Protein–RNA interactions for Protein: O89090

Sp1, Transcription factor Sp1, mousemouse

Predictions only

Length 784 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sp1O89090 Gm44450-201ENSMUST00000199528 114 ntBASIC17.1■□□□□ 0.33
Sp1O89090 Gnb1-203ENSMUST00000165335 3143 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Sp1O89090 Ager-201ENSMUST00000015596 1370 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
Sp1O89090 Polr3h-201ENSMUST00000023113 2514 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Sp1O89090 Abcg5-202ENSMUST00000163375 1613 ntTSL 5 BASIC17.1■□□□□ 0.33
Sp1O89090 Ythdf3-201ENSMUST00000108345 5102 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Sp1O89090 Sptbn4-207ENSMUST00000172269 8737 ntAPPRIS ALT2 TSL 2 BASIC17.1■□□□□ 0.33
Sp1O89090 Usb1-201ENSMUST00000034245 1758 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Sp1O89090 Rbpms2-201ENSMUST00000055844 1987 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Sp1O89090 Ahr-202ENSMUST00000116436 5548 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Sp1O89090 Crocc-211ENSMUST00000168157 6244 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Sp1O89090 Crocc-201ENSMUST00000040222 6248 ntTSL 5 BASIC17.09■□□□□ 0.33
Sp1O89090 Lpgat1-202ENSMUST00000110856 2792 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Sp1O89090 Arhgef16-201ENSMUST00000030898 2860 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Sp1O89090 Antxr1-201ENSMUST00000042025 5253 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Sp1O89090 8030462N17Rik-201ENSMUST00000074653 3418 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Sp1O89090 Ramp2-204ENSMUST00000129680 1178 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Sp1O89090 Snhg4-201ENSMUST00000181664 1190 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Sp1O89090 Ank2-226ENSMUST00000189368 339 ntBASIC17.09■□□□□ 0.33
Sp1O89090 Gm19935-201ENSMUST00000209208 979 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Sp1O89090 Rpp25l-201ENSMUST00000038434 856 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Sp1O89090 Odf3b-201ENSMUST00000049968 1040 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Sp1O89090 Insl6-201ENSMUST00000052380 708 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Sp1O89090 Rad51d-203ENSMUST00000092844 1228 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Sp1O89090 Xylt1-201ENSMUST00000032892 9020 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Sp1O89090 Rab11b-203ENSMUST00000173860 1544 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Sp1O89090 Atf4-201ENSMUST00000109605 1724 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Sp1O89090 Impdh1-210ENSMUST00000162739 2471 ntTSL 5 BASIC17.09■□□□□ 0.33
Sp1O89090 Sos1-201ENSMUST00000068714 8919 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
Sp1O89090 Adgra2-201ENSMUST00000033876 5760 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Sp1O89090 Ostm1-201ENSMUST00000040718 3006 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Sp1O89090 2210016L21Rik-201ENSMUST00000031538 2607 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Sp1O89090 Coil-201ENSMUST00000036649 2607 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Sp1O89090 Tedc2-201ENSMUST00000024930 2166 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Sp1O89090 Pdgfa-202ENSMUST00000076095 2060 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Sp1O89090 Gm26858-201ENSMUST00000180608 2040 ntTSL 5 BASIC17.08■□□□□ 0.33
Sp1O89090 B4galt3-205ENSMUST00000126699 1758 ntTSL 5 BASIC17.08■□□□□ 0.33
Sp1O89090 Mrpl49-201ENSMUST00000007482 1722 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Sp1O89090 Tox2-205ENSMUST00000165937 1675 ntAPPRIS P2 TSL 5 BASIC17.08■□□□□ 0.32
Sp1O89090 4930474H06Rik-201ENSMUST00000132822 1590 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Sp1O89090 Gm20422-202ENSMUST00000149782 956 ntTSL 2 BASIC17.08■□□□□ 0.32
Sp1O89090 Fbxo6-208ENSMUST00000168503 1240 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.32
Sp1O89090 Bvht-202ENSMUST00000183087 588 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Sp1O89090 Cd70-201ENSMUST00000019633 842 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Sp1O89090 Snhg10-202ENSMUST00000222812 527 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Sp1O89090 AC130713.1-201ENSMUST00000228853 1096 ntBASIC17.08■□□□□ 0.32
Sp1O89090 Exosc5-201ENSMUST00000079634 1020 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Sp1O89090 Man1c1-201ENSMUST00000038628 4285 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Sp1O89090 Mgea5-201ENSMUST00000026243 5024 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Sp1O89090 Eral1-201ENSMUST00000021183 2014 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Sp1O89090 Enah-210ENSMUST00000193074 1971 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.32
Sp1O89090 Celf3-208ENSMUST00000198316 2505 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Sp1O89090 Nrl-201ENSMUST00000062232 2504 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Sp1O89090 Bnip2-203ENSMUST00000117450 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Sp1O89090 Tenm3-204ENSMUST00000110346 2267 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Sp1O89090 Hcn2-202ENSMUST00000099513 3195 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Sp1O89090 Aicda-202ENSMUST00000160685 1292 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Sp1O89090 Znhit2-201ENSMUST00000162726 1281 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
Sp1O89090 Ube2t-201ENSMUST00000027687 1116 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Sp1O89090 Rpl36al-201ENSMUST00000054544 526 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Sp1O89090 Itsn2-215ENSMUST00000220311 6080 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Sp1O89090 Sh2b2-203ENSMUST00000196397 2797 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Sp1O89090 Sdc3-201ENSMUST00000070478 4973 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Sp1O89090 Nsmf-205ENSMUST00000114386 2685 ntTSL 5 BASIC17.07■□□□□ 0.32
Sp1O89090 Slc30a9-204ENSMUST00000162372 5711 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
Sp1O89090 Hsf5-201ENSMUST00000093956 4158 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
Sp1O89090 Slc16a7-205ENSMUST00000210780 2562 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
Sp1O89090 Spats2l-212ENSMUST00000170139 2315 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
Sp1O89090 Chst3-202ENSMUST00000135158 6108 ntAPPRIS P2 TSL 5 BASIC17.07■□□□□ 0.32
Sp1O89090 Nmnat3-201ENSMUST00000112935 2166 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Sp1O89090 Cep68-204ENSMUST00000162811 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Sp1O89090 Atp2a2-201ENSMUST00000031423 4486 ntAPPRIS P4 TSL 1 (best) BASIC17.06■□□□□ 0.32
Sp1O89090 Hoxb4-201ENSMUST00000049241 2566 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Sp1O89090 Cnpy1-202ENSMUST00000118882 1984 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Sp1O89090 Rara-204ENSMUST00000107475 2469 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Sp1O89090 Pdgfa-203ENSMUST00000110896 1363 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
Sp1O89090 Fxr1-201ENSMUST00000001620 2459 ntTSL 5 BASIC17.06■□□□□ 0.32
Sp1O89090 2610035D17Rik-201ENSMUST00000127263 1861 ntTSL 5 BASIC17.06■□□□□ 0.32
Sp1O89090 Sobp-201ENSMUST00000040275 4980 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Sp1O89090 Dbndd2-204ENSMUST00000109350 1055 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
Sp1O89090 Gm13524-201ENSMUST00000125869 662 ntTSL 3 BASIC17.06■□□□□ 0.32
Sp1O89090 Ndufb8-201ENSMUST00000026222 680 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Sp1O89090 Tmem270-201ENSMUST00000047305 932 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Sp1O89090 BC049762-201ENSMUST00000054226 760 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Sp1O89090 Hist1h2af-201ENSMUST00000073261 399 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
Sp1O89090 Zfp655-206ENSMUST00000200039 1765 ntAPPRIS ALT1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Sp1O89090 Gm26892-201ENSMUST00000181695 1636 ntTSL 5 BASIC17.06■□□□□ 0.32
Sp1O89090 2310035C23Rik-202ENSMUST00000086721 5414 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
Sp1O89090 4833418N02Rik-202ENSMUST00000146560 1495 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Sp1O89090 Sult2b1-204ENSMUST00000209739 1858 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
Sp1O89090 Gm45203-201ENSMUST00000206384 1831 ntBASIC17.05■□□□□ 0.32
Sp1O89090 Rhobtb3-201ENSMUST00000022078 4980 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Sp1O89090 Vps9d1-203ENSMUST00000122363 2952 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
Sp1O89090 Atxn7-203ENSMUST00000223880 2946 ntAPPRIS P2 BASIC17.05■□□□□ 0.32
Sp1O89090 Atp2c1-204ENSMUST00000112558 5642 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
Sp1O89090 Cldn7-201ENSMUST00000018713 1335 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Sp1O89090 Dohh-202ENSMUST00000121047 946 ntTSL 2 BASIC17.05■□□□□ 0.32
Sp1O89090 Gm12359-202ENSMUST00000141696 713 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Sp1O89090 Gm12359-203ENSMUST00000153181 680 ntTSL 3 BASIC17.05■□□□□ 0.32
Sp1O89090 Gm45328-201ENSMUST00000210942 917 ntBASIC17.05■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 25.4 ms