Protein–RNA interactions for Protein: Q3UMB5

Smcr8, Guanine nucleotide exchange protein SMCR8, mousemouse

Predictions only

Length 935 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smcr8Q3UMB5 Nfkbib-201ENSMUST00000032815 2061 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Smcr8Q3UMB5 Tbcel-201ENSMUST00000066148 5000 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Smcr8Q3UMB5 Appl2-201ENSMUST00000020500 3020 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Smcr8Q3UMB5 Dmap1-201ENSMUST00000102687 1566 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Smcr8Q3UMB5 Klhdc8b-214ENSMUST00000195435 1612 ntTSL 5 BASIC18.17■□□□□ 0.5
Smcr8Q3UMB5 Vhl-201ENSMUST00000035673 2792 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Smcr8Q3UMB5 Bmi1-201ENSMUST00000028071 3594 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Smcr8Q3UMB5 Gm6598-201ENSMUST00000202719 2615 ntBASIC18.17■□□□□ 0.5
Smcr8Q3UMB5 Atp5g1-202ENSMUST00000107684 596 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Smcr8Q3UMB5 Rpl14-201ENSMUST00000165532 1009 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Smcr8Q3UMB5 Calu-207ENSMUST00000173216 673 ntTSL 5 BASIC18.17■□□□□ 0.5
Smcr8Q3UMB5 Gm17808-201ENSMUST00000200859 894 ntBASIC18.17■□□□□ 0.5
Smcr8Q3UMB5 Gm21057-201ENSMUST00000206022 670 ntTSL 3 BASIC18.17■□□□□ 0.5
Smcr8Q3UMB5 Iscu-201ENSMUST00000026937 957 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Smcr8Q3UMB5 Rpp25l-201ENSMUST00000038434 856 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Smcr8Q3UMB5 Fuz-201ENSMUST00000071207 1698 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Smcr8Q3UMB5 Fam171b-201ENSMUST00000051454 5614 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Smcr8Q3UMB5 Ercc6l2-203ENSMUST00000067821 2743 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
Smcr8Q3UMB5 Trip10-205ENSMUST00000224885 2136 ntAPPRIS ALT2 BASIC18.17■□□□□ 0.5
Smcr8Q3UMB5 Ppp1r3f-205ENSMUST00000150787 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Smcr8Q3UMB5 Actl10-201ENSMUST00000104928 1501 ntAPPRIS P1 BASIC18.17■□□□□ 0.5
Smcr8Q3UMB5 Actl10-202ENSMUST00000226583 1501 ntBASIC18.17■□□□□ 0.5
Smcr8Q3UMB5 Bud23-202ENSMUST00000085984 1516 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Smcr8Q3UMB5 Ngrn-201ENSMUST00000117989 1317 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Smcr8Q3UMB5 Cspg5-202ENSMUST00000196060 3790 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Smcr8Q3UMB5 Zxdc-203ENSMUST00000113539 4864 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Smcr8Q3UMB5 Gm16712-201ENSMUST00000181962 1960 ntTSL 2 BASIC18.17■□□□□ 0.5
Smcr8Q3UMB5 Gm26697-201ENSMUST00000180898 1760 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Smcr8Q3UMB5 Taf6l-211ENSMUST00000177056 2006 ntTSL 5 BASIC18.16■□□□□ 0.5
Smcr8Q3UMB5 Khsrp-201ENSMUST00000007814 3990 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Smcr8Q3UMB5 Col15a1-201ENSMUST00000082303 5102 ntAPPRIS ALT2 TSL 2 BASIC18.16■□□□□ 0.5
Smcr8Q3UMB5 Zbtb24-201ENSMUST00000080771 2844 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Smcr8Q3UMB5 Tmem131-208ENSMUST00000194563 6698 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
Smcr8Q3UMB5 Echdc2-203ENSMUST00000116307 893 ntTSL 5 BASIC18.16■□□□□ 0.5
Smcr8Q3UMB5 Utp23-204ENSMUST00000161651 582 ntTSL 5 BASIC18.16■□□□□ 0.5
Smcr8Q3UMB5 Gm27704-201ENSMUST00000185094 107 ntBASIC18.16■□□□□ 0.5
Smcr8Q3UMB5 Piga-208ENSMUST00000208697 947 ntTSL 5 BASIC18.16■□□□□ 0.5
Smcr8Q3UMB5 1700022H01Rik-201ENSMUST00000219142 387 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Smcr8Q3UMB5 Insl6-201ENSMUST00000052380 708 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Smcr8Q3UMB5 Gne-202ENSMUST00000102936 2920 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Smcr8Q3UMB5 Slc16a3-201ENSMUST00000070653 2272 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Smcr8Q3UMB5 A930017K11Rik-201ENSMUST00000162431 2539 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Smcr8Q3UMB5 Nrl-201ENSMUST00000062232 2504 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Smcr8Q3UMB5 Dscc1-201ENSMUST00000023059 1324 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Smcr8Q3UMB5 Spout1-201ENSMUST00000100220 1805 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Smcr8Q3UMB5 Slc43a1-202ENSMUST00000111624 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Smcr8Q3UMB5 2810408A11Rik-203ENSMUST00000102580 1640 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
Smcr8Q3UMB5 2810425M01Rik-201ENSMUST00000180790 1850 ntTSL 5 BASIC18.16■□□□□ 0.5
Smcr8Q3UMB5 Pcf11-201ENSMUST00000119954 5995 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Smcr8Q3UMB5 Sec1-201ENSMUST00000040636 2470 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Smcr8Q3UMB5 Dlgap4-205ENSMUST00000109567 4840 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
Smcr8Q3UMB5 Sharpin-201ENSMUST00000023211 1734 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Smcr8Q3UMB5 Gm45412-201ENSMUST00000210217 2275 ntBASIC18.15■□□□□ 0.5
Smcr8Q3UMB5 Shroom3-211ENSMUST00000225438 5742 ntBASIC18.15■□□□□ 0.5
Smcr8Q3UMB5 Gm9103-201ENSMUST00000119371 405 ntBASIC18.15■□□□□ 0.5
Smcr8Q3UMB5 Snx15-207ENSMUST00000154601 767 ntTSL 5 BASIC18.15■□□□□ 0.5
Smcr8Q3UMB5 Flt3l-206ENSMUST00000210197 834 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
Smcr8Q3UMB5 Mrpl14-201ENSMUST00000024734 645 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Smcr8Q3UMB5 Irak1bp1-201ENSMUST00000034783 1159 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Smcr8Q3UMB5 Prss40-201ENSMUST00000047840 1275 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Smcr8Q3UMB5 Taar2-201ENSMUST00000079134 1020 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Smcr8Q3UMB5 2810459M11Rik-202ENSMUST00000165824 3331 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
Smcr8Q3UMB5 Hes6-201ENSMUST00000086851 1335 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Smcr8Q3UMB5 Snrpd2-201ENSMUST00000049294 1420 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Smcr8Q3UMB5 Pkp4-202ENSMUST00000102754 4614 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
Smcr8Q3UMB5 Adam33-201ENSMUST00000052104 2795 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.5
Smcr8Q3UMB5 Mipol1-201ENSMUST00000123498 2117 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.5
Smcr8Q3UMB5 Trim45-202ENSMUST00000094048 1815 ntTSL 5 BASIC18.14■□□□□ 0.5
Smcr8Q3UMB5 Gas2-201ENSMUST00000051912 2181 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Smcr8Q3UMB5 Kmt5c-201ENSMUST00000098853 2189 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Smcr8Q3UMB5 Ocel1-203ENSMUST00000110052 5285 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Smcr8Q3UMB5 Msi2-201ENSMUST00000092794 1855 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Smcr8Q3UMB5 Actr3-202ENSMUST00000178474 2565 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Smcr8Q3UMB5 Fam104a-201ENSMUST00000120194 2619 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Smcr8Q3UMB5 Fam69a-201ENSMUST00000031198 2721 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Smcr8Q3UMB5 Gfod2-203ENSMUST00000155038 951 ntTSL 2 BASIC18.14■□□□□ 0.49
Smcr8Q3UMB5 Srgn-205ENSMUST00000162161 694 ntAPPRIS P1 TSL 3 BASIC18.14■□□□□ 0.49
Smcr8Q3UMB5 Ube2t-201ENSMUST00000027687 1116 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Smcr8Q3UMB5 4933427E11Rik-201ENSMUST00000056711 1214 ntBASIC18.14■□□□□ 0.49
Smcr8Q3UMB5 Ptgis-202ENSMUST00000088041 1711 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Smcr8Q3UMB5 Gm15635-204ENSMUST00000208024 2539 ntBASIC18.14■□□□□ 0.49
Smcr8Q3UMB5 Gcat-202ENSMUST00000171999 1763 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Smcr8Q3UMB5 Nespas-203ENSMUST00000151472 2248 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Smcr8Q3UMB5 AC154855.1-201ENSMUST00000227353 1458 ntBASIC18.14■□□□□ 0.49
Smcr8Q3UMB5 Acsl3-205ENSMUST00000142704 2976 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Smcr8Q3UMB5 B3gnt9-202ENSMUST00000136822 2516 ntAPPRIS P1 BASIC18.13■□□□□ 0.49
Smcr8Q3UMB5 Prmt2-202ENSMUST00000099571 2052 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
Smcr8Q3UMB5 Misp-205ENSMUST00000219305 2569 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Smcr8Q3UMB5 Klf14-201ENSMUST00000101589 3056 ntAPPRIS P1 BASIC18.13■□□□□ 0.49
Smcr8Q3UMB5 AC154231.1-201ENSMUST00000220564 2175 ntBASIC18.13■□□□□ 0.49
Smcr8Q3UMB5 Best2-203ENSMUST00000209421 2212 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Smcr8Q3UMB5 Ppm1b-202ENSMUST00000112304 3262 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
Smcr8Q3UMB5 Sh2b2-203ENSMUST00000196397 2797 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Smcr8Q3UMB5 Vkorc1l1-203ENSMUST00000201855 4809 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Smcr8Q3UMB5 4930505N22Rik-201ENSMUST00000181820 945 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Smcr8Q3UMB5 Tctex1d4-201ENSMUST00000062206 990 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Smcr8Q3UMB5 Fbxo36-201ENSMUST00000097672 901 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Smcr8Q3UMB5 Usp48-201ENSMUST00000055131 5722 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Smcr8Q3UMB5 Mycn-202ENSMUST00000130990 2522 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Smcr8Q3UMB5 Apbb1-209ENSMUST00000188368 1970 ntTSL 5 BASIC18.13■□□□□ 0.49
Retrieved 100 of 76,532 protein–RNA pairs in 32.3 ms