Protein–RNA interactions for Protein: P02463

Col4a1, Collagen alpha-1(IV) chain, mousemouse

Predictions only

Length 1,669 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a1P02463 Gm15295-201ENSMUST00000139874 488 ntTSL 5 BASIC20.77■□□□□ 0.92
Col4a1P02463 Gm2651-201ENSMUST00000203560 838 ntBASIC20.77■□□□□ 0.92
Col4a1P02463 Lmo1-203ENSMUST00000208136 772 ntTSL 2 BASIC20.77■□□□□ 0.92
Col4a1P02463 Ndufb9-201ENSMUST00000022980 704 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Col4a1P02463 Zkscan3-202ENSMUST00000116433 1421 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Col4a1P02463 Haghl-201ENSMUST00000077938 1405 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Col4a1P02463 Cyp2w1-201ENSMUST00000031521 1512 ntAPPRIS P1 TSL 5 BASIC20.77■□□□□ 0.92
Col4a1P02463 Rpf1-201ENSMUST00000029838 1661 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Col4a1P02463 Mettl27-205ENSMUST00000111221 1796 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Col4a1P02463 Sec14l1-203ENSMUST00000103026 2589 ntAPPRIS ALT2 TSL 5 BASIC20.77■□□□□ 0.92
Col4a1P02463 Kmt5c-201ENSMUST00000098853 2189 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
Col4a1P02463 Sigirr-203ENSMUST00000209294 1612 ntAPPRIS P2 TSL 1 (best) BASIC20.77■□□□□ 0.91
Col4a1P02463 Tsfm-207ENSMUST00000152054 655 ntTSL 3 BASIC20.77■□□□□ 0.91
Col4a1P02463 Hint3-203ENSMUST00000161074 875 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
Col4a1P02463 Gm1818-201ENSMUST00000169406 1184 ntBASIC20.77■□□□□ 0.91
Col4a1P02463 Tamm41-201ENSMUST00000032461 1168 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
Col4a1P02463 Ube2f-201ENSMUST00000059743 1154 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
Col4a1P02463 Rps4l-201ENSMUST00000071745 943 ntBASIC20.77■□□□□ 0.91
Col4a1P02463 Auh-202ENSMUST00000110031 3235 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Col4a1P02463 Mff-211ENSMUST00000161648 1715 ntTSL 5 BASIC20.76■□□□□ 0.91
Col4a1P02463 Cep83-201ENSMUST00000020212 3639 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Col4a1P02463 Tmem176a-201ENSMUST00000101426 1540 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Col4a1P02463 Dok3-201ENSMUST00000047877 1546 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Col4a1P02463 Snip1-201ENSMUST00000052183 2345 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Col4a1P02463 Trap1-201ENSMUST00000006137 2320 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Col4a1P02463 Gm15234-201ENSMUST00000141485 1058 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Col4a1P02463 Mir5131-201ENSMUST00000175426 93 ntBASIC20.76■□□□□ 0.91
Col4a1P02463 Msh3-205ENSMUST00000187424 666 ntTSL 2 BASIC20.76■□□□□ 0.91
Col4a1P02463 Timm10b-211ENSMUST00000210350 529 ntAPPRIS ALT2 TSL 2 BASIC20.76■□□□□ 0.91
Col4a1P02463 Chtf8-206ENSMUST00000177068 2931 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Col4a1P02463 Cnnm4-201ENSMUST00000153128 4547 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Col4a1P02463 Ing1-202ENSMUST00000209565 1971 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Col4a1P02463 A930012L18Rik-201ENSMUST00000181094 2364 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Col4a1P02463 Nudt11-201ENSMUST00000103007 3036 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Col4a1P02463 Rtn4-204ENSMUST00000102842 2257 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Col4a1P02463 Map6-206ENSMUST00000208605 2275 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
Col4a1P02463 Mfsd13a-202ENSMUST00000128041 2223 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Col4a1P02463 Grk3-203ENSMUST00000197776 1570 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Col4a1P02463 Psmb1-201ENSMUST00000014913 1036 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Col4a1P02463 Ccl27a-217ENSMUST00000155240 343 ntTSL 2 BASIC20.75■□□□□ 0.91
Col4a1P02463 Gm44430-201ENSMUST00000203376 995 ntBASIC20.75■□□□□ 0.91
Col4a1P02463 Ccdc174-201ENSMUST00000037783 1752 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Col4a1P02463 Dixdc1-207ENSMUST00000121634 2420 ntTSL 5 BASIC20.75■□□□□ 0.91
Col4a1P02463 Pdap1-201ENSMUST00000031627 2353 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Col4a1P02463 Arl11-201ENSMUST00000055159 1482 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Col4a1P02463 A130010J15Rik-201ENSMUST00000110831 2257 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Col4a1P02463 Clint1-202ENSMUST00000109261 3365 ntAPPRIS ALT2 TSL 5 BASIC20.74■□□□□ 0.91
Col4a1P02463 Napa-201ENSMUST00000006181 2517 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Col4a1P02463 Ptpra-201ENSMUST00000028769 3227 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Col4a1P02463 Sirt1-201ENSMUST00000020257 3905 ntAPPRIS P3 TSL 1 (best) BASIC20.74■□□□□ 0.91
Col4a1P02463 Chchd2-ps-201ENSMUST00000117487 462 ntBASIC20.74■□□□□ 0.91
Col4a1P02463 Rprl3-201ENSMUST00000157400 290 ntBASIC20.74■□□□□ 0.91
Col4a1P02463 Cyhr1-204ENSMUST00000177359 1110 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Col4a1P02463 Rfc4-201ENSMUST00000023598 1228 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Col4a1P02463 Ptprcap-201ENSMUST00000061086 927 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Col4a1P02463 Mtus2-201ENSMUST00000071878 1211 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Col4a1P02463 Wwc1-201ENSMUST00000018993 4531 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Col4a1P02463 Slc6a8-206ENSMUST00000164449 2151 ntTSL 5 BASIC20.74■□□□□ 0.91
Col4a1P02463 Ddx39b-203ENSMUST00000173731 2848 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Col4a1P02463 Cnksr1-201ENSMUST00000030645 2468 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Col4a1P02463 Kcnj4-201ENSMUST00000057801 2148 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Col4a1P02463 Herpud2-201ENSMUST00000008573 2781 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Col4a1P02463 Gm3248-201ENSMUST00000163885 2055 ntAPPRIS P1 TSL 5 BASIC20.74■□□□□ 0.91
Col4a1P02463 Lcmt2-201ENSMUST00000099486 2047 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Col4a1P02463 Rbpms2-201ENSMUST00000055844 1987 ntAPPRIS P2 TSL 1 (best) BASIC20.74■□□□□ 0.91
Col4a1P02463 Cldn7-201ENSMUST00000018713 1335 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Col4a1P02463 Cyp26b1-203ENSMUST00000204109 1340 ntTSL 5 BASIC20.74■□□□□ 0.91
Col4a1P02463 Nmt2-203ENSMUST00000102989 2162 ntAPPRIS P1 TSL 5 BASIC20.74■□□□□ 0.91
Col4a1P02463 Gde1-201ENSMUST00000038791 1582 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Col4a1P02463 Zscan10-204ENSMUST00000118369 1006 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Col4a1P02463 Gm6443-201ENSMUST00000203599 874 ntBASIC20.73■□□□□ 0.91
Col4a1P02463 Gm33054-201ENSMUST00000216588 313 ntTSL 5 BASIC20.73■□□□□ 0.91
Col4a1P02463 Spsb4-201ENSMUST00000055433 2720 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Col4a1P02463 Ppan-201ENSMUST00000004203 1670 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Col4a1P02463 Foxf1-201ENSMUST00000181504 2415 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Col4a1P02463 Ythdf1-201ENSMUST00000037299 3184 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Col4a1P02463 Dnajc24-201ENSMUST00000102555 1197 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Col4a1P02463 Naa10-206ENSMUST00000114391 834 ntTSL 5 BASIC20.73■□□□□ 0.91
Col4a1P02463 Gm18733-201ENSMUST00000173950 856 ntBASIC20.73■□□□□ 0.91
Col4a1P02463 AC108846.1-201ENSMUST00000214531 513 ntBASIC20.73■□□□□ 0.91
Col4a1P02463 Fcnb-201ENSMUST00000028179 1170 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Col4a1P02463 Isg15-201ENSMUST00000085425 756 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Col4a1P02463 B3gat2-203ENSMUST00000144602 1488 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Col4a1P02463 Ubb-201ENSMUST00000019649 1499 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Col4a1P02463 Shisa7-203ENSMUST00000119433 3481 ntAPPRIS P2 TSL 1 (best) BASIC20.73■□□□□ 0.91
Col4a1P02463 Arhgef9-208ENSMUST00000128565 2285 ntTSL 5 BASIC20.72■□□□□ 0.91
Col4a1P02463 Slc25a2-201ENSMUST00000058635 1369 ntAPPRIS P1 BASIC20.72■□□□□ 0.91
Col4a1P02463 Klhl2-201ENSMUST00000034017 3412 ntAPPRIS P2 TSL 1 (best) BASIC20.72■□□□□ 0.91
Col4a1P02463 Erc1-202ENSMUST00000079582 2304 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Col4a1P02463 2810459M11Rik-202ENSMUST00000165824 3331 ntAPPRIS P3 TSL 1 (best) BASIC20.72■□□□□ 0.91
Col4a1P02463 Blmh-201ENSMUST00000021197 2497 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Col4a1P02463 Gm38948-201ENSMUST00000210035 688 ntTSL 3 BASIC20.72■□□□□ 0.91
Col4a1P02463 Cenpp-201ENSMUST00000021818 1144 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Col4a1P02463 AC138767.1-201ENSMUST00000222661 415 ntBASIC20.72■□□□□ 0.91
Col4a1P02463 Hist1h4j-201ENSMUST00000087714 774 ntAPPRIS P1 BASIC20.72■□□□□ 0.91
Col4a1P02463 Rcn1-201ENSMUST00000006128 2720 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Col4a1P02463 Fosl1-201ENSMUST00000025850 1707 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Col4a1P02463 Cdca7-201ENSMUST00000102691 2424 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Col4a1P02463 Selenoh-201ENSMUST00000102646 783 ntAPPRIS P2 TSL 1 (best) BASIC20.71■□□□□ 0.91
Col4a1P02463 Mfap2-203ENSMUST00000166376 890 ntAPPRIS P1 TSL 2 BASIC20.71■□□□□ 0.91
Retrieved 100 of 76,532 protein–RNA pairs in 25 ms