Protein–RNA interactions for Protein: P04940

Ig kappa chain V-VI region NQ2-17.4.1, mousemouse

Predictions only

Length 107 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P04940 Brd3os-202ENSMUST00000209765 1898 ntAPPRIS P1 BASIC13.71□□□□□ -0.21
P04940 Pcnx-204ENSMUST00000221721 8318 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.21
P04940 Lrrc47-205ENSMUST00000169622 3468 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.22
P04940 Mcl1-201ENSMUST00000037947 3418 ntAPPRIS P2 TSL 1 (best) BASIC13.71□□□□□ -0.22
P04940 Eps8-203ENSMUST00000111878 3560 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
P04940 Ripor2-202ENSMUST00000058009 2550 ntAPPRIS ALT2 TSL 2 BASIC13.71□□□□□ -0.22
P04940 Pou2f2-202ENSMUST00000108413 1599 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
P04940 Gm12359-201ENSMUST00000139017 1399 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
P04940 Fndc11-201ENSMUST00000050026 1387 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
P04940 Crk-203ENSMUST00000108425 4290 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
P04940 Gprin1-202ENSMUST00000135343 4248 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
P04940 Tasp1-201ENSMUST00000046656 2480 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
P04940 Mpst-203ENSMUST00000169133 1309 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
P04940 Fcho1-209ENSMUST00000146100 3188 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
P04940 Lrrfip2-202ENSMUST00000098340 3191 ntAPPRIS P2 TSL 1 (best) BASIC13.7□□□□□ -0.22
P04940 Cobll1-205ENSMUST00000112431 5024 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
P04940 Hoxd4-201ENSMUST00000047904 2560 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
P04940 Bcar1-201ENSMUST00000166232 3142 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
P04940 Echdc2-203ENSMUST00000116307 893 ntTSL 5 BASIC13.7□□□□□ -0.22
P04940 Spdya-202ENSMUST00000124001 1247 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
P04940 Gng2-202ENSMUST00000159028 458 ntAPPRIS P1 TSL 2 BASIC13.7□□□□□ -0.22
P04940 Btg1-202ENSMUST00000218953 668 ntTSL 2 BASIC13.7□□□□□ -0.22
P04940 Clasrp-201ENSMUST00000086041 2180 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
P04940 Pacsin1-203ENSMUST00000114872 1647 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
P04940 Gnas-222ENSMUST00000180362 1645 ntTSL 5 BASIC13.7□□□□□ -0.22
P04940 Celf3-208ENSMUST00000198316 2505 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
P04940 Snip1-201ENSMUST00000052183 2345 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
P04940 Pole4-201ENSMUST00000095786 1769 ntAPPRIS P2 TSL 1 (best) BASIC13.7□□□□□ -0.22
P04940 Evc-202ENSMUST00000114148 2119 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
P04940 Whrn-206ENSMUST00000102867 4013 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
P04940 Eri1-201ENSMUST00000033927 5079 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
P04940 Slc16a7-205ENSMUST00000210780 2562 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
P04940 A530084C06Rik-201ENSMUST00000170573 3200 ntAPPRIS P1 BASIC13.69□□□□□ -0.22
P04940 Tm9sf1-205ENSMUST00000122358 2517 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
P04940 Zfp668-203ENSMUST00000106262 3169 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
P04940 Rundc3a-202ENSMUST00000107102 1837 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
P04940 4930455H04Rik-201ENSMUST00000117592 1341 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
P04940 Hmg20b-213ENSMUST00000167481 1321 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
P04940 Map4k4-202ENSMUST00000168431 5632 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
P04940 Ptges3l-202ENSMUST00000103102 1463 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
P04940 Mink1-205ENSMUST00000102559 4865 ntAPPRIS P4 TSL 1 (best) BASIC13.69□□□□□ -0.22
P04940 Kcnn1-207ENSMUST00000212509 1608 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
P04940 Ewsr1-203ENSMUST00000079949 2588 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
P04940 2210408F21Rik-204ENSMUST00000136571 478 ntTSL 3 BASIC13.69□□□□□ -0.22
P04940 Ube2a-208ENSMUST00000202812 719 ntTSL 2 BASIC13.69□□□□□ -0.22
P04940 Thrsp-201ENSMUST00000043077 1277 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
P04940 Rab35-201ENSMUST00000031492 2820 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
P04940 Wdr13-202ENSMUST00000115623 1749 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
P04940 Uri1-201ENSMUST00000085513 3441 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
P04940 3110002H16Rik-201ENSMUST00000025276 2170 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
P04940 Casp9-201ENSMUST00000030747 3897 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
P04940 Large1-202ENSMUST00000119826 4647 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
P04940 Ube2z-201ENSMUST00000100528 3997 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
P04940 Wnt10b-204ENSMUST00000226655 1807 ntBASIC13.69□□□□□ -0.22
P04940 Trim37-201ENSMUST00000041282 5632 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
P04940 Zic3-202ENSMUST00000088629 1951 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
P04940 Cwh43-201ENSMUST00000031040 2716 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
P04940 Zkscan2-203ENSMUST00000128217 2218 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
P04940 Vmn1r17-201ENSMUST00000227186 2234 ntAPPRIS P2 BASIC13.68□□□□□ -0.22
P04940 Osbpl1a-205ENSMUST00000119512 1947 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
P04940 Wipf1-201ENSMUST00000094681 4728 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
P04940 Cdca7-201ENSMUST00000102691 2424 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
P04940 Bad-202ENSMUST00000113423 990 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
P04940 Gm26938-201ENSMUST00000182839 744 ntAPPRIS P1 TSL 3 BASIC13.68□□□□□ -0.22
P04940 Gm45618-201ENSMUST00000209890 660 ntAPPRIS P1 BASIC13.68□□□□□ -0.22
P04940 Gm7370-201ENSMUST00000219471 767 ntBASIC13.68□□□□□ -0.22
P04940 Med29-201ENSMUST00000003536 1281 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
P04940 Cnpy1-202ENSMUST00000118882 1984 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
P04940 Rilpl1-201ENSMUST00000062153 2249 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
P04940 Gm6190-201ENSMUST00000220683 1374 ntBASIC13.68□□□□□ -0.22
P04940 Mipep-201ENSMUST00000063562 3015 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
P04940 Mef2d-203ENSMUST00000107559 1791 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
P04940 Stxbp3-205ENSMUST00000138552 1789 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
P04940 Taf6l-213ENSMUST00000189739 1794 ntTSL 5 BASIC13.68□□□□□ -0.22
P04940 Sec14l1-203ENSMUST00000103026 2589 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
P04940 Abhd11-206ENSMUST00000154469 1473 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
P04940 Faap20-201ENSMUST00000097747 1479 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
P04940 Trim31-201ENSMUST00000078438 2257 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
P04940 Gnb1-202ENSMUST00000105616 3088 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
P04940 Sh2b1-203ENSMUST00000205440 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
P04940 Cul4a-201ENSMUST00000016680 3728 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
P04940 Lrrtm1-202ENSMUST00000159616 2541 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
P04940 Napa-201ENSMUST00000006181 2517 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
P04940 Dnajc2-201ENSMUST00000030771 2133 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
P04940 Bdkrb1-202ENSMUST00000182899 1313 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
P04940 Bdkrb1-201ENSMUST00000041229 1338 ntAPPRIS P1 BASIC13.67□□□□□ -0.22
P04940 Tead3-205ENSMUST00000154873 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
P04940 Casp3-204ENSMUST00000211115 2601 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
P04940 AU022751-202ENSMUST00000117544 2201 ntAPPRIS P4 BASIC13.67□□□□□ -0.22
P04940 Baiap2-204ENSMUST00000106231 4005 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
P04940 Zic1-202ENSMUST00000065360 2811 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
P04940 Zbtb24-201ENSMUST00000080771 2844 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
P04940 Pitpnm1-201ENSMUST00000049658 4206 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
P04940 Ebf3-204ENSMUST00000169486 4994 ntAPPRIS ALT1 TSL 5 BASIC13.67□□□□□ -0.22
P04940 Rpl18-ps2-201ENSMUST00000118863 567 ntBASIC13.67□□□□□ -0.22
P04940 Hmga1-206ENSMUST00000119486 1003 ntAPPRIS P3 TSL 2 BASIC13.67□□□□□ -0.22
P04940 Gm11539-201ENSMUST00000119837 557 ntBASIC13.67□□□□□ -0.22
P04940 Gm13436-201ENSMUST00000120418 567 ntBASIC13.67□□□□□ -0.22
P04940 Gm16061-201ENSMUST00000122167 857 ntBASIC13.67□□□□□ -0.22
P04940 Lamtor5-201ENSMUST00000145735 881 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 21.8 ms