Protein–RNA interactions for Protein: P97334

Nkx2-3, Homeobox protein Nkx-2.3, mousemouse

Predictions only

Length 362 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-3P97334 Erich2-203ENSMUST00000134607 1659 ntAPPRIS ALT2 TSL 5 BASIC21.31■■□□□ 1
Nkx2-3P97334 Tox2-205ENSMUST00000165937 1675 ntAPPRIS P2 TSL 5 BASIC21.31■■□□□ 1
Nkx2-3P97334 Mfsd10-203ENSMUST00000114331 1754 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Nkx2-3P97334 B3gnt9-202ENSMUST00000136822 2516 ntAPPRIS P1 BASIC21.3■■□□□ 1
Nkx2-3P97334 Haghl-201ENSMUST00000077938 1405 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Nkx2-3P97334 Shd-201ENSMUST00000044216 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC21.3■■□□□ 1
Nkx2-3P97334 Sec14l1-203ENSMUST00000103026 2589 ntAPPRIS ALT2 TSL 5 BASIC21.3■■□□□ 1
Nkx2-3P97334 Gm13312-201ENSMUST00000119631 718 ntBASIC21.3■■□□□ 1
Nkx2-3P97334 Lhx1os-201ENSMUST00000126072 589 ntTSL 3 BASIC21.3■■□□□ 1
Nkx2-3P97334 Dcdc2c-201ENSMUST00000020963 1041 ntTSL 5 BASIC21.3■■□□□ 1
Nkx2-3P97334 AC160338.1-201ENSMUST00000214232 705 ntBASIC21.3■■□□□ 1
Nkx2-3P97334 Rhoc-201ENSMUST00000002303 1202 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Nkx2-3P97334 Psmg3-201ENSMUST00000031531 883 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Nkx2-3P97334 Abcc5-203ENSMUST00000096199 1136 ntTSL 1 (best) BASIC21.3■■□□□ 1
Nkx2-3P97334 Nsun5-201ENSMUST00000000940 2243 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Nkx2-3P97334 Fam3a-206ENSMUST00000114143 1899 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Nkx2-3P97334 Klc1-202ENSMUST00000118471 2272 ntTSL 1 (best) BASIC21.3■■□□□ 1
Nkx2-3P97334 A930012L18Rik-201ENSMUST00000181094 2364 ntTSL 1 (best) BASIC21.3■■□□□ 1
Nkx2-3P97334 Plekhf2-201ENSMUST00000054776 2977 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Nkx2-3P97334 Otub1-202ENSMUST00000123594 1728 ntTSL 5 BASIC21.29■■□□□ 1
Nkx2-3P97334 Erc1-202ENSMUST00000079582 2304 ntTSL 1 (best) BASIC21.29■■□□□ 1
Nkx2-3P97334 Kmt5c-201ENSMUST00000098853 2189 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Nkx2-3P97334 Cnnm1-201ENSMUST00000165311 5037 ntAPPRIS P2 TSL 1 (best) BASIC21.29■■□□□ 1
Nkx2-3P97334 Rpf1-201ENSMUST00000029838 1661 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Nkx2-3P97334 2210408F21Rik-212ENSMUST00000152157 490 ntTSL 2 BASIC21.29■■□□□ 1
Nkx2-3P97334 AC159301.1-201ENSMUST00000225130 1182 ntBASIC21.29■■□□□ 1
Nkx2-3P97334 Ndufb10-201ENSMUST00000045602 732 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Nkx2-3P97334 Sirt1-202ENSMUST00000105442 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
Nkx2-3P97334 Asnsd1-201ENSMUST00000027264 2442 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Nkx2-3P97334 Trap1-201ENSMUST00000006137 2320 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Nkx2-3P97334 Nrn1-201ENSMUST00000037623 1619 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Nkx2-3P97334 Rcn1-201ENSMUST00000006128 2720 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Nkx2-3P97334 Smu1-201ENSMUST00000030117 2418 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Nkx2-3P97334 Rbm12b1-202ENSMUST00000069128 3069 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Nkx2-3P97334 Spats2l-212ENSMUST00000170139 2315 ntAPPRIS P1 TSL 5 BASIC21.28■■□□□ 1
Nkx2-3P97334 Tnnt2-205ENSMUST00000178204 1172 ntAPPRIS ALT2 TSL 5 BASIC21.28■■□□□ 1
Nkx2-3P97334 Tnnt2-207ENSMUST00000179863 1097 ntAPPRIS P4 TSL 5 BASIC21.28■■□□□ 1
Nkx2-3P97334 Tnnt2-209ENSMUST00000188028 1200 ntAPPRIS P4 TSL 5 BASIC21.28■■□□□ 1
Nkx2-3P97334 Spata33-204ENSMUST00000212346 715 ntTSL 2 BASIC21.28■■□□□ 1
Nkx2-3P97334 Tmod1-201ENSMUST00000107773 3158 ntAPPRIS P1 TSL 5 BASIC21.28■■□□□ 1
Nkx2-3P97334 9430097D07Rik-201ENSMUST00000100190 1501 ntAPPRIS P1 BASIC21.28■■□□□ 1
Nkx2-3P97334 Cep83-201ENSMUST00000020212 3639 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Nkx2-3P97334 Mettl21a-202ENSMUST00000114079 2030 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Nkx2-3P97334 Gm42417-201ENSMUST00000191849 2256 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Nkx2-3P97334 Map6-206ENSMUST00000208605 2275 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■■□□□ 1
Nkx2-3P97334 Med9-201ENSMUST00000081980 1920 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Nkx2-3P97334 Atf7-209ENSMUST00000184485 2523 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Nkx2-3P97334 Pisd-201ENSMUST00000061895 2183 ntAPPRIS P3 TSL 1 (best) BASIC21.27■■□□□ 1
Nkx2-3P97334 Enoph1-202ENSMUST00000169390 1833 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Nkx2-3P97334 Blmh-201ENSMUST00000021197 2497 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Nkx2-3P97334 Gm15234-201ENSMUST00000141485 1058 ntTSL 1 (best) BASIC21.27■■□□□ 1
Nkx2-3P97334 Gm44357-201ENSMUST00000195897 142 ntBASIC21.27■■□□□ 1
Nkx2-3P97334 Gm19658-201ENSMUST00000196231 138 ntBASIC21.27■■□□□ 1
Nkx2-3P97334 Gm44367-201ENSMUST00000196836 138 ntBASIC21.27■■□□□ 1
Nkx2-3P97334 Gm44350-201ENSMUST00000197197 138 ntBASIC21.27■■□□□ 1
Nkx2-3P97334 Gm44390-201ENSMUST00000197533 144 ntBASIC21.27■■□□□ 1
Nkx2-3P97334 Gm44313-201ENSMUST00000198018 138 ntBASIC21.27■■□□□ 1
Nkx2-3P97334 Gm44486-201ENSMUST00000198508 138 ntBASIC21.27■■□□□ 1
Nkx2-3P97334 Gm44454-201ENSMUST00000198541 138 ntBASIC21.27■■□□□ 1
Nkx2-3P97334 Gm44314-201ENSMUST00000199263 138 ntBASIC21.27■■□□□ 1
Nkx2-3P97334 Gm44394-201ENSMUST00000199558 138 ntBASIC21.27■■□□□ 1
Nkx2-3P97334 Gm44484-201ENSMUST00000199873 138 ntBASIC21.27■■□□□ 1
Nkx2-3P97334 Gm44466-201ENSMUST00000200264 138 ntBASIC21.27■■□□□ 1
Nkx2-3P97334 Gm44359-201ENSMUST00000200671 138 ntBASIC21.27■■□□□ 1
Nkx2-3P97334 Zfp747-202ENSMUST00000205832 618 ntTSL 3 BASIC21.27■■□□□ 1
Nkx2-3P97334 Gm6296-201ENSMUST00000222599 943 ntBASIC21.27■■□□□ 1
Nkx2-3P97334 4930451I11Rik-201ENSMUST00000061695 481 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Nkx2-3P97334 Gm15442-201ENSMUST00000117905 1527 ntBASIC21.27■■□□□ 1
Nkx2-3P97334 Ssx2ip-204ENSMUST00000106153 3446 ntAPPRIS P3 TSL 1 (best) BASIC21.27■■□□□ 1
Nkx2-3P97334 Rbpms2-201ENSMUST00000055844 1987 ntAPPRIS P2 TSL 1 (best) BASIC21.27■□□□□ 0.99
Nkx2-3P97334 Osbpl1a-203ENSMUST00000118313 2893 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Nkx2-3P97334 Senp6-201ENSMUST00000037484 5111 ntAPPRIS P3 TSL 1 (best) BASIC21.26■□□□□ 0.99
Nkx2-3P97334 Cog2-201ENSMUST00000034460 2825 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Nkx2-3P97334 Slc35b2-202ENSMUST00000223987 1766 ntBASIC21.26■□□□□ 0.99
Nkx2-3P97334 Rhox13-201ENSMUST00000152730 876 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Nkx2-3P97334 Hint3-203ENSMUST00000161074 875 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Nkx2-3P97334 Smarca5-ps-202ENSMUST00000171805 1284 ntBASIC21.26■□□□□ 0.99
Nkx2-3P97334 Gm27525-201ENSMUST00000184465 107 ntBASIC21.26■□□□□ 0.99
Nkx2-3P97334 Olfr572-203ENSMUST00000215782 1233 ntAPPRIS P1 TSL 5 BASIC21.26■□□□□ 0.99
Nkx2-3P97334 Olfr571-201ENSMUST00000061738 969 ntAPPRIS P1 BASIC21.26■□□□□ 0.99
Nkx2-3P97334 Tfeb-203ENSMUST00000113284 1974 ntTSL 5 BASIC21.26■□□□□ 0.99
Nkx2-3P97334 Ing1-202ENSMUST00000209565 1971 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Nkx2-3P97334 Jdp2-202ENSMUST00000171754 1559 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Nkx2-3P97334 Arhgef9-208ENSMUST00000128565 2285 ntTSL 5 BASIC21.26■□□□□ 0.99
Nkx2-3P97334 Gm16638-201ENSMUST00000148687 1865 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Nkx2-3P97334 Acadvl-201ENSMUST00000018718 2020 ntAPPRIS ALT2 TSL 5 BASIC21.26■□□□□ 0.99
Nkx2-3P97334 Slc6a8-206ENSMUST00000164449 2151 ntTSL 5 BASIC21.26■□□□□ 0.99
Nkx2-3P97334 Ndufaf3-201ENSMUST00000074208 1487 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Nkx2-3P97334 Ubp1-201ENSMUST00000009885 3742 ntAPPRIS ALT1 TSL 5 BASIC21.26■□□□□ 0.99
Nkx2-3P97334 Dtnb-222ENSMUST00000174479 3689 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Nkx2-3P97334 Nnat-202ENSMUST00000109526 1213 ntAPPRIS P4 TSL 1 (best) BASIC21.25■□□□□ 0.99
Nkx2-3P97334 1700020A23Rik-202ENSMUST00000110281 521 ntAPPRIS P1 TSL 3 BASIC21.25■□□□□ 0.99
Nkx2-3P97334 Pacsin1-204ENSMUST00000114873 1857 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Nkx2-3P97334 Gm12644-201ENSMUST00000119935 606 ntBASIC21.25■□□□□ 0.99
Nkx2-3P97334 Dvl3-204ENSMUST00000171774 2319 ntTSL 5 BASIC21.25■□□□□ 0.99
Nkx2-3P97334 Nmu-201ENSMUST00000031146 828 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Nkx2-3P97334 Gm29514-202ENSMUST00000186665 2214 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Nkx2-3P97334 Apbb1-205ENSMUST00000187057 1630 ntTSL 5 BASIC21.25■□□□□ 0.99
Nkx2-3P97334 Dhx15-201ENSMUST00000031061 3010 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Nkx2-3P97334 Mfsd13a-202ENSMUST00000128041 2223 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Retrieved 100 of 76,532 protein–RNA pairs in 21.4 ms