Protein–RNA interactions for Protein: P25318

Col8a2, Collagen alpha-2(VIII) chain, mousemouse

Predictions only

Length 699 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col8a2P25318 Sri-205ENSMUST00000148633 2251 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Col8a2P25318 Plekhg3-207ENSMUST00000219063 4535 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
Col8a2P25318 Nucb2-201ENSMUST00000032895 1685 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Col8a2P25318 Tedc2-201ENSMUST00000024930 2166 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Col8a2P25318 Mfsd6-205ENSMUST00000156876 4932 ntAPPRIS P4 TSL 5 BASIC14.13□□□□□ -0.15
Col8a2P25318 Yars2-204ENSMUST00000159962 2805 ntTSL 2 BASIC14.13□□□□□ -0.15
Col8a2P25318 Gm45203-201ENSMUST00000206384 1831 ntBASIC14.13□□□□□ -0.15
Col8a2P25318 Slbp-203ENSMUST00000101354 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Col8a2P25318 Haus4-201ENSMUST00000022784 1587 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Col8a2P25318 Bcl9l-206ENSMUST00000220303 5760 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Col8a2P25318 Enah-210ENSMUST00000193074 1971 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
Col8a2P25318 Pdzd8-201ENSMUST00000099274 7076 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Col8a2P25318 Mepce-201ENSMUST00000031740 3128 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Col8a2P25318 Ptgis-202ENSMUST00000088041 1711 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Col8a2P25318 Gm7292-201ENSMUST00000194706 2527 ntBASIC14.12□□□□□ -0.15
Col8a2P25318 Frmd5-203ENSMUST00000121219 2262 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Col8a2P25318 Ascl2-201ENSMUST00000009392 1605 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Col8a2P25318 Itgb7-201ENSMUST00000001327 2674 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Col8a2P25318 March11-203ENSMUST00000152841 1365 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Col8a2P25318 Atp1b1-201ENSMUST00000027863 2580 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Col8a2P25318 Dok4-201ENSMUST00000046461 2590 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Col8a2P25318 Tlk2-204ENSMUST00000106941 3699 ntAPPRIS ALT1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Col8a2P25318 Urah-202ENSMUST00000106050 719 ntAPPRIS ALT2 TSL 2 BASIC14.12□□□□□ -0.15
Col8a2P25318 Gm21362-201ENSMUST00000194272 928 ntBASIC14.12□□□□□ -0.15
Col8a2P25318 Gm34933-201ENSMUST00000203245 1067 ntTSL 5 BASIC14.12□□□□□ -0.15
Col8a2P25318 Ndufs7-201ENSMUST00000020361 758 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Col8a2P25318 Pdrg1-201ENSMUST00000028972 1273 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Col8a2P25318 Grcc10-201ENSMUST00000004389 863 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Col8a2P25318 Cdkn2c-201ENSMUST00000063531 1106 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Col8a2P25318 Pym1-201ENSMUST00000065210 1156 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Col8a2P25318 Gna12-201ENSMUST00000000153 3416 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Col8a2P25318 Gm6598-201ENSMUST00000202719 2615 ntBASIC14.12□□□□□ -0.15
Col8a2P25318 Coil-201ENSMUST00000036649 2607 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Col8a2P25318 Hyls1-201ENSMUST00000115110 1973 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Col8a2P25318 Rab40c-207ENSMUST00000167626 2506 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Col8a2P25318 Wt1-205ENSMUST00000143043 3090 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Col8a2P25318 Pou2f2-202ENSMUST00000108413 1599 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Col8a2P25318 Synm-205ENSMUST00000208815 2697 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
Col8a2P25318 Rasip1-201ENSMUST00000057927 3202 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Col8a2P25318 Taf6l-201ENSMUST00000003777 1869 ntTSL 5 BASIC14.12□□□□□ -0.15
Col8a2P25318 Cd47-201ENSMUST00000084838 5277 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Col8a2P25318 Tubb6-201ENSMUST00000001513 1757 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Col8a2P25318 Senp3-202ENSMUST00000066760 2219 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Col8a2P25318 Sema6d-203ENSMUST00000077847 6444 ntTSL 5 BASIC14.11□□□□□ -0.15
Col8a2P25318 Fam131b-203ENSMUST00000143278 4104 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
Col8a2P25318 Atp2c1-201ENSMUST00000038118 4876 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
Col8a2P25318 Parg-208ENSMUST00000170840 2894 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
Col8a2P25318 Hist1h2bj-201ENSMUST00000110452 463 ntAPPRIS P1 BASIC14.11□□□□□ -0.15
Col8a2P25318 Hist1h2bp-202ENSMUST00000110473 621 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Col8a2P25318 Xpr1-202ENSMUST00000111774 2753 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Col8a2P25318 Rbbp7-203ENSMUST00000112327 1862 ntTSL 5 BASIC14.11□□□□□ -0.15
Col8a2P25318 Rab3d-202ENSMUST00000119055 694 ntTSL 3 BASIC14.11□□□□□ -0.15
Col8a2P25318 Mir142hg-201ENSMUST00000123700 269 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Col8a2P25318 Gm15545-202ENSMUST00000141011 899 ntTSL 3 BASIC14.11□□□□□ -0.15
Col8a2P25318 Gm43791-201ENSMUST00000202914 468 ntTSL 5 BASIC14.11□□□□□ -0.15
Col8a2P25318 Hist1h2bm-201ENSMUST00000224651 524 ntAPPRIS P1 BASIC14.11□□□□□ -0.15
Col8a2P25318 Tnfsf14-201ENSMUST00000005976 1859 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Col8a2P25318 Crebzf-201ENSMUST00000061767 3376 ntAPPRIS P1 BASIC14.11□□□□□ -0.15
Col8a2P25318 Hoxa6-201ENSMUST00000062829 874 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Col8a2P25318 Fam131c-201ENSMUST00000006380 1433 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Col8a2P25318 Gm15635-204ENSMUST00000208024 2539 ntBASIC14.11□□□□□ -0.15
Col8a2P25318 Crocc-211ENSMUST00000168157 6244 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Col8a2P25318 Crocc-201ENSMUST00000040222 6248 ntTSL 5 BASIC14.11□□□□□ -0.15
Col8a2P25318 AL590614.2-201ENSMUST00000225374 1937 ntBASIC14.11□□□□□ -0.15
Col8a2P25318 2310002F09Rik-201ENSMUST00000181454 1607 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Col8a2P25318 2810408A11Rik-204ENSMUST00000108621 1455 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
Col8a2P25318 Kcnq2-201ENSMUST00000016491 3067 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Col8a2P25318 Sf1-202ENSMUST00000113487 2649 ntAPPRIS ALT1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Col8a2P25318 Hhipl1-201ENSMUST00000021685 5174 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Col8a2P25318 Hspa1l-201ENSMUST00000007248 2472 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Col8a2P25318 Mta1-201ENSMUST00000009099 2826 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
Col8a2P25318 Dab2-208ENSMUST00000160134 1374 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
Col8a2P25318 Ppp1r1b-201ENSMUST00000078694 2001 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Col8a2P25318 Lhx8-205ENSMUST00000205251 1729 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
Col8a2P25318 Nfib-204ENSMUST00000107246 3075 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Col8a2P25318 Tnrc18-201ENSMUST00000151477 6487 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Col8a2P25318 Senp2-201ENSMUST00000023561 4499 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Col8a2P25318 Hspa5-202ENSMUST00000100171 2613 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Col8a2P25318 Gm27389-201ENSMUST00000183622 195 ntBASIC14.1□□□□□ -0.15
Col8a2P25318 Gm38282-201ENSMUST00000192751 695 ntTSL 5 BASIC14.1□□□□□ -0.15
Col8a2P25318 Mrpl43-201ENSMUST00000097715 1213 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Col8a2P25318 Tm9sf1-205ENSMUST00000122358 2517 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Col8a2P25318 Hsf5-201ENSMUST00000093956 4158 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
Col8a2P25318 A430078I02Rik-202ENSMUST00000154066 2233 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Col8a2P25318 Lrrc47-205ENSMUST00000169622 3468 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Col8a2P25318 9430097D07Rik-201ENSMUST00000100190 1501 ntAPPRIS P1 BASIC14.1□□□□□ -0.15
Col8a2P25318 Ogg1-201ENSMUST00000032406 1549 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Col8a2P25318 Gdf15-201ENSMUST00000003808 1545 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Col8a2P25318 Cenpw-201ENSMUST00000099985 1532 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Col8a2P25318 Trim14-202ENSMUST00000102924 1582 ntTSL 2 BASIC14.09□□□□□ -0.15
Col8a2P25318 Nmnat3-201ENSMUST00000112935 2166 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Col8a2P25318 Gm10649-203ENSMUST00000148066 1812 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Col8a2P25318 Cldn4-201ENSMUST00000051401 1816 ntAPPRIS P1 BASIC14.09□□□□□ -0.15
Col8a2P25318 Gm13032-201ENSMUST00000151848 2001 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Col8a2P25318 0610010K14Rik-207ENSMUST00000108577 659 ntTSL 5 BASIC14.09□□□□□ -0.15
Col8a2P25318 Gpha2-202ENSMUST00000113526 762 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
Col8a2P25318 Rpl14-201ENSMUST00000165532 1009 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Col8a2P25318 Lmbrd1-202ENSMUST00000186096 688 ntTSL 2 BASIC14.09□□□□□ -0.15
Col8a2P25318 Pagr1a-203ENSMUST00000206416 558 ntTSL 3 BASIC14.09□□□□□ -0.15
Col8a2P25318 Eif3h-201ENSMUST00000022925 1295 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 17.7 ms