Protein–RNA interactions for Protein: P70662

Ldb1, LIM domain-binding protein 1, mousemouse

Predictions only

Length 411 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ldb1P70662 D330020A13Rik-201ENSMUST00000181956 1069 ntAPPRIS P1 BASIC16.84■□□□□ 0.29
Ldb1P70662 Gm28876-201ENSMUST00000188137 703 ntTSL 3 BASIC16.84■□□□□ 0.29
Ldb1P70662 Gm21814-202ENSMUST00000203277 873 ntBASIC16.84■□□□□ 0.29
Ldb1P70662 Stard10-211ENSMUST00000210192 1258 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
Ldb1P70662 Odf3b-204ENSMUST00000227834 930 ntBASIC16.84■□□□□ 0.29
Ldb1P70662 Fgfr1op2-202ENSMUST00000058245 918 ntTSL 2 BASIC16.84■□□□□ 0.29
Ldb1P70662 Mirt1-201ENSMUST00000180489 5292 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Ldb1P70662 Gm45774-201ENSMUST00000211992 2665 ntBASIC16.84■□□□□ 0.29
Ldb1P70662 Cwh43-201ENSMUST00000031040 2716 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Ldb1P70662 Dap-201ENSMUST00000044524 1555 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Ldb1P70662 Rhot2-201ENSMUST00000043897 3189 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Ldb1P70662 Tnfrsf25-201ENSMUST00000025706 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Ldb1P70662 Zdhhc2-201ENSMUST00000049389 3381 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Ldb1P70662 Prmt2-202ENSMUST00000099571 2052 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
Ldb1P70662 Cmtm4-201ENSMUST00000179802 7734 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Ldb1P70662 Lsm1-201ENSMUST00000038421 2663 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
Ldb1P70662 Lrch3-203ENSMUST00000135193 2794 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.29
Ldb1P70662 Pacs2-202ENSMUST00000220541 3101 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.29
Ldb1P70662 Ncoa5-201ENSMUST00000040381 3179 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
Ldb1P70662 Psip1-201ENSMUST00000030207 3251 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
Ldb1P70662 Usp6nl-202ENSMUST00000114937 7484 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Ldb1P70662 Atf7ip2-204ENSMUST00000119023 1048 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Ldb1P70662 Shroom3-204ENSMUST00000168878 5630 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Ldb1P70662 Slc25a41-202ENSMUST00000169012 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Ldb1P70662 Gm2479-201ENSMUST00000173312 1053 ntTSL 3 BASIC16.83■□□□□ 0.28
Ldb1P70662 Gm26596-201ENSMUST00000180464 2655 ntBASIC16.83■□□□□ 0.28
Ldb1P70662 Gm9484-201ENSMUST00000195892 1159 ntBASIC16.83■□□□□ 0.28
Ldb1P70662 AC120002.2-201ENSMUST00000220205 773 ntBASIC16.83■□□□□ 0.28
Ldb1P70662 Nudt16-201ENSMUST00000035179 1631 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Ldb1P70662 Cyb561d2-201ENSMUST00000041459 1786 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Ldb1P70662 Pfdn4-201ENSMUST00000063682 935 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Ldb1P70662 Rnf103-201ENSMUST00000064637 3264 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Ldb1P70662 Cdc42ep3-201ENSMUST00000068958 1967 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Ldb1P70662 Mink1-202ENSMUST00000072873 4610 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
Ldb1P70662 Gm5417-201ENSMUST00000079706 384 ntBASIC16.83■□□□□ 0.28
Ldb1P70662 Gzmd-201ENSMUST00000082093 964 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Ldb1P70662 Fxyd6-201ENSMUST00000085939 1788 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Ldb1P70662 Fam171b-201ENSMUST00000051454 5614 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Ldb1P70662 Stk35-202ENSMUST00000166282 5445 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Ldb1P70662 Mepce-201ENSMUST00000031740 3128 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Ldb1P70662 Slc38a10-202ENSMUST00000053692 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Ldb1P70662 March3-202ENSMUST00000102912 1754 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Ldb1P70662 Gm26592-201ENSMUST00000180870 1730 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Ldb1P70662 Cul1-201ENSMUST00000031697 3161 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Ldb1P70662 Rab35-201ENSMUST00000031492 2820 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Ldb1P70662 Zfp326-201ENSMUST00000031227 2667 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Ldb1P70662 Gm17098-201ENSMUST00000166507 628 ntTSL 5 BASIC16.82■□□□□ 0.28
Ldb1P70662 Sct-202ENSMUST00000167790 507 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
Ldb1P70662 Anapc13-203ENSMUST00000188398 727 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
Ldb1P70662 AC124601.2-201ENSMUST00000222888 759 ntTSL 2 BASIC16.82■□□□□ 0.28
Ldb1P70662 Krt88-201ENSMUST00000023781 903 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Ldb1P70662 Sct-201ENSMUST00000046156 534 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Ldb1P70662 Lsm10-201ENSMUST00000055575 943 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Ldb1P70662 Sco1-201ENSMUST00000092996 2412 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Ldb1P70662 Lrrc36-206ENSMUST00000216765 2301 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
Ldb1P70662 Mst1-204ENSMUST00000162886 2209 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
Ldb1P70662 Gm17055-201ENSMUST00000166951 2232 ntTSL 5 BASIC16.82■□□□□ 0.28
Ldb1P70662 Snx11-202ENSMUST00000107661 2197 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Ldb1P70662 Sytl3-201ENSMUST00000097430 2100 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Ldb1P70662 Ino80e-203ENSMUST00000106343 1973 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Ldb1P70662 BC051019-202ENSMUST00000106735 1957 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Ldb1P70662 Avl9-201ENSMUST00000031805 6670 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Ldb1P70662 Fhl1-203ENSMUST00000114769 2770 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Ldb1P70662 Ube2i-207ENSMUST00000172868 2755 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Ldb1P70662 Dnajb2-208ENSMUST00000188346 1823 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Ldb1P70662 Gprc5b-201ENSMUST00000008878 4518 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
Ldb1P70662 Napa-201ENSMUST00000006181 2517 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Ldb1P70662 Prss53-202ENSMUST00000205300 1662 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Ldb1P70662 Tnfrsf25-202ENSMUST00000035275 1603 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
Ldb1P70662 1700096K18Rik-201ENSMUST00000188465 1454 ntBASIC16.81■□□□□ 0.28
Ldb1P70662 Dph1-201ENSMUST00000044949 2139 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Ldb1P70662 4933428P19Rik-201ENSMUST00000199616 1376 ntBASIC16.81■□□□□ 0.28
Ldb1P70662 Tmed3-201ENSMUST00000058488 1346 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Ldb1P70662 Rbpms2-201ENSMUST00000055844 1987 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Ldb1P70662 Tmem205-201ENSMUST00000046831 785 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Ldb1P70662 Crb3-202ENSMUST00000097299 1206 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
Ldb1P70662 Lhfpl4-201ENSMUST00000162280 4762 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Ldb1P70662 Tox2-205ENSMUST00000165937 1675 ntAPPRIS P2 TSL 5 BASIC16.81■□□□□ 0.28
Ldb1P70662 Mtif3-201ENSMUST00000016654 2131 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Ldb1P70662 Trim14-202ENSMUST00000102924 1582 ntTSL 2 BASIC16.81■□□□□ 0.28
Ldb1P70662 C130026I21Rik-201ENSMUST00000064341 1561 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
Ldb1P70662 Cog6-204ENSMUST00000193432 2078 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Ldb1P70662 Bicdl1-201ENSMUST00000055408 3026 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Ldb1P70662 Seh1l-201ENSMUST00000025421 3516 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Ldb1P70662 Ctsf-201ENSMUST00000119694 1975 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Ldb1P70662 Zmiz1-201ENSMUST00000007961 5397 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Ldb1P70662 Sarm1-202ENSMUST00000108287 4868 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Ldb1P70662 AL590614.2-201ENSMUST00000225374 1937 ntBASIC16.8■□□□□ 0.28
Ldb1P70662 Gm27029-201ENSMUST00000107257 1898 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
Ldb1P70662 Tekt1-203ENSMUST00000108503 1397 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Ldb1P70662 Shroom3-201ENSMUST00000113051 6435 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Ldb1P70662 Gm13647-201ENSMUST00000154654 622 ntTSL 5 BASIC16.8■□□□□ 0.28
Ldb1P70662 Steap1-201ENSMUST00000015796 1230 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Ldb1P70662 Gng2-202ENSMUST00000159028 458 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
Ldb1P70662 Gm27000-201ENSMUST00000182943 842 ntBASIC16.8■□□□□ 0.28
Ldb1P70662 Cib1-207ENSMUST00000206084 772 ntTSL 3 BASIC16.8■□□□□ 0.28
Ldb1P70662 Il3ra-202ENSMUST00000223589 738 ntBASIC16.8■□□□□ 0.28
Ldb1P70662 Cib1-202ENSMUST00000071457 702 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Ldb1P70662 Gm8994-201ENSMUST00000077886 1236 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
Ldb1P70662 Fez2-202ENSMUST00000112487 2020 ntAPPRIS ALT1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 69.7 ms