Protein–RNA interactions for Protein: O88472

Tnfrsf17, Tumor necrosis factor receptor superfamily member 17, mousemouse

Predictions only

Length 185 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfrsf17O88472 Gm28402-201ENSMUST00000188574 373 ntTSL 3 BASIC15.7■□□□□ 0.1
Tnfrsf17O88472 Gm38186-201ENSMUST00000192574 449 ntTSL 3 BASIC15.7■□□□□ 0.1
Tnfrsf17O88472 Pih1d1-206ENSMUST00000210139 1077 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Tnfrsf17O88472 Lrr1-203ENSMUST00000222520 767 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Tnfrsf17O88472 Fmr1nb-201ENSMUST00000069731 799 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Tnfrsf17O88472 Gm10190-201ENSMUST00000086549 324 ntAPPRIS P1 BASIC15.7■□□□□ 0.1
Tnfrsf17O88472 Pcdhac2-201ENSMUST00000047479 5888 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Tnfrsf17O88472 Cwh43-202ENSMUST00000065543 2316 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Tnfrsf17O88472 Gatad1-201ENSMUST00000007559 2545 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Tnfrsf17O88472 4930471E19Rik-201ENSMUST00000219022 1514 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Tnfrsf17O88472 Ddhd2-206ENSMUST00000211688 2265 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Tnfrsf17O88472 Spg7-211ENSMUST00000153285 2481 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
Tnfrsf17O88472 Myo1b-203ENSMUST00000114537 4618 ntTSL 5 BASIC15.69■□□□□ 0.1
Tnfrsf17O88472 Ftl2-ps-201ENSMUST00000118517 552 ntBASIC15.69■□□□□ 0.1
Tnfrsf17O88472 AC151286.1-201ENSMUST00000198489 145 ntBASIC15.69■□□□□ 0.1
Tnfrsf17O88472 Cmtm3-204ENSMUST00000212081 850 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
Tnfrsf17O88472 Nudt14-203ENSMUST00000221497 355 ntTSL 2 BASIC15.69■□□□□ 0.1
Tnfrsf17O88472 AC158982.1-201ENSMUST00000228377 901 ntBASIC15.69■□□□□ 0.1
Tnfrsf17O88472 Srrd-201ENSMUST00000031289 1110 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Tnfrsf17O88472 Erp27-201ENSMUST00000032343 1029 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Tnfrsf17O88472 Pfn3-201ENSMUST00000054146 545 ntAPPRIS P1 BASIC15.69■□□□□ 0.1
Tnfrsf17O88472 Mdk-202ENSMUST00000069423 773 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Tnfrsf17O88472 Gm15590-201ENSMUST00000078419 552 ntBASIC15.69■□□□□ 0.1
Tnfrsf17O88472 Aen-202ENSMUST00000107423 2230 ntAPPRIS P3 TSL 5 BASIC15.69■□□□□ 0.1
Tnfrsf17O88472 Ralgps2-205ENSMUST00000185198 2229 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Tnfrsf17O88472 Proc-201ENSMUST00000171765 1566 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
Tnfrsf17O88472 Fhl3-201ENSMUST00000038684 1664 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Tnfrsf17O88472 Neurl1b-201ENSMUST00000053020 6195 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Tnfrsf17O88472 Dach1-202ENSMUST00000071533 5219 ntAPPRIS P4 TSL 1 (best) BASIC15.69■□□□□ 0.1
Tnfrsf17O88472 Spata18-202ENSMUST00000071077 1978 ntAPPRIS P2 TSL 5 BASIC15.69■□□□□ 0.1
Tnfrsf17O88472 Ehmt2-203ENSMUST00000097342 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Tnfrsf17O88472 Ttc34-203ENSMUST00000207854 4733 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
Tnfrsf17O88472 Naif1-201ENSMUST00000048431 4650 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Tnfrsf17O88472 Spout1-201ENSMUST00000100220 1805 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Tnfrsf17O88472 Ankle1-201ENSMUST00000119976 2136 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
Tnfrsf17O88472 Smarca4-202ENSMUST00000098948 6376 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Tnfrsf17O88472 Matn4-202ENSMUST00000103104 2243 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Tnfrsf17O88472 Zdhhc13-201ENSMUST00000118927 2410 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Tnfrsf17O88472 Bmp6-201ENSMUST00000171970 3593 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Tnfrsf17O88472 Actrt3-201ENSMUST00000047630 1961 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Tnfrsf17O88472 Rimklb-201ENSMUST00000068242 4725 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Tnfrsf17O88472 Krt19-201ENSMUST00000007317 1576 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Tnfrsf17O88472 Rab3a-201ENSMUST00000034301 1363 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Tnfrsf17O88472 B9d2-201ENSMUST00000108403 1021 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Tnfrsf17O88472 Ptpa-208ENSMUST00000131476 989 ntTSL 2 BASIC15.68■□□□□ 0.1
Tnfrsf17O88472 Cabp2-205ENSMUST00000162908 911 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
Tnfrsf17O88472 Lmo1-203ENSMUST00000208136 772 ntTSL 2 BASIC15.68■□□□□ 0.1
Tnfrsf17O88472 Rad51d-203ENSMUST00000092844 1228 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Tnfrsf17O88472 Ndufb6-201ENSMUST00000095128 659 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Tnfrsf17O88472 Neto2-205ENSMUST00000216286 2932 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Tnfrsf17O88472 Irx3-202ENSMUST00000175795 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Tnfrsf17O88472 Rnf121-202ENSMUST00000096639 2249 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Tnfrsf17O88472 Runx1t1-201ENSMUST00000006761 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Tnfrsf17O88472 Cdk10-201ENSMUST00000036880 1642 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Tnfrsf17O88472 Scaf8-201ENSMUST00000076734 4869 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Tnfrsf17O88472 Gm26752-201ENSMUST00000181086 1537 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Tnfrsf17O88472 Rab5a-201ENSMUST00000017975 2357 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Tnfrsf17O88472 Tubb4b-ps1-201ENSMUST00000179460 1336 ntBASIC15.68■□□□□ 0.1
Tnfrsf17O88472 Kcns2-201ENSMUST00000072868 5456 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Tnfrsf17O88472 Mark2-206ENSMUST00000164205 3104 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Tnfrsf17O88472 Dhx15-201ENSMUST00000031061 3010 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Tnfrsf17O88472 Ppp1r13b-201ENSMUST00000054815 4389 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Tnfrsf17O88472 Tmem217-201ENSMUST00000114683 904 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Tnfrsf17O88472 Gm13186-201ENSMUST00000118031 316 ntBASIC15.67■□□□□ 0.1
Tnfrsf17O88472 Gm14140-201ENSMUST00000119999 995 ntBASIC15.67■□□□□ 0.1
Tnfrsf17O88472 Hint3-203ENSMUST00000161074 875 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Tnfrsf17O88472 Gm9727-201ENSMUST00000161387 555 ntBASIC15.67■□□□□ 0.1
Tnfrsf17O88472 Gm19345-201ENSMUST00000172815 993 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Tnfrsf17O88472 Gm7230-201ENSMUST00000173026 815 ntBASIC15.67■□□□□ 0.1
Tnfrsf17O88472 Gm43935-201ENSMUST00000203569 1050 ntBASIC15.67■□□□□ 0.1
Tnfrsf17O88472 Gm44081-201ENSMUST00000204406 643 ntTSL 3 BASIC15.67■□□□□ 0.1
Tnfrsf17O88472 Tmem52-201ENSMUST00000023920 932 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Tnfrsf17O88472 Snrnp25-201ENSMUST00000039601 821 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Tnfrsf17O88472 Ydjc-201ENSMUST00000069064 1297 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Tnfrsf17O88472 Lce3f-201ENSMUST00000090863 611 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Tnfrsf17O88472 Rela-201ENSMUST00000025867 2716 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Tnfrsf17O88472 B130046B21Rik-201ENSMUST00000181510 2216 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Tnfrsf17O88472 Aup1-201ENSMUST00000092618 1769 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Tnfrsf17O88472 Uhmk1-201ENSMUST00000027979 7864 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Tnfrsf17O88472 Gm7856-201ENSMUST00000117514 1493 ntBASIC15.66■□□□□ 0.1
Tnfrsf17O88472 Foxf1-201ENSMUST00000181504 2415 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Tnfrsf17O88472 Nt5dc3-201ENSMUST00000099396 5952 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Tnfrsf17O88472 Btnl9-201ENSMUST00000046522 5273 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Tnfrsf17O88472 Sh3yl1-202ENSMUST00000110880 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Tnfrsf17O88472 Gm26892-201ENSMUST00000181695 1636 ntTSL 5 BASIC15.66■□□□□ 0.1
Tnfrsf17O88472 Klk6-202ENSMUST00000107967 1172 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Tnfrsf17O88472 Naa10-206ENSMUST00000114391 834 ntTSL 5 BASIC15.66■□□□□ 0.1
Tnfrsf17O88472 Gm13830-201ENSMUST00000124378 417 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Tnfrsf17O88472 Rasd2-201ENSMUST00000132133 1299 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Tnfrsf17O88472 Gm13830-202ENSMUST00000144202 381 ntTSL 3 BASIC15.66■□□□□ 0.1
Tnfrsf17O88472 Tsfm-207ENSMUST00000152054 655 ntTSL 3 BASIC15.66■□□□□ 0.1
Tnfrsf17O88472 Calcb-203ENSMUST00000182816 706 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
Tnfrsf17O88472 AC090659.1-201ENSMUST00000224334 768 ntBASIC15.66■□□□□ 0.1
Tnfrsf17O88472 Med29-201ENSMUST00000003536 1281 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Tnfrsf17O88472 Nisch-221ENSMUST00000171735 1763 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Tnfrsf17O88472 Zhx1-202ENSMUST00000110168 5212 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
Tnfrsf17O88472 Tnpo2-207ENSMUST00000211601 2941 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Tnfrsf17O88472 Slc25a35-202ENSMUST00000102606 1828 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Tnfrsf17O88472 Gjb1-203ENSMUST00000119190 1585 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
Tnfrsf17O88472 Gnb2-212ENSMUST00000150063 1569 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Retrieved 100 of 76,532 protein–RNA pairs in 20.2 ms