Protein–RNA interactions for Protein: P27664

Pde6a, Rod cGMP-specific 3',5'-cyclic phosphodiesterase subunit alpha, mousemouse

Predictions only

Length 859 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pde6aP27664 Pdgfa-202ENSMUST00000076095 2060 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Pde6aP27664 Ncoa5-201ENSMUST00000040381 3179 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Pde6aP27664 Abr-202ENSMUST00000072740 5394 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
Pde6aP27664 P2rx5-201ENSMUST00000006104 2395 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Pde6aP27664 Ccnd3-ps-201ENSMUST00000117963 881 ntBASIC19.6■□□□□ 0.73
Pde6aP27664 Gm22697-201ENSMUST00000175194 63 ntBASIC19.6■□□□□ 0.73
Pde6aP27664 Bcl7c-205ENSMUST00000205977 891 ntTSL 2 BASIC19.6■□□□□ 0.73
Pde6aP27664 Ppp1cb-201ENSMUST00000015100 5962 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Pde6aP27664 Lrrc36-206ENSMUST00000216765 2301 ntAPPRIS ALT2 TSL 5 BASIC19.6■□□□□ 0.73
Pde6aP27664 Itgb7-201ENSMUST00000001327 2674 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Pde6aP27664 Pid1-201ENSMUST00000168574 2664 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Pde6aP27664 Cenpw-201ENSMUST00000099985 1532 ntAPPRIS P2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Pde6aP27664 Evx2-201ENSMUST00000001867 4191 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Pde6aP27664 Nr1h2-204ENSMUST00000107912 1839 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
Pde6aP27664 Gm45203-201ENSMUST00000206384 1831 ntBASIC19.6■□□□□ 0.73
Pde6aP27664 Zcchc4-203ENSMUST00000113904 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Pde6aP27664 Zbtb22-201ENSMUST00000053429 2611 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Pde6aP27664 Trpc4ap-201ENSMUST00000041059 3204 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
Pde6aP27664 Zbtb5-204ENSMUST00000180217 4708 ntAPPRIS P1 TSL 2 BASIC19.59■□□□□ 0.73
Pde6aP27664 Phf7-203ENSMUST00000226565 1971 ntBASIC19.59■□□□□ 0.73
Pde6aP27664 Fjx1-201ENSMUST00000099678 3134 ntAPPRIS P1 BASIC19.59■□□□□ 0.73
Pde6aP27664 Klf14-201ENSMUST00000101589 3056 ntAPPRIS P1 BASIC19.59■□□□□ 0.73
Pde6aP27664 Sult2b1-204ENSMUST00000209739 1858 ntAPPRIS ALT2 TSL 5 BASIC19.59■□□□□ 0.73
Pde6aP27664 Atp5g1-202ENSMUST00000107684 596 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Pde6aP27664 Ppdpf-201ENSMUST00000016488 1160 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Pde6aP27664 Hist1h2br-203ENSMUST00000180288 1256 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Pde6aP27664 Trip10-205ENSMUST00000224885 2136 ntAPPRIS ALT2 BASIC19.59■□□□□ 0.73
Pde6aP27664 Cenps-201ENSMUST00000030813 1110 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Pde6aP27664 Lce1h-201ENSMUST00000051521 706 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Pde6aP27664 Snx12-201ENSMUST00000077876 1002 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Pde6aP27664 Hist1h2bq-202ENSMUST00000091749 1254 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Pde6aP27664 Gpr161-202ENSMUST00000178700 1827 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
Pde6aP27664 Uso1-204ENSMUST00000202155 3707 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
Pde6aP27664 Coq8b-202ENSMUST00000108378 2276 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Pde6aP27664 Rcc1-201ENSMUST00000030726 2278 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Pde6aP27664 Napa-201ENSMUST00000006181 2517 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Pde6aP27664 Tulp1-202ENSMUST00000114794 1738 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Pde6aP27664 Slc47a1-201ENSMUST00000010267 2639 ntAPPRIS P1 TSL 2 BASIC19.58■□□□□ 0.73
Pde6aP27664 Zfp804a-201ENSMUST00000047527 4620 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Pde6aP27664 Snip1-201ENSMUST00000052183 2345 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Pde6aP27664 Gdf15-201ENSMUST00000003808 1545 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Pde6aP27664 AU022751-202ENSMUST00000117544 2201 ntAPPRIS P4 BASIC19.58■□□□□ 0.73
Pde6aP27664 Taf6l-205ENSMUST00000176496 2224 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
Pde6aP27664 Eefsec-201ENSMUST00000165242 2679 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Pde6aP27664 Gmcl1-202ENSMUST00000113679 960 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
Pde6aP27664 4930544D05Rik-204ENSMUST00000180052 755 ntAPPRIS ALT2 TSL 5 BASIC19.58■□□□□ 0.72
Pde6aP27664 Pthlh-202ENSMUST00000204197 1281 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.72
Pde6aP27664 AC107711.5-202ENSMUST00000226429 702 ntBASIC19.58■□□□□ 0.72
Pde6aP27664 Iscu-201ENSMUST00000026937 957 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Pde6aP27664 Sox6os-201ENSMUST00000032900 420 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
Pde6aP27664 Zdhhc6-209ENSMUST00000225495 1711 ntBASIC19.58■□□□□ 0.72
Pde6aP27664 Krt73-201ENSMUST00000063292 2165 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Pde6aP27664 2810408A11Rik-204ENSMUST00000108621 1455 ntAPPRIS ALT2 TSL 5 BASIC19.58■□□□□ 0.72
Pde6aP27664 Slc16a7-205ENSMUST00000210780 2562 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.72
Pde6aP27664 Otud5-201ENSMUST00000033494 4259 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.72
Pde6aP27664 Sox18-201ENSMUST00000054491 1620 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Pde6aP27664 Fem1c-201ENSMUST00000036226 5726 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Pde6aP27664 Sort1-201ENSMUST00000102632 6796 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.72
Pde6aP27664 Uchl5-201ENSMUST00000018333 1845 ntAPPRIS ALT1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Pde6aP27664 Nisch-221ENSMUST00000171735 1763 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Pde6aP27664 Ttc13-201ENSMUST00000041614 3038 ntTSL 2 BASIC19.57■□□□□ 0.72
Pde6aP27664 Eif2b5-201ENSMUST00000003320 3186 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Pde6aP27664 Nagk-203ENSMUST00000113851 1323 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Pde6aP27664 Dus3l-201ENSMUST00000007747 2303 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Pde6aP27664 Dnajc19-201ENSMUST00000011029 2499 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Pde6aP27664 Fam46c-201ENSMUST00000061455 5640 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Pde6aP27664 Zfp648-201ENSMUST00000086195 1892 ntAPPRIS P1 TSL 3 BASIC19.57■□□□□ 0.72
Pde6aP27664 Gpha2-202ENSMUST00000113526 762 ntAPPRIS P1 TSL 5 BASIC19.57■□□□□ 0.72
Pde6aP27664 Bola2-203ENSMUST00000130498 1266 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Pde6aP27664 Gm26039-201ENSMUST00000158152 144 ntBASIC19.57■□□□□ 0.72
Pde6aP27664 Ccdc125-202ENSMUST00000170347 1216 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
Pde6aP27664 Gm18101-201ENSMUST00000215769 548 ntBASIC19.57■□□□□ 0.72
Pde6aP27664 Gm21559-201ENSMUST00000220638 855 ntBASIC19.57■□□□□ 0.72
Pde6aP27664 Gpha2-201ENSMUST00000025698 609 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Pde6aP27664 Mrps33-201ENSMUST00000031978 1107 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Pde6aP27664 Krtcap3-201ENSMUST00000054829 904 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Pde6aP27664 Hoxa6-201ENSMUST00000062829 874 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Pde6aP27664 Gm8587-201ENSMUST00000076538 843 ntBASIC19.57■□□□□ 0.72
Pde6aP27664 Acvrl1-203ENSMUST00000119063 1818 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Pde6aP27664 Dtx2-201ENSMUST00000005072 2562 ntAPPRIS P3 TSL 1 (best) BASIC19.57■□□□□ 0.72
Pde6aP27664 Tmem163-203ENSMUST00000160616 2657 ntAPPRIS P1 TSL 2 BASIC19.57■□□□□ 0.72
Pde6aP27664 Gm6190-201ENSMUST00000220683 1374 ntBASIC19.57■□□□□ 0.72
Pde6aP27664 Grk6-201ENSMUST00000001115 2994 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
Pde6aP27664 Cdv3-207ENSMUST00000190226 3107 ntTSL 5 BASIC19.56■□□□□ 0.72
Pde6aP27664 4930455H04Rik-201ENSMUST00000117592 1341 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Pde6aP27664 Disc1-208ENSMUST00000122389 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
Pde6aP27664 Psen2-205ENSMUST00000111108 1997 ntAPPRIS P2 TSL 1 (best) BASIC19.56■□□□□ 0.72
Pde6aP27664 Cdc42ep3-201ENSMUST00000068958 1967 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Pde6aP27664 Msx2-201ENSMUST00000021922 2453 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Pde6aP27664 Acaa1a-203ENSMUST00000175743 1219 ntTSL 5 BASIC19.56■□□□□ 0.72
Pde6aP27664 Acaa1a-207ENSMUST00000176397 996 ntTSL 5 BASIC19.56■□□□□ 0.72
Pde6aP27664 Dph1-201ENSMUST00000044949 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Pde6aP27664 Pdcd2-201ENSMUST00000054450 1120 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Pde6aP27664 Hist1h2ai-201ENSMUST00000070124 393 ntAPPRIS P1 BASIC19.56■□□□□ 0.72
Pde6aP27664 Hist1h2an-201ENSMUST00000091751 393 ntAPPRIS P1 BASIC19.56■□□□□ 0.72
Pde6aP27664 F830208F22Rik-202ENSMUST00000143732 2891 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Pde6aP27664 Hoxc9-201ENSMUST00000001706 2374 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Pde6aP27664 Gm27029-201ENSMUST00000107257 1898 ntAPPRIS ALT2 TSL 5 BASIC19.56■□□□□ 0.72
Pde6aP27664 Irak1-205ENSMUST00000114353 1896 ntAPPRIS ALT2 TSL 5 BASIC19.56■□□□□ 0.72
Pde6aP27664 Mdm1-204ENSMUST00000169817 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
Retrieved 100 of 76,532 protein–RNA pairs in 21.8 ms