Protein–RNA interactions for Protein: P14576

Srp54, Signal recognition particle 54 kDa protein, mousemouse

Predictions only

Length 504 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Srp54P14576 Pea15a-201ENSMUST00000013842 2501 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Srp54P14576 Nfkbib-201ENSMUST00000032815 2061 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Srp54P14576 Rab6b-201ENSMUST00000035155 5007 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Srp54P14576 Mink1-202ENSMUST00000072873 4610 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
Srp54P14576 Mff-202ENSMUST00000078332 1894 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Srp54P14576 Fjx1-201ENSMUST00000099678 3134 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
Srp54P14576 Stam2-202ENSMUST00000127316 1928 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Srp54P14576 Npb-202ENSMUST00000106194 530 ntAPPRIS ALT2 TSL 2 BASIC16.62■□□□□ 0.25
Srp54P14576 Npb-203ENSMUST00000106195 542 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
Srp54P14576 Atp5g1-202ENSMUST00000107684 596 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Srp54P14576 Gm11355-201ENSMUST00000121120 306 ntBASIC16.62■□□□□ 0.25
Srp54P14576 Pdrg1-201ENSMUST00000028972 1273 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Srp54P14576 Kbtbd13-201ENSMUST00000068307 2969 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
Srp54P14576 Rab11fip5-202ENSMUST00000204087 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Srp54P14576 Dtnbp1-203ENSMUST00000220555 1589 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
Srp54P14576 Cklf-208ENSMUST00000212433 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Srp54P14576 2810408A11Rik-203ENSMUST00000102580 1640 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
Srp54P14576 Braf-201ENSMUST00000002487 9728 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Srp54P14576 Prkar2a-201ENSMUST00000035220 4965 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Srp54P14576 Slc30a5-205ENSMUST00000225922 2722 ntAPPRIS ALT2 BASIC16.61■□□□□ 0.25
Srp54P14576 C2cd4c-202ENSMUST00000178228 2761 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Srp54P14576 Adpgk-205ENSMUST00000217570 2484 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Srp54P14576 Tbx20-202ENSMUST00000166018 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Srp54P14576 Trim45-202ENSMUST00000094048 1815 ntTSL 5 BASIC16.61■□□□□ 0.25
Srp54P14576 Krt27-201ENSMUST00000017732 1550 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Srp54P14576 AC125311.2-201ENSMUST00000227477 1940 ntBASIC16.61■□□□□ 0.25
Srp54P14576 Sgta-201ENSMUST00000005067 1969 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Srp54P14576 Hist1h4a-201ENSMUST00000102964 539 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
Srp54P14576 Gm14859-201ENSMUST00000117752 357 ntBASIC16.61■□□□□ 0.25
Srp54P14576 Gm34933-201ENSMUST00000203245 1067 ntTSL 5 BASIC16.61■□□□□ 0.25
Srp54P14576 Nme3-201ENSMUST00000024978 715 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Srp54P14576 Nkx2-6-201ENSMUST00000062437 1134 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Srp54P14576 Nt5c1a-201ENSMUST00000068262 1220 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Srp54P14576 Lrrc14-204ENSMUST00000137649 2832 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Srp54P14576 Prmt2-202ENSMUST00000099571 2052 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
Srp54P14576 Tmem132c-201ENSMUST00000119026 5134 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Srp54P14576 Shroom4-202ENSMUST00000103005 4839 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Srp54P14576 Lrriq4-203ENSMUST00000172350 1797 ntAPPRIS P3 TSL 5 BASIC16.61■□□□□ 0.25
Srp54P14576 Gm26697-201ENSMUST00000180898 1760 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Srp54P14576 Fst-201ENSMUST00000022287 2556 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Srp54P14576 Spout1-201ENSMUST00000100220 1805 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Srp54P14576 AC154855.1-201ENSMUST00000227353 1458 ntBASIC16.61■□□□□ 0.25
Srp54P14576 Igsf23-201ENSMUST00000043440 1908 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Srp54P14576 Gm21949-201ENSMUST00000182006 2369 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
Srp54P14576 Actl10-201ENSMUST00000104928 1501 ntAPPRIS P1 BASIC16.6■□□□□ 0.25
Srp54P14576 Acot7-206ENSMUST00000167926 1505 ntAPPRIS P4 TSL 1 (best) BASIC16.6■□□□□ 0.25
Srp54P14576 Actl10-202ENSMUST00000226583 1501 ntBASIC16.6■□□□□ 0.25
Srp54P14576 Cmip-202ENSMUST00000166750 2408 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
Srp54P14576 Rai1-201ENSMUST00000064190 7348 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Srp54P14576 Tmem198-201ENSMUST00000050899 2456 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Srp54P14576 4930540M05Rik-201ENSMUST00000180527 2068 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Srp54P14576 Abhd5-202ENSMUST00000111497 2576 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Srp54P14576 Uhrf2-201ENSMUST00000025739 3536 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Srp54P14576 Alcam-201ENSMUST00000023312 6036 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Srp54P14576 Gm21057-201ENSMUST00000206022 670 ntTSL 3 BASIC16.6■□□□□ 0.25
Srp54P14576 Irak1bp1-201ENSMUST00000034783 1159 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Srp54P14576 Nit1-202ENSMUST00000111295 1335 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
Srp54P14576 Smu1-201ENSMUST00000030117 2418 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Srp54P14576 Plppr3-207ENSMUST00000167250 3063 ntAPPRIS ALT2 TSL 2 BASIC16.6■□□□□ 0.25
Srp54P14576 Podxl2-201ENSMUST00000038409 1994 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
Srp54P14576 Adnp-202ENSMUST00000088001 4932 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Srp54P14576 Dnajc2-201ENSMUST00000030771 2133 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Srp54P14576 Ciz1-201ENSMUST00000048964 2771 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
Srp54P14576 Tgfb1-201ENSMUST00000002678 2175 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Srp54P14576 Hikeshi-206ENSMUST00000153470 2224 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Srp54P14576 Stox1-202ENSMUST00000133371 3510 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Srp54P14576 Klhdc8b-214ENSMUST00000195435 1612 ntTSL 5 BASIC16.59■□□□□ 0.25
Srp54P14576 Nudt16-201ENSMUST00000035179 1631 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Srp54P14576 Ttbk1-201ENSMUST00000047034 6959 ntAPPRIS P2 TSL 5 BASIC16.59■□□□□ 0.25
Srp54P14576 Hoxc9-201ENSMUST00000001706 2374 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Srp54P14576 Ccdc105-201ENSMUST00000105383 1714 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Srp54P14576 Atad3a-201ENSMUST00000030903 2413 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Srp54P14576 Tmem132e-201ENSMUST00000054245 4386 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Srp54P14576 Hnrnph3-203ENSMUST00000119814 682 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Srp54P14576 Rpl14-201ENSMUST00000165532 1009 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Srp54P14576 Ndufab1-ps-201ENSMUST00000166096 468 ntBASIC16.59■□□□□ 0.25
Srp54P14576 Gm4316-202ENSMUST00000212490 1115 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Srp54P14576 4933427E11Rik-201ENSMUST00000056711 1214 ntBASIC16.59■□□□□ 0.25
Srp54P14576 Fthl17f-201ENSMUST00000097029 847 ntAPPRIS P1 BASIC16.59■□□□□ 0.25
Srp54P14576 C530025M09Rik-201ENSMUST00000099264 690 ntAPPRIS P1 BASIC16.59■□□□□ 0.25
Srp54P14576 Rnf208-202ENSMUST00000114355 1333 ntAPPRIS P1 BASIC16.59■□□□□ 0.25
Srp54P14576 Zdhhc6-201ENSMUST00000076891 2263 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Srp54P14576 Ctbp2-201ENSMUST00000033269 2321 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Srp54P14576 Fam131c-201ENSMUST00000006380 1433 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Srp54P14576 Bicc1-203ENSMUST00000143791 5431 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Srp54P14576 Rcbtb2-226ENSMUST00000171767 2692 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Srp54P14576 Whrn-205ENSMUST00000095038 2665 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Srp54P14576 Cspg5-202ENSMUST00000196060 3790 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Srp54P14576 Gcat-202ENSMUST00000171999 1763 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Srp54P14576 Tmed4-201ENSMUST00000004508 2003 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Srp54P14576 Slc43a1-202ENSMUST00000111624 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.25
Srp54P14576 Deaf1-209ENSMUST00000211537 2882 ntTSL 2 BASIC16.58■□□□□ 0.25
Srp54P14576 Gm20517-202ENSMUST00000132397 4807 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Srp54P14576 Mdfi-203ENSMUST00000113280 1281 ntTSL 5 BASIC16.58■□□□□ 0.24
Srp54P14576 Gm15545-203ENSMUST00000150613 1059 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Srp54P14576 Gm8797-201ENSMUST00000192045 490 ntAPPRIS P1 BASIC16.58■□□□□ 0.24
Srp54P14576 AC156832.2-201ENSMUST00000216217 1295 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Srp54P14576 Ak6-201ENSMUST00000022135 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Srp54P14576 Iscu-201ENSMUST00000026937 957 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Srp54P14576 Sox6os-201ENSMUST00000032900 420 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Retrieved 100 of 76,532 protein–RNA pairs in 43.5 ms