Protein–RNA interactions for Protein: P39038

Cdh4, Cadherin-4, mousemouse

Predictions only

Length 913 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh4P39038 Gm13836-201ENSMUST00000121159 501 ntBASIC16.19■□□□□ 0.18
Cdh4P39038 Gm44924-201ENSMUST00000138087 421 ntTSL 3 BASIC16.19■□□□□ 0.18
Cdh4P39038 2210408F21Rik-208ENSMUST00000144612 450 ntTSL 3 BASIC16.19■□□□□ 0.18
Cdh4P39038 Gm18958-201ENSMUST00000174258 762 ntBASIC16.19■□□□□ 0.18
Cdh4P39038 Mir5130-201ENSMUST00000175160 84 ntBASIC16.19■□□□□ 0.18
Cdh4P39038 Map3k10-202ENSMUST00000108341 3403 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
Cdh4P39038 4930474N05Rik-203ENSMUST00000226305 2313 ntAPPRIS P1 BASIC16.19■□□□□ 0.18
Cdh4P39038 Gne-202ENSMUST00000102936 2920 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Cdh4P39038 Msl1-204ENSMUST00000107487 2836 ntAPPRIS ALT2 TSL 2 BASIC16.18■□□□□ 0.18
Cdh4P39038 Map3k7cl-201ENSMUST00000026700 1652 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Cdh4P39038 Fam57b-201ENSMUST00000079423 2328 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Cdh4P39038 Gm37519-201ENSMUST00000191687 2210 ntBASIC16.18■□□□□ 0.18
Cdh4P39038 Foxp4-204ENSMUST00000113265 3999 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Cdh4P39038 Ptges3l-202ENSMUST00000103102 1463 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Cdh4P39038 Pitpnm1-201ENSMUST00000049658 4206 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Cdh4P39038 Cadm1-204ENSMUST00000114548 4482 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Cdh4P39038 Kif5b-201ENSMUST00000025083 6032 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Cdh4P39038 Tmem80-202ENSMUST00000126510 959 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
Cdh4P39038 Gm16731-201ENSMUST00000132432 922 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Cdh4P39038 Spata25-201ENSMUST00000017911 786 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Cdh4P39038 Gm26709-202ENSMUST00000223049 819 ntTSL 5 BASIC16.18■□□□□ 0.18
Cdh4P39038 Cldn22-201ENSMUST00000038693 995 ntAPPRIS P1 BASIC16.18■□□□□ 0.18
Cdh4P39038 Ffar3-201ENSMUST00000094583 1625 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Cdh4P39038 Amigo2-201ENSMUST00000053106 2871 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Cdh4P39038 Gm20604-201ENSMUST00000174651 2795 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
Cdh4P39038 Arhgef25-212ENSMUST00000222006 1896 ntTSL 5 BASIC16.18■□□□□ 0.18
Cdh4P39038 Hoxd4-201ENSMUST00000047904 2560 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
Cdh4P39038 Ankrd22-201ENSMUST00000025686 1766 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Cdh4P39038 Cnksr2-201ENSMUST00000026750 5738 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Cdh4P39038 Haus8-201ENSMUST00000035960 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Cdh4P39038 Acot1-201ENSMUST00000168120 2272 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Cdh4P39038 Adgrl1-201ENSMUST00000045393 5643 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
Cdh4P39038 Gm43808-201ENSMUST00000202534 2065 ntBASIC16.17■□□□□ 0.18
Cdh4P39038 Prmt2-202ENSMUST00000099571 2052 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
Cdh4P39038 Il1rn-201ENSMUST00000114482 1986 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Cdh4P39038 Plppr3-207ENSMUST00000167250 3063 ntAPPRIS ALT2 TSL 2 BASIC16.17■□□□□ 0.18
Cdh4P39038 Vrk2-201ENSMUST00000078362 1889 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Cdh4P39038 Spdya-202ENSMUST00000124001 1247 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Cdh4P39038 Pabpc1l2b-ps-201ENSMUST00000124538 690 ntBASIC16.17■□□□□ 0.18
Cdh4P39038 4930405A21Rik-202ENSMUST00000139042 994 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Cdh4P39038 H2afz-207ENSMUST00000174561 810 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Cdh4P39038 Cenps-207ENSMUST00000177408 689 ntTSL 2 BASIC16.17■□□□□ 0.18
Cdh4P39038 Flg-203ENSMUST00000178695 777 ntAPPRIS P5 BASIC16.17■□□□□ 0.18
Cdh4P39038 Gm45442-201ENSMUST00000210038 411 ntTSL 3 BASIC16.17■□□□□ 0.18
Cdh4P39038 Atp23-201ENSMUST00000026504 903 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Cdh4P39038 Rgmb-201ENSMUST00000170578 2633 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Cdh4P39038 Gabpa-201ENSMUST00000009120 4987 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Cdh4P39038 She-201ENSMUST00000050401 5733 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Cdh4P39038 Ikzf1-203ENSMUST00000065433 4697 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
Cdh4P39038 Spout1-201ENSMUST00000100220 1805 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Cdh4P39038 Ptprt-201ENSMUST00000109441 6623 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Cdh4P39038 Aifm1-201ENSMUST00000037349 2237 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
Cdh4P39038 Ckap4-202ENSMUST00000167671 2606 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Cdh4P39038 Gm6598-201ENSMUST00000202719 2615 ntBASIC16.16■□□□□ 0.18
Cdh4P39038 Sart3-201ENSMUST00000019118 4447 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Cdh4P39038 Adat2-201ENSMUST00000019944 1466 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Cdh4P39038 Alg5-201ENSMUST00000044567 1471 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Cdh4P39038 Tigd3-201ENSMUST00000055911 2114 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Cdh4P39038 Stambpl1-201ENSMUST00000054956 2024 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Cdh4P39038 Acvr2a-201ENSMUST00000063886 5686 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Cdh4P39038 Sarm1-202ENSMUST00000108287 4868 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Cdh4P39038 Hmga1-206ENSMUST00000119486 1003 ntAPPRIS P3 TSL 2 BASIC16.16■□□□□ 0.18
Cdh4P39038 Muc2-203ENSMUST00000179227 399 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Cdh4P39038 4930579K19Rik-202ENSMUST00000190541 632 ntTSL 2 BASIC16.16■□□□□ 0.18
Cdh4P39038 Gm29994-201ENSMUST00000195495 1193 ntBASIC16.16■□□□□ 0.18
Cdh4P39038 Arpc4-204ENSMUST00000204802 794 ntTSL 3 BASIC16.16■□□□□ 0.18
Cdh4P39038 Gm7370-201ENSMUST00000219471 767 ntBASIC16.16■□□□□ 0.18
Cdh4P39038 Dcxr-201ENSMUST00000026144 892 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Cdh4P39038 Etnk1-201ENSMUST00000032413 6433 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Cdh4P39038 Card10-203ENSMUST00000170584 3220 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
Cdh4P39038 Ccni-201ENSMUST00000058550 2804 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Cdh4P39038 Tdh-201ENSMUST00000022522 1881 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Cdh4P39038 Sars2-201ENSMUST00000094632 1868 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Cdh4P39038 Vgf-201ENSMUST00000041543 2553 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Cdh4P39038 Arhgef10-201ENSMUST00000084207 5528 ntAPPRIS P4 TSL 1 (best) BASIC16.16■□□□□ 0.18
Cdh4P39038 Nudt16-201ENSMUST00000035179 1631 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Cdh4P39038 March3-202ENSMUST00000102912 1754 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Cdh4P39038 Ermp1-203ENSMUST00000159692 7058 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Cdh4P39038 Rasgrp2-201ENSMUST00000035716 2219 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
Cdh4P39038 Pdap1-201ENSMUST00000031627 2353 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Cdh4P39038 Map3k10-201ENSMUST00000036453 3682 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Cdh4P39038 Mycbp-202ENSMUST00000106202 1536 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Cdh4P39038 Sh3gl2-203ENSMUST00000107188 2286 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Cdh4P39038 St7l-202ENSMUST00000106769 2428 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Cdh4P39038 Prickle4-201ENSMUST00000113299 990 ntTSL 5 BASIC16.15■□□□□ 0.18
Cdh4P39038 Prickle4-202ENSMUST00000113300 1110 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
Cdh4P39038 Cyp4f41-ps-201ENSMUST00000126790 1077 ntBASIC16.15■□□□□ 0.18
Cdh4P39038 Gm10231-201ENSMUST00000181584 441 ntBASIC16.15■□□□□ 0.18
Cdh4P39038 Atp5g2-202ENSMUST00000185641 731 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Cdh4P39038 Mturn-203ENSMUST00000190641 5303 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Cdh4P39038 Gm10175-202ENSMUST00000208752 441 ntBASIC16.15■□□□□ 0.18
Cdh4P39038 Gadd45b-203ENSMUST00000220246 732 ntTSL 2 BASIC16.15■□□□□ 0.18
Cdh4P39038 AC158538.1-201ENSMUST00000225870 294 ntBASIC16.15■□□□□ 0.18
Cdh4P39038 AC121577.1-201ENSMUST00000227302 707 ntBASIC16.15■□□□□ 0.18
Cdh4P39038 Banf1-201ENSMUST00000025762 735 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Cdh4P39038 Tspan9-201ENSMUST00000032503 1405 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Cdh4P39038 Atp5g2-201ENSMUST00000075630 441 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Cdh4P39038 Atf7-209ENSMUST00000184485 2523 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Cdh4P39038 Nrl-201ENSMUST00000062232 2504 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Cdh4P39038 1810013L24Rik-201ENSMUST00000023150 4066 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Retrieved 100 of 76,532 protein–RNA pairs in 26.8 ms