Protein–RNA interactions for Protein: P54254

Atxn1, Ataxin-1, mousemouse

Predictions only

Length 791 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atxn1P54254 Pard3-209ENSMUST00000160272 5815 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Atxn1P54254 Eme2-202ENSMUST00000121542 1521 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Atxn1P54254 Lsm6-201ENSMUST00000051867 2107 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Atxn1P54254 Foxo3-204ENSMUST00000175881 2535 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Atxn1P54254 Hnrnph3-201ENSMUST00000020263 2213 ntAPPRIS P3 TSL 5 BASIC16.74■□□□□ 0.27
Atxn1P54254 Kcns2-201ENSMUST00000072868 5456 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Atxn1P54254 Bmt2-201ENSMUST00000045235 4143 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Atxn1P54254 Zbtb8a-201ENSMUST00000030610 2321 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Atxn1P54254 Camk2d-228ENSMUST00000200171 5396 ntTSL 5 BASIC16.74■□□□□ 0.27
Atxn1P54254 Cyp26c1-201ENSMUST00000073391 1747 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Atxn1P54254 Prkci-201ENSMUST00000108249 4708 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Atxn1P54254 Hmgb3-202ENSMUST00000072699 1571 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Atxn1P54254 Gm12895-201ENSMUST00000122214 226 ntBASIC16.74■□□□□ 0.27
Atxn1P54254 Smim4-204ENSMUST00000203261 1219 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Atxn1P54254 Gm9731-201ENSMUST00000209480 747 ntBASIC16.74■□□□□ 0.27
Atxn1P54254 Il3ra-202ENSMUST00000223589 738 ntBASIC16.74■□□□□ 0.27
Atxn1P54254 Pdrg1-201ENSMUST00000028972 1273 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Atxn1P54254 Smarca4-202ENSMUST00000098948 6376 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Atxn1P54254 Chst1-201ENSMUST00000065797 2680 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Atxn1P54254 Lyrm4-201ENSMUST00000053265 2086 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Atxn1P54254 AC163637.2-201ENSMUST00000213826 1945 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
Atxn1P54254 Gm6190-201ENSMUST00000220683 1374 ntBASIC16.74■□□□□ 0.27
Atxn1P54254 Ppm1b-202ENSMUST00000112304 3262 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
Atxn1P54254 Ncmap-205ENSMUST00000105860 2000 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Atxn1P54254 St3gal2-201ENSMUST00000034197 4396 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Atxn1P54254 Igdcc4-205ENSMUST00000213533 6220 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Atxn1P54254 Igdcc4-201ENSMUST00000035499 6223 ntAPPRIS P2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Atxn1P54254 Pik3r2-201ENSMUST00000034296 3165 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Atxn1P54254 Ptpre-207ENSMUST00000211140 5753 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
Atxn1P54254 Sqor-201ENSMUST00000005953 1804 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Atxn1P54254 Tsks-201ENSMUST00000080233 1806 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
Atxn1P54254 Rfesd-203ENSMUST00000179078 1436 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Atxn1P54254 Letm1-201ENSMUST00000005431 5272 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Atxn1P54254 Thumpd3-201ENSMUST00000032398 2163 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Atxn1P54254 Tbc1d13-201ENSMUST00000044556 3595 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Atxn1P54254 Mansc4-201ENSMUST00000100780 1125 ntAPPRIS P2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Atxn1P54254 Dnajc24-201ENSMUST00000102555 1197 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Atxn1P54254 Nat9-203ENSMUST00000103040 1204 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Atxn1P54254 Nat9-204ENSMUST00000103041 953 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
Atxn1P54254 Gm7063-201ENSMUST00000186840 981 ntBASIC16.73■□□□□ 0.27
Atxn1P54254 Rpsa-ps1-201ENSMUST00000191040 886 ntBASIC16.73■□□□□ 0.27
Atxn1P54254 3110040N11Rik-201ENSMUST00000026092 887 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Atxn1P54254 1700037H04Rik-201ENSMUST00000028800 832 ntAPPRIS ALT1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Atxn1P54254 Eif6-201ENSMUST00000029142 1500 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Atxn1P54254 Gm37194-201ENSMUST00000193092 3031 ntBASIC16.73■□□□□ 0.27
Atxn1P54254 Pla2g2c-201ENSMUST00000030530 1618 ntAPPRIS P1 TSL 3 BASIC16.73■□□□□ 0.27
Atxn1P54254 Gm29514-202ENSMUST00000186665 2214 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Atxn1P54254 Dus3l-201ENSMUST00000007747 2303 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Atxn1P54254 Rnf112-202ENSMUST00000060255 3161 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Atxn1P54254 U2af2-202ENSMUST00000165399 1810 ntTSL 5 BASIC16.73■□□□□ 0.27
Atxn1P54254 Stox1-202ENSMUST00000133371 3510 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Atxn1P54254 Avl9-201ENSMUST00000031805 6670 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Atxn1P54254 Cldn7-201ENSMUST00000018713 1335 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Atxn1P54254 Tpd52l1-201ENSMUST00000000305 1308 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Atxn1P54254 Nrl-201ENSMUST00000062232 2504 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Atxn1P54254 Ckap4-202ENSMUST00000167671 2606 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Atxn1P54254 Fcho2-208ENSMUST00000224992 2964 ntBASIC16.72■□□□□ 0.27
Atxn1P54254 Otud5-201ENSMUST00000033494 4259 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
Atxn1P54254 Trmo-201ENSMUST00000030015 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Atxn1P54254 Atxn7l2-202ENSMUST00000117409 2321 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
Atxn1P54254 Ankle1-202ENSMUST00000120725 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Atxn1P54254 Gm10418-201ENSMUST00000100943 576 ntBASIC16.72■□□□□ 0.27
Atxn1P54254 Chchd7-205ENSMUST00000120732 711 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Atxn1P54254 Hnrnpa1l2-ps-201ENSMUST00000129154 964 ntBASIC16.72■□□□□ 0.27
Atxn1P54254 Bag2-203ENSMUST00000187602 378 ntTSL 2 BASIC16.72■□□□□ 0.27
Atxn1P54254 Nudt21-204ENSMUST00000212981 1184 ntTSL 3 BASIC16.72■□□□□ 0.27
Atxn1P54254 AC156576.2-201ENSMUST00000222752 503 ntTSL 5 BASIC16.72■□□□□ 0.27
Atxn1P54254 AC154621.1-201ENSMUST00000226155 1119 ntBASIC16.72■□□□□ 0.27
Atxn1P54254 Fbxo36-201ENSMUST00000097672 901 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Atxn1P54254 Adgrv1-207ENSMUST00000128585 2580 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Atxn1P54254 Retreg1-201ENSMUST00000022881 3248 ntTSL 5 BASIC16.72■□□□□ 0.27
Atxn1P54254 Krt80-201ENSMUST00000077196 1774 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Atxn1P54254 Gnao1-201ENSMUST00000034198 2948 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Atxn1P54254 Hspa1l-201ENSMUST00000007248 2472 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Atxn1P54254 Stxbp5-209ENSMUST00000141722 4702 ntAPPRIS P2 TSL 5 BASIC16.71■□□□□ 0.27
Atxn1P54254 2310009B15Rik-201ENSMUST00000112025 565 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.27
Atxn1P54254 Gm13401-201ENSMUST00000117074 291 ntBASIC16.71■□□□□ 0.27
Atxn1P54254 Tmed5-204ENSMUST00000118036 1045 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Atxn1P54254 Gm11594-201ENSMUST00000122313 162 ntBASIC16.71■□□□□ 0.27
Atxn1P54254 Polr2m-202ENSMUST00000163972 2138 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Atxn1P54254 Gm40457-201ENSMUST00000205319 1174 ntTSL 5 BASIC16.71■□□□□ 0.27
Atxn1P54254 AC120002.2-201ENSMUST00000220205 773 ntBASIC16.71■□□□□ 0.27
Atxn1P54254 Rln3-201ENSMUST00000061923 634 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Atxn1P54254 4930431F12Rik-201ENSMUST00000079389 429 ntTSL 5 BASIC16.71■□□□□ 0.27
Atxn1P54254 Gm5145-201ENSMUST00000095633 837 ntAPPRIS P1 BASIC16.71■□□□□ 0.27
Atxn1P54254 Lancl2-201ENSMUST00000050077 2509 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Atxn1P54254 Tgds-204ENSMUST00000228543 1594 ntBASIC16.71■□□□□ 0.27
Atxn1P54254 Icmt-201ENSMUST00000048892 4919 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Atxn1P54254 Sapcd2-202ENSMUST00000100323 1761 ntAPPRIS ALT2 TSL 2 BASIC16.71■□□□□ 0.27
Atxn1P54254 Fgf4-201ENSMUST00000060336 3030 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Atxn1P54254 Kat2b-ps-201ENSMUST00000128468 2490 ntBASIC16.71■□□□□ 0.26
Atxn1P54254 Sh2b2-203ENSMUST00000196397 2797 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
Atxn1P54254 Tmem8-201ENSMUST00000025010 3464 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
Atxn1P54254 Tdrd12-201ENSMUST00000032701 1620 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Atxn1P54254 Cyp2r1-201ENSMUST00000032908 1627 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Atxn1P54254 Snx14-205ENSMUST00000173011 2238 ntTSL 5 BASIC16.7■□□□□ 0.26
Atxn1P54254 Rab40c-207ENSMUST00000167626 2506 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Atxn1P54254 Six3-203ENSMUST00000176081 3680 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Atxn1P54254 Bean1-203ENSMUST00000167633 3275 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
Atxn1P54254 Dcaf8-206ENSMUST00000192704 2859 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Retrieved 100 of 76,532 protein–RNA pairs in 35.7 ms