Protein–RNA interactions for Protein: P29595

Nedd8, NEDD8, mousemouse

Predictions only

Length 81 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nedd8P29595 Gm12922-201ENSMUST00000120626 809 ntBASIC15.74■□□□□ 0.11
Nedd8P29595 Zcrb1-208ENSMUST00000162160 850 ntAPPRIS ALT1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Nedd8P29595 Myadml2-201ENSMUST00000026134 931 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Nedd8P29595 Serbp1-203ENSMUST00000203077 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Nedd8P29595 Gm21964-202ENSMUST00000213641 1649 ntAPPRIS ALT2 TSL 5 BASIC15.74■□□□□ 0.11
Nedd8P29595 Il3ra-203ENSMUST00000224163 2315 ntAPPRIS P2 BASIC15.74■□□□□ 0.11
Nedd8P29595 Mvp-202ENSMUST00000165096 2837 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Nedd8P29595 Cadps2-204ENSMUST00000115356 3533 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Nedd8P29595 Zmynd11-204ENSMUST00000110635 3881 ntTSL 5 BASIC15.74■□□□□ 0.11
Nedd8P29595 Tcf3-209ENSMUST00000105345 2950 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
Nedd8P29595 AC093043.3-201ENSMUST00000226531 2273 ntBASIC15.74■□□□□ 0.11
Nedd8P29595 Abhd16a-201ENSMUST00000007251 1945 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Nedd8P29595 Rgs3-203ENSMUST00000098031 2072 ntAPPRIS ALT1 TSL 5 BASIC15.74■□□□□ 0.11
Nedd8P29595 Rabl6-201ENSMUST00000058137 3230 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Nedd8P29595 Pola2-202ENSMUST00000165143 2397 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Nedd8P29595 Glmn-201ENSMUST00000078021 2015 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Nedd8P29595 Scube3-201ENSMUST00000043503 6699 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Nedd8P29595 Tcf3-204ENSMUST00000105340 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Nedd8P29595 Tcf3-202ENSMUST00000020379 2829 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Nedd8P29595 Paxbp1-202ENSMUST00000118522 3973 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Nedd8P29595 Slc32a1-201ENSMUST00000045738 2797 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Nedd8P29595 Ly6e-201ENSMUST00000051698 2281 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Nedd8P29595 Tarbp2-202ENSMUST00000100168 1278 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Nedd8P29595 Jagn1-201ENSMUST00000101070 1201 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Nedd8P29595 S100a6-201ENSMUST00000001051 731 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Nedd8P29595 Chrac1-202ENSMUST00000134353 538 ntAPPRIS ALT2 TSL 2 BASIC15.73■□□□□ 0.11
Nedd8P29595 Gm9847-201ENSMUST00000052528 599 ntBASIC15.73■□□□□ 0.11
Nedd8P29595 Hikeshi-201ENSMUST00000075010 715 ntTSL 3 BASIC15.73■□□□□ 0.11
Nedd8P29595 Hist1h2ao-201ENSMUST00000091745 480 ntAPPRIS P1 BASIC15.73■□□□□ 0.11
Nedd8P29595 Tmem119-201ENSMUST00000067853 2242 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Nedd8P29595 Tmem28-201ENSMUST00000096363 3909 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
Nedd8P29595 2510009E07Rik-201ENSMUST00000053336 5164 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Nedd8P29595 Aldh7a1-206ENSMUST00000172734 1880 ntTSL 5 BASIC15.73■□□□□ 0.11
Nedd8P29595 Lrch3-210ENSMUST00000170201 2902 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Nedd8P29595 Lsp1-204ENSMUST00000105967 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Nedd8P29595 H2afx-201ENSMUST00000052686 1384 ntAPPRIS P1 BASIC15.73■□□□□ 0.11
Nedd8P29595 Adamtsl1-201ENSMUST00000048885 1842 ntTSL 5 BASIC15.73■□□□□ 0.11
Nedd8P29595 Gm26889-201ENSMUST00000181523 2252 ntTSL 5 BASIC15.73■□□□□ 0.11
Nedd8P29595 Tatdn2-202ENSMUST00000113022 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Nedd8P29595 Axin1-201ENSMUST00000074370 3777 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
Nedd8P29595 Espn-212ENSMUST00000105658 2815 ntAPPRIS ALT2 TSL 5 BASIC15.72■□□□□ 0.11
Nedd8P29595 Crem-203ENSMUST00000082141 2820 ntTSL 5 BASIC15.72■□□□□ 0.11
Nedd8P29595 Zbtb7c-201ENSMUST00000058997 4569 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Nedd8P29595 Dnal4-201ENSMUST00000023055 1469 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Nedd8P29595 Naxd-202ENSMUST00000177955 1307 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Nedd8P29595 Gdf1-201ENSMUST00000207684 1349 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Nedd8P29595 Adgrb2-205ENSMUST00000106017 5104 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
Nedd8P29595 Svip-201ENSMUST00000098414 3053 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Nedd8P29595 Kifc3-212ENSMUST00000213004 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Nedd8P29595 Car9-201ENSMUST00000030183 2023 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Nedd8P29595 Tjp3-201ENSMUST00000045744 3024 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Nedd8P29595 Ugcg-201ENSMUST00000030074 4012 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Nedd8P29595 Fam213a-202ENSMUST00000118466 1567 ntAPPRIS ALT1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Nedd8P29595 Zfp879-203ENSMUST00000109134 2414 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
Nedd8P29595 Zfp879-201ENSMUST00000049625 2408 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Nedd8P29595 Cacng6-201ENSMUST00000108647 868 ntTSL 5 BASIC15.72■□□□□ 0.11
Nedd8P29595 Rps2-ps10-202ENSMUST00000170335 965 ntBASIC15.72■□□□□ 0.11
Nedd8P29595 Uncx-202ENSMUST00000174792 1196 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Nedd8P29595 Rab6b-202ENSMUST00000189134 716 ntTSL 3 BASIC15.72■□□□□ 0.11
Nedd8P29595 Gm29791-202ENSMUST00000207888 369 ntBASIC15.72■□□□□ 0.11
Nedd8P29595 Snrpd3-203ENSMUST00000220229 442 ntTSL 3 BASIC15.72■□□□□ 0.11
Nedd8P29595 Spaca1-201ENSMUST00000029927 1197 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
Nedd8P29595 Rasl10a-201ENSMUST00000037218 1110 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Nedd8P29595 Spaca1-202ENSMUST00000084734 1149 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Nedd8P29595 Gm10645-201ENSMUST00000098605 1090 ntAPPRIS P1 BASIC15.72■□□□□ 0.11
Nedd8P29595 Rfx5-202ENSMUST00000107253 4367 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Nedd8P29595 Flt1-202ENSMUST00000031653 6895 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Nedd8P29595 Zswim4-201ENSMUST00000039480 4625 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Nedd8P29595 Wac-215ENSMUST00000171042 2205 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Nedd8P29595 Nid1-201ENSMUST00000005532 6091 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Nedd8P29595 Shank1-202ENSMUST00000107935 6649 ntAPPRIS ALT2 TSL 5 BASIC15.72■□□□□ 0.11
Nedd8P29595 Osbpl1a-205ENSMUST00000119512 1947 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Nedd8P29595 Zbtb24-202ENSMUST00000213797 2734 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Nedd8P29595 Sh2b1-201ENSMUST00000032978 3393 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
Nedd8P29595 Pgap3-202ENSMUST00000090827 2419 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Nedd8P29595 Rab7-203ENSMUST00000113597 1859 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Nedd8P29595 Wdr91-201ENSMUST00000081214 2682 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Nedd8P29595 Patz1-205ENSMUST00000110043 3702 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
Nedd8P29595 Tfap2a-206ENSMUST00000224665 1958 ntAPPRIS ALT1 BASIC15.71■□□□□ 0.11
Nedd8P29595 C130074G19Rik-201ENSMUST00000048308 3035 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Nedd8P29595 Nfat5-211ENSMUST00000151114 4982 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
Nedd8P29595 Qprt-201ENSMUST00000032912 2050 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Nedd8P29595 Dleu2-203ENSMUST00000182259 1437 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Nedd8P29595 Ubn1-201ENSMUST00000052449 6455 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Nedd8P29595 0610010K14Rik-202ENSMUST00000021181 779 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Nedd8P29595 Gm10306-201ENSMUST00000094969 533 ntAPPRIS P1 BASIC15.71■□□□□ 0.11
Nedd8P29595 P3h1-201ENSMUST00000030393 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Nedd8P29595 B3galt6-201ENSMUST00000052185 3184 ntAPPRIS P1 BASIC15.71■□□□□ 0.11
Nedd8P29595 Hnrnpl-202ENSMUST00000172529 1898 ntTSL 5 BASIC15.71■□□□□ 0.11
Nedd8P29595 Elf2-202ENSMUST00000091144 2366 ntTSL 5 BASIC15.71■□□□□ 0.11
Nedd8P29595 Chst11-201ENSMUST00000040110 5527 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
Nedd8P29595 Lrrc36-206ENSMUST00000216765 2301 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.1
Nedd8P29595 Foxp4-201ENSMUST00000097311 3197 ntAPPRIS P4 TSL 1 (best) BASIC15.71■□□□□ 0.1
Nedd8P29595 Dclk2-208ENSMUST00000194452 2066 ntTSL 1 (best) BASIC15.71■□□□□ 0.1
Nedd8P29595 Gm43272-201ENSMUST00000200599 1584 ntBASIC15.7■□□□□ 0.1
Nedd8P29595 Arl4c-202ENSMUST00000159814 3997 ntAPPRIS P1 BASIC15.7■□□□□ 0.1
Nedd8P29595 A930001C03Rik-204ENSMUST00000154407 1402 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Nedd8P29595 Kctd6-202ENSMUST00000170111 3052 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Nedd8P29595 Ccdc106-204ENSMUST00000207974 2492 ntTSL 2 BASIC15.7■□□□□ 0.1
Nedd8P29595 Nkx2-1-201ENSMUST00000001536 2809 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Retrieved 100 of 76,532 protein–RNA pairs in 35 ms