281 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
R3hdm4Q4VBF2 Cltb-201ENSMUST00000049575 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
R3hdm4Q4VBF2 Vpreb1-201ENSMUST00000075017 766 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
R3hdm4Q4VBF2 Hist1h2bq-202ENSMUST00000091749 1254 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
R3hdm4Q4VBF2 Cpox-201ENSMUST00000060077 3186 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
R3hdm4Q4VBF2 Ccni-201ENSMUST00000058550 2804 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
R3hdm4Q4VBF2 Sntg2-201ENSMUST00000021004 2411 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
R3hdm4Q4VBF2 Slc35e1-202ENSMUST00000152080 4383 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
R3hdm4Q4VBF2 Abhd13-201ENSMUST00000048216 5074 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
R3hdm4Q4VBF2 Slc6a8-206ENSMUST00000164449 2151 ntTSL 5 BASIC18.2■□□□□ 0.5
R3hdm4Q4VBF2 Col15a1-202ENSMUST00000102917 5172 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
R3hdm4Q4VBF2 Qprt-201ENSMUST00000032912 2050 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
R3hdm4Q4VBF2 P2rx5-201ENSMUST00000006104 2395 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
R3hdm4Q4VBF2 Gm7292-201ENSMUST00000194706 2527 ntBASIC18.19■□□□□ 0.5
R3hdm4Q4VBF2 Eefsec-201ENSMUST00000165242 2679 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
R3hdm4Q4VBF2 Gdf15-201ENSMUST00000003808 1545 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
R3hdm4Q4VBF2 Bpifb4-203ENSMUST00000109759 2115 ntAPPRIS P2 TSL 5 BASIC18.19■□□□□ 0.5
R3hdm4Q4VBF2 Ccdc6-203ENSMUST00000147545 5511 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
R3hdm4Q4VBF2 Ust-201ENSMUST00000061601 4228 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
R3hdm4Q4VBF2 Hist1h2bf-201ENSMUST00000105106 461 ntAPPRIS P1 BASIC18.19■□□□□ 0.5
R3hdm4Q4VBF2 Gm13420-201ENSMUST00000129574 1091 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
R3hdm4Q4VBF2 Trim54-201ENSMUST00000013771 1434 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
R3hdm4Q4VBF2 Gm26039-201ENSMUST00000158152 144 ntBASIC18.19■□□□□ 0.5
R3hdm4Q4VBF2 Prr3-209ENSMUST00000174849 581 ntTSL 2 BASIC18.19■□□□□ 0.5
R3hdm4Q4VBF2 4930544D05Rik-204ENSMUST00000180052 755 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
R3hdm4Q4VBF2 Sult2b1-204ENSMUST00000209739 1858 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
R3hdm4Q4VBF2 Gm21559-201ENSMUST00000220638 855 ntBASIC18.19■□□□□ 0.5
R3hdm4Q4VBF2 Iscu-201ENSMUST00000026937 957 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
R3hdm4Q4VBF2 Krtap1-5-201ENSMUST00000054532 1041 ntAPPRIS P1 BASIC18.19■□□□□ 0.5
R3hdm4Q4VBF2 Gm8587-201ENSMUST00000076538 843 ntBASIC18.19■□□□□ 0.5
R3hdm4Q4VBF2 Mafg-201ENSMUST00000058162 4923 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
R3hdm4Q4VBF2 Hnrnph1-201ENSMUST00000069304 2225 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
R3hdm4Q4VBF2 Isyna1-204ENSMUST00000210005 1914 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
R3hdm4Q4VBF2 Nisch-221ENSMUST00000171735 1763 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
R3hdm4Q4VBF2 2810408A11Rik-204ENSMUST00000108621 1455 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
R3hdm4Q4VBF2 Nagk-203ENSMUST00000113851 1323 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
R3hdm4Q4VBF2 Dbndd2-201ENSMUST00000017878 1338 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
R3hdm4Q4VBF2 Igfbp2-201ENSMUST00000047328 1307 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
R3hdm4Q4VBF2 Zpbp2-202ENSMUST00000081033 1300 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
R3hdm4Q4VBF2 Chtf8-206ENSMUST00000177068 2931 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
R3hdm4Q4VBF2 Dus3l-201ENSMUST00000007747 2303 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
R3hdm4Q4VBF2 Il9r-204ENSMUST00000142396 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
R3hdm4Q4VBF2 Timm44-201ENSMUST00000003029 1790 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Retrieved 100 of 76,532 protein–RNA pairs in 44.8 ms