Protein–RNA interactions for Protein: Q3UQS2

Lsmem1, Leucine-rich single-pass membrane protein 1, mousemouse

Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsmem1Q3UQS2 Xpa-201ENSMUST00000030013 955 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Lsmem1Q3UQS2 Hoxa6-201ENSMUST00000062829 874 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Lsmem1Q3UQS2 Ldlrad1-201ENSMUST00000094916 1093 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
Lsmem1Q3UQS2 Rcc1-201ENSMUST00000030726 2278 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Lsmem1Q3UQS2 Camk2d-228ENSMUST00000200171 5396 ntTSL 5 BASIC17.15■□□□□ 0.34
Lsmem1Q3UQS2 Ank1-207ENSMUST00000118733 8201 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Lsmem1Q3UQS2 Mst1-204ENSMUST00000162886 2209 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
Lsmem1Q3UQS2 Baiap2-202ENSMUST00000075180 3518 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.34
Lsmem1Q3UQS2 Rasd1-201ENSMUST00000062405 1611 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Lsmem1Q3UQS2 Dusp9-201ENSMUST00000019701 2722 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Lsmem1Q3UQS2 Celf3-208ENSMUST00000198316 2505 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Lsmem1Q3UQS2 Gm11748-201ENSMUST00000153825 1498 ntTSL 2 BASIC17.14■□□□□ 0.33
Lsmem1Q3UQS2 Tulp1-202ENSMUST00000114794 1738 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Lsmem1Q3UQS2 Lats2-201ENSMUST00000022531 5191 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Lsmem1Q3UQS2 Prickle4-201ENSMUST00000113299 990 ntTSL 5 BASIC17.14■□□□□ 0.33
Lsmem1Q3UQS2 Prickle4-202ENSMUST00000113300 1110 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
Lsmem1Q3UQS2 Hist1h2br-203ENSMUST00000180288 1256 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Lsmem1Q3UQS2 Fgf8-201ENSMUST00000026240 1117 ntAPPRIS P4 TSL 1 (best) BASIC17.14■□□□□ 0.33
Lsmem1Q3UQS2 Pdrg1-201ENSMUST00000028972 1273 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Lsmem1Q3UQS2 0610009B22Rik-201ENSMUST00000007921 813 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Lsmem1Q3UQS2 Hist1h2bq-202ENSMUST00000091749 1254 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Lsmem1Q3UQS2 AC122335.2-201ENSMUST00000213901 6181 ntBASIC17.14■□□□□ 0.33
Lsmem1Q3UQS2 Ccdc106-204ENSMUST00000207974 2492 ntTSL 2 BASIC17.14■□□□□ 0.33
Lsmem1Q3UQS2 Timm44-201ENSMUST00000003029 1790 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Lsmem1Q3UQS2 Nosip-201ENSMUST00000003513 1814 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
Lsmem1Q3UQS2 Fam149b-216ENSMUST00000225942 2151 ntAPPRIS ALT2 BASIC17.13■□□□□ 0.33
Lsmem1Q3UQS2 Appl2-201ENSMUST00000020500 3020 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Lsmem1Q3UQS2 Cdc42ep3-201ENSMUST00000068958 1967 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Lsmem1Q3UQS2 Chka-202ENSMUST00000072055 2549 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
Lsmem1Q3UQS2 Cenpw-201ENSMUST00000099985 1532 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Lsmem1Q3UQS2 Ppdpf-201ENSMUST00000016488 1160 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Lsmem1Q3UQS2 4930544D05Rik-204ENSMUST00000180052 755 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
Lsmem1Q3UQS2 Cmc1-202ENSMUST00000215799 531 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Lsmem1Q3UQS2 Uchl3-201ENSMUST00000002289 903 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Lsmem1Q3UQS2 Ly6h-202ENSMUST00000065417 985 ntAPPRIS ALT1 TSL 2 BASIC17.13■□□□□ 0.33
Lsmem1Q3UQS2 Hist1h2ai-201ENSMUST00000070124 393 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
Lsmem1Q3UQS2 Hist1h2an-201ENSMUST00000091751 393 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
Lsmem1Q3UQS2 Fam20c-201ENSMUST00000026972 3582 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Lsmem1Q3UQS2 Zcchc4-203ENSMUST00000113904 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Lsmem1Q3UQS2 Ust-201ENSMUST00000061601 4228 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Lsmem1Q3UQS2 Ngrn-201ENSMUST00000117989 1317 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Lsmem1Q3UQS2 Slc16a7-205ENSMUST00000210780 2562 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
Lsmem1Q3UQS2 Matk-202ENSMUST00000117488 1980 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
Lsmem1Q3UQS2 Cnpy1-202ENSMUST00000118882 1984 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Lsmem1Q3UQS2 Gm6190-201ENSMUST00000220683 1374 ntBASIC17.13■□□□□ 0.33
Lsmem1Q3UQS2 Fxyd6-201ENSMUST00000085939 1788 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Lsmem1Q3UQS2 Itga9-201ENSMUST00000044165 7020 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Lsmem1Q3UQS2 Gm9917-202ENSMUST00000181099 1499 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Lsmem1Q3UQS2 Gpr161-202ENSMUST00000178700 1827 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Lsmem1Q3UQS2 Taf6l-205ENSMUST00000176496 2224 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Lsmem1Q3UQS2 Fnbp1-205ENSMUST00000113552 1910 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Lsmem1Q3UQS2 Psen2-205ENSMUST00000111108 1997 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Lsmem1Q3UQS2 AA467197-202ENSMUST00000110512 751 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Lsmem1Q3UQS2 Ccdc125-202ENSMUST00000170347 1216 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Lsmem1Q3UQS2 Lsm1-203ENSMUST00000211168 343 ntTSL 3 BASIC17.12■□□□□ 0.33
Lsmem1Q3UQS2 AC121577.1-201ENSMUST00000227302 707 ntBASIC17.12■□□□□ 0.33
Lsmem1Q3UQS2 Lce1h-201ENSMUST00000051521 706 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Lsmem1Q3UQS2 Sntg2-201ENSMUST00000021004 2411 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Lsmem1Q3UQS2 Rassf8-203ENSMUST00000111704 5446 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
Lsmem1Q3UQS2 4930455H04Rik-201ENSMUST00000117592 1341 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Lsmem1Q3UQS2 Erich2-201ENSMUST00000100041 1749 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Lsmem1Q3UQS2 Trip10-205ENSMUST00000224885 2136 ntAPPRIS ALT2 BASIC17.12■□□□□ 0.33
Lsmem1Q3UQS2 Tubb6-201ENSMUST00000001513 1757 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Lsmem1Q3UQS2 Rundc3a-202ENSMUST00000107102 1837 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
Lsmem1Q3UQS2 2810408A11Rik-204ENSMUST00000108621 1455 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
Lsmem1Q3UQS2 Phf7-203ENSMUST00000226565 1971 ntBASIC17.11■□□□□ 0.33
Lsmem1Q3UQS2 Coro1a-201ENSMUST00000032949 1660 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Lsmem1Q3UQS2 Cbarp-201ENSMUST00000105369 3121 ntAPPRIS P2 TSL 5 BASIC17.11■□□□□ 0.33
Lsmem1Q3UQS2 Klhl5-204ENSMUST00000204097 3149 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Lsmem1Q3UQS2 Coq8b-202ENSMUST00000108378 2276 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Lsmem1Q3UQS2 Nisch-221ENSMUST00000171735 1763 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Lsmem1Q3UQS2 Gpha2-202ENSMUST00000113526 762 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
Lsmem1Q3UQS2 Gm26039-201ENSMUST00000158152 144 ntBASIC17.11■□□□□ 0.33
Lsmem1Q3UQS2 Rpl14-201ENSMUST00000165532 1009 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Lsmem1Q3UQS2 Gm22697-201ENSMUST00000175194 63 ntBASIC17.11■□□□□ 0.33
Lsmem1Q3UQS2 Gpha2-201ENSMUST00000025698 609 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Lsmem1Q3UQS2 Csnk1g3-201ENSMUST00000069597 4394 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
Lsmem1Q3UQS2 Casp9-201ENSMUST00000030747 3897 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Lsmem1Q3UQS2 5830415G21Rik-201ENSMUST00000192543 1332 ntBASIC17.11■□□□□ 0.33
Lsmem1Q3UQS2 Gm27029-201ENSMUST00000107257 1898 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
Lsmem1Q3UQS2 Zfp648-201ENSMUST00000086195 1892 ntAPPRIS P1 TSL 3 BASIC17.11■□□□□ 0.33
Lsmem1Q3UQS2 Zhx1-202ENSMUST00000110168 5212 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
Lsmem1Q3UQS2 Dnajc19-201ENSMUST00000011029 2499 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Lsmem1Q3UQS2 Cdca3-201ENSMUST00000024270 1976 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Lsmem1Q3UQS2 Notch4-201ENSMUST00000015612 6591 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Lsmem1Q3UQS2 Gdf15-201ENSMUST00000003808 1545 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Lsmem1Q3UQS2 Hoxc9-201ENSMUST00000001706 2374 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Lsmem1Q3UQS2 P2rx5-201ENSMUST00000006104 2395 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Lsmem1Q3UQS2 Ocel1-203ENSMUST00000110052 5285 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Lsmem1Q3UQS2 Msx2-201ENSMUST00000021922 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Lsmem1Q3UQS2 Irak1-205ENSMUST00000114353 1896 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
Lsmem1Q3UQS2 Sult2b1-204ENSMUST00000209739 1858 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
Lsmem1Q3UQS2 Zbtb22-201ENSMUST00000053429 2611 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Lsmem1Q3UQS2 Map3k10-201ENSMUST00000036453 3682 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Lsmem1Q3UQS2 Gmcl1-202ENSMUST00000113679 960 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Lsmem1Q3UQS2 Acaa1a-203ENSMUST00000175743 1219 ntTSL 5 BASIC17.1■□□□□ 0.33
Lsmem1Q3UQS2 Acaa1a-207ENSMUST00000176397 996 ntTSL 5 BASIC17.1■□□□□ 0.33
Lsmem1Q3UQS2 Pgpep1-208ENSMUST00000211715 676 ntTSL 3 BASIC17.1■□□□□ 0.33
Lsmem1Q3UQS2 Gm18101-201ENSMUST00000215769 548 ntBASIC17.1■□□□□ 0.33
Lsmem1Q3UQS2 Ttc32-203ENSMUST00000219488 768 ntTSL 3 BASIC17.1■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 16.1 ms