Protein–RNA interactions for Protein: P04224

H-2 class II histocompatibility antigen, E-K alpha chain, mousemouse

Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P04224 Spc25-202ENSMUST00000112320 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
P04224 Rbm15-201ENSMUST00000061772 4343 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
P04224 Osbpl1a-208ENSMUST00000121888 2674 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
P04224 AI480526-205ENSMUST00000160255 1095 ntTSL 5 BASIC14.89□□□□□ -0.03
P04224 AC099934.2-201ENSMUST00000196389 70 ntBASIC14.89□□□□□ -0.03
P04224 AC156953.1-201ENSMUST00000196953 70 ntBASIC14.89□□□□□ -0.03
P04224 AC157822.2-201ENSMUST00000200291 70 ntBASIC14.89□□□□□ -0.03
P04224 Ap3s1-204ENSMUST00000225520 957 ntBASIC14.89□□□□□ -0.03
P04224 Cox6a1-201ENSMUST00000040154 571 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
P04224 Tradd-201ENSMUST00000034359 1689 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
P04224 Cspg5-204ENSMUST00000197850 7868 ntAPPRIS ALT2 TSL 5 BASIC14.89□□□□□ -0.03
P04224 Gm17484-201ENSMUST00000167899 2322 ntTSL 2 BASIC14.89□□□□□ -0.03
P04224 Akap8l-201ENSMUST00000050214 2075 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
P04224 Tmem233-201ENSMUST00000111997 2477 ntAPPRIS P1 TSL 2 BASIC14.89□□□□□ -0.03
P04224 Intu-201ENSMUST00000061590 1589 ntAPPRIS ALT2 TSL 2 BASIC14.89□□□□□ -0.03
P04224 Arhgap44-201ENSMUST00000047463 4074 ntAPPRIS P2 TSL 1 (best) BASIC14.89□□□□□ -0.03
P04224 Nudt17-204ENSMUST00000200387 2108 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
P04224 Etl4-208ENSMUST00000114614 5898 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
P04224 Coch-202ENSMUST00000164782 2681 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
P04224 2700046G09Rik-201ENSMUST00000181612 1641 ntTSL 2 BASIC14.88□□□□□ -0.03
P04224 Rnf111-201ENSMUST00000034739 4880 ntAPPRIS P2 TSL 1 (best) BASIC14.88□□□□□ -0.03
P04224 Arhgef16-201ENSMUST00000030898 2860 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
P04224 Asph-204ENSMUST00000084915 2884 ntTSL 5 BASIC14.88□□□□□ -0.03
P04224 Asic1-201ENSMUST00000023758 4114 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
P04224 Tssk2-201ENSMUST00000055374 1387 ntAPPRIS P1 BASIC14.88□□□□□ -0.03
P04224 2210016L21Rik-201ENSMUST00000031538 2607 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
P04224 Adss-201ENSMUST00000016105 2771 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
P04224 Ppt1-201ENSMUST00000030412 2381 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
P04224 Nanos1-201ENSMUST00000088237 3927 ntAPPRIS P1 BASIC14.88□□□□□ -0.03
P04224 Rara-202ENSMUST00000107473 3238 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
P04224 Nat9-201ENSMUST00000103038 1143 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
P04224 Hap1-201ENSMUST00000103124 2120 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
P04224 Tgfbr3l-201ENSMUST00000110993 1075 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
P04224 Rfc5-202ENSMUST00000111953 772 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
P04224 Rps14-202ENSMUST00000118551 602 ntAPPRIS P1 TSL 2 BASIC14.88□□□□□ -0.03
P04224 2300009A05Rik-201ENSMUST00000168665 595 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
P04224 Nt5c-201ENSMUST00000021082 858 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
P04224 Gins3-202ENSMUST00000212434 654 ntTSL 2 BASIC14.88□□□□□ -0.03
P04224 Pcyt1a-202ENSMUST00000104893 4951 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
P04224 Col5a3-201ENSMUST00000004201 6119 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
P04224 Acp5-204ENSMUST00000213815 1419 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
P04224 Acp5-206ENSMUST00000217643 1447 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
P04224 Npdc1-201ENSMUST00000055921 1412 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
P04224 Arhgef25-212ENSMUST00000222006 1896 ntTSL 5 BASIC14.88□□□□□ -0.03
P04224 Fbxo30-202ENSMUST00000129456 5060 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
P04224 St3gal3-203ENSMUST00000106410 2225 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
P04224 Nagpa-203ENSMUST00000147567 2230 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
P04224 Clvs2-201ENSMUST00000019920 2717 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
P04224 Ntrk1-201ENSMUST00000029712 2588 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
P04224 Nxnl1-201ENSMUST00000048243 2285 ntAPPRIS P1 TSL 2 BASIC14.87□□□□□ -0.03
P04224 Fem1a-201ENSMUST00000060253 6816 ntAPPRIS P1 BASIC14.87□□□□□ -0.03
P04224 Gm44544-201ENSMUST00000207052 1844 ntBASIC14.87□□□□□ -0.03
P04224 Macrod2-202ENSMUST00000078027 1669 ntAPPRIS P2 TSL 5 BASIC14.87□□□□□ -0.03
P04224 2610035D17Rik-201ENSMUST00000127263 1861 ntTSL 5 BASIC14.87□□□□□ -0.03
P04224 A430078I02Rik-202ENSMUST00000154066 2233 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
P04224 Tmed5-204ENSMUST00000118036 1045 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
P04224 Ost4-202ENSMUST00000132253 1144 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
P04224 Mpzl1-210ENSMUST00000194437 643 ntTSL 3 BASIC14.87□□□□□ -0.03
P04224 AC121965.1-201ENSMUST00000221422 861 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
P04224 Gm10493-201ENSMUST00000097270 612 ntBASIC14.87□□□□□ -0.03
P04224 Runx2-202ENSMUST00000113571 5898 ntAPPRIS P3 TSL 5 BASIC14.87□□□□□ -0.03
P04224 Rcc2-201ENSMUST00000038893 3767 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
P04224 Ing1-202ENSMUST00000209565 1971 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
P04224 Nsmf-203ENSMUST00000100334 2957 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
P04224 Zfp451-201ENSMUST00000019861 3958 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
P04224 Chpf-201ENSMUST00000079205 2892 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
P04224 Antxr2-202ENSMUST00000199088 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
P04224 Krt81-201ENSMUST00000061185 1857 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
P04224 Taz-201ENSMUST00000069722 1851 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
P04224 Gpat3-203ENSMUST00000112887 3059 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
P04224 Camk2b-202ENSMUST00000019133 2223 ntTSL 5 BASIC14.86□□□□□ -0.03
P04224 Gabarap-201ENSMUST00000018711 1351 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
P04224 Cend1-202ENSMUST00000124444 1733 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
P04224 Fiz1-203ENSMUST00000167804 2637 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
P04224 Krt19-201ENSMUST00000007317 1576 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
P04224 Gapvd1-202ENSMUST00000102800 8339 ntAPPRIS P2 TSL 1 (best) BASIC14.86□□□□□ -0.03
P04224 Tbc1d30-201ENSMUST00000064107 5695 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
P04224 Tekt1-201ENSMUST00000021155 1447 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
P04224 Ubap1-202ENSMUST00000108060 2514 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
P04224 Aurkaip1-203ENSMUST00000105592 1029 ntAPPRIS P1 TSL 2 BASIC14.86□□□□□ -0.03
P04224 Zfp444-202ENSMUST00000108565 849 ntTSL 3 BASIC14.86□□□□□ -0.03
P04224 Ccdc85b-201ENSMUST00000179549 609 ntAPPRIS P1 BASIC14.86□□□□□ -0.03
P04224 Jsrp1-201ENSMUST00000020435 955 ntAPPRIS ALT2 TSL 2 BASIC14.86□□□□□ -0.03
P04224 Gpr3-201ENSMUST00000052090 1116 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
P04224 Lrch1-205ENSMUST00000228252 3125 ntAPPRIS ALT2 BASIC14.86□□□□□ -0.03
P04224 Esx1-202ENSMUST00000113066 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
P04224 A230050P20Rik-201ENSMUST00000043911 1683 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
P04224 Gnas-202ENSMUST00000087871 3903 ntAPPRIS P4 TSL 1 (best) BASIC14.86□□□□□ -0.03
P04224 Kri1-205ENSMUST00000184326 2490 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
P04224 Chchd4-201ENSMUST00000040835 3472 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
P04224 Olfr1372-ps1-202ENSMUST00000203403 9812 ntTSL 5 BASIC14.85□□□□□ -0.03
P04224 Hspbp1-201ENSMUST00000079970 1593 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
P04224 Shh-201ENSMUST00000002708 2847 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
P04224 Rhof-201ENSMUST00000031401 2208 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
P04224 Eral1-201ENSMUST00000021183 2014 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
P04224 Ttll11-202ENSMUST00000112976 3077 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
P04224 Dpm1-209ENSMUST00000154111 2293 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
P04224 Phtf1-202ENSMUST00000063717 3327 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
P04224 Paqr6-204ENSMUST00000147991 1670 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
P04224 Polr2j-202ENSMUST00000111127 900 ntTSL 2 BASIC14.85□□□□□ -0.03
Retrieved 100 of 76,532 protein–RNA pairs in 52.1 ms