Protein–RNA interactions for Protein: O55042

Snca, Alpha-synuclein, mousemouse

Known RBP Predictions only

Length 140 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SncaO55042 Usp43-202ENSMUST00000108677 4447 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
SncaO55042 Slc23a4-205ENSMUST00000201355 2003 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
SncaO55042 Eral1-201ENSMUST00000021183 2014 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
SncaO55042 Sfrp2-201ENSMUST00000029625 2003 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
SncaO55042 Prss56-201ENSMUST00000044533 2180 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
SncaO55042 Atf6b-202ENSMUST00000173984 2315 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
SncaO55042 Fam109a-203ENSMUST00000198271 2335 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
SncaO55042 Tmtc4-209ENSMUST00000148661 2719 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
SncaO55042 Hectd3-201ENSMUST00000050067 4583 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
SncaO55042 Poglut1-201ENSMUST00000036210 2758 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
SncaO55042 Prrt4-201ENSMUST00000159200 3411 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
SncaO55042 Usp53-201ENSMUST00000090379 6185 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
SncaO55042 Gm6576-201ENSMUST00000169678 883 ntBASIC14.03□□□□□ -0.16
SncaO55042 Gm30085-201ENSMUST00000209694 594 ntTSL 3 BASIC14.03□□□□□ -0.16
SncaO55042 Hsbp1-202ENSMUST00000212468 638 ntAPPRIS P1 TSL 2 BASIC14.03□□□□□ -0.16
SncaO55042 AC175538.2-202ENSMUST00000224997 1057 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
SncaO55042 1110004E09Rik-201ENSMUST00000023694 1143 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
SncaO55042 Exosc3-201ENSMUST00000030003 1077 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
SncaO55042 Bex2-201ENSMUST00000049130 903 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
SncaO55042 Mrps10-201ENSMUST00000060752 1109 ntTSL 5 BASIC14.03□□□□□ -0.16
SncaO55042 Shroom3-203ENSMUST00000113055 6765 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
SncaO55042 Nipsnap3b-201ENSMUST00000015391 1552 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
SncaO55042 Gm10654-201ENSMUST00000098653 1633 ntBASIC14.03□□□□□ -0.16
SncaO55042 Gm19721-201ENSMUST00000195284 1764 ntBASIC14.03□□□□□ -0.16
SncaO55042 Hoxc4-202ENSMUST00000165375 2121 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
SncaO55042 Rala-201ENSMUST00000009003 2688 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
SncaO55042 Gnas-202ENSMUST00000087871 3903 ntAPPRIS P4 TSL 1 (best) BASIC14.03□□□□□ -0.16
SncaO55042 Flvcr1-201ENSMUST00000085635 4040 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
SncaO55042 Rab6a-201ENSMUST00000032946 3214 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.16
SncaO55042 Clcn2-202ENSMUST00000120099 2812 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.16
SncaO55042 Zic1-202ENSMUST00000065360 2811 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
SncaO55042 Tmx1-201ENSMUST00000021471 2795 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
SncaO55042 Lrriq4-203ENSMUST00000172350 1797 ntAPPRIS P3 TSL 5 BASIC14.02□□□□□ -0.16
SncaO55042 Pdgfa-201ENSMUST00000046901 1543 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
SncaO55042 Arhgap8-201ENSMUST00000006029 1527 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.16
SncaO55042 Ankdd1a-201ENSMUST00000061766 1443 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.16
SncaO55042 Tubb4b-ps1-201ENSMUST00000179460 1336 ntBASIC14.02□□□□□ -0.17
SncaO55042 Gng10-201ENSMUST00000041160 1192 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
SncaO55042 Gng5-201ENSMUST00000090031 593 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
SncaO55042 Gm10602-201ENSMUST00000098239 609 ntBASIC14.02□□□□□ -0.17
SncaO55042 Pank3-201ENSMUST00000018990 7376 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
SncaO55042 Piezo2-201ENSMUST00000046860 2849 ntTSL 5 BASIC14.02□□□□□ -0.17
SncaO55042 Epha10-201ENSMUST00000059343 2544 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
SncaO55042 Yipf2-204ENSMUST00000213809 1883 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
SncaO55042 Snrnp48-201ENSMUST00000091641 1785 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
SncaO55042 Ppan-201ENSMUST00000004203 1670 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
SncaO55042 Rprm-201ENSMUST00000100089 1460 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
SncaO55042 Btbd10-203ENSMUST00000119278 2394 ntTSL 5 BASIC14.01□□□□□ -0.17
SncaO55042 Tnfsf13-201ENSMUST00000018896 1407 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
SncaO55042 Nfib-205ENSMUST00000107247 3267 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
SncaO55042 Zfp668-203ENSMUST00000106262 3169 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
SncaO55042 Gm21596-201ENSMUST00000178049 1316 ntBASIC14.01□□□□□ -0.17
SncaO55042 1110004F10Rik-202ENSMUST00000106607 1153 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
SncaO55042 Crct1-202ENSMUST00000107301 460 ntAPPRIS P1 TSL 2 BASIC14.01□□□□□ -0.17
SncaO55042 Arl4aos-201ENSMUST00000135883 748 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
SncaO55042 1110065P20Rik-203ENSMUST00000137769 659 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
SncaO55042 Aldh1a3-204ENSMUST00000174215 1066 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
SncaO55042 Gm37179-201ENSMUST00000194862 823 ntBASIC14.01□□□□□ -0.17
SncaO55042 Fcrlb-201ENSMUST00000094337 1284 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
SncaO55042 Nell1-201ENSMUST00000081872 6617 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
SncaO55042 Ostf1-201ENSMUST00000025631 2726 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
SncaO55042 A930024E05Rik-201ENSMUST00000148466 1896 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
SncaO55042 B230219D22Rik-201ENSMUST00000057844 4652 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
SncaO55042 Letm1-203ENSMUST00000148451 2478 ntTSL 2 BASIC14.01□□□□□ -0.17
SncaO55042 Sacs-204ENSMUST00000121091 4581 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
SncaO55042 Myh14-204ENSMUST00000207775 6499 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
SncaO55042 Med18-201ENSMUST00000102567 1675 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
SncaO55042 Rpf1-201ENSMUST00000029838 1661 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
SncaO55042 Pld2-201ENSMUST00000018429 3659 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
SncaO55042 A130014A01Rik-201ENSMUST00000183021 2323 ntBASIC14.01□□□□□ -0.17
SncaO55042 Dtwd2-203ENSMUST00000163590 2857 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
SncaO55042 Dlx1-201ENSMUST00000037119 4111 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
SncaO55042 Arhgef40-216ENSMUST00000182760 5130 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
SncaO55042 Anks1-203ENSMUST00000114842 5610 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
SncaO55042 Ntng1-207ENSMUST00000131027 1485 ntTSL 1 (best) BASIC14□□□□□ -0.17
SncaO55042 Ntng1-209ENSMUST00000138344 1452 ntTSL 1 (best) BASIC14□□□□□ -0.17
SncaO55042 Gm45560-201ENSMUST00000211492 1472 ntBASIC14□□□□□ -0.17
SncaO55042 Ssu72-201ENSMUST00000030905 1472 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
SncaO55042 Fbxl19-204ENSMUST00000188580 2601 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
SncaO55042 Map3k6-201ENSMUST00000030677 4334 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
SncaO55042 Gm43859-201ENSMUST00000200075 1412 ntBASIC14□□□□□ -0.17
SncaO55042 Dio3-201ENSMUST00000097228 1449 ntBASIC14□□□□□ -0.17
SncaO55042 Marveld1-201ENSMUST00000061111 3066 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
SncaO55042 Rilpl2-201ENSMUST00000031347 1391 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
SncaO55042 Tnfsf14-201ENSMUST00000005976 1859 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
SncaO55042 Snx25-203ENSMUST00000110378 3445 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
SncaO55042 Asic2-201ENSMUST00000021045 3436 ntTSL 1 (best) BASIC14□□□□□ -0.17
SncaO55042 Guf1-202ENSMUST00000087228 3433 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
SncaO55042 Ccdc184-201ENSMUST00000031914 2329 ntAPPRIS P1 BASIC14□□□□□ -0.17
SncaO55042 Smim1-209ENSMUST00000145527 562 ntAPPRIS P1 TSL 2 BASIC14□□□□□ -0.17
SncaO55042 Sco2-201ENSMUST00000167643 1143 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
SncaO55042 Trappc6a-201ENSMUST00000002112 785 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
SncaO55042 Rpl18a-206ENSMUST00000212709 700 ntTSL 2 BASIC14□□□□□ -0.17
SncaO55042 Ndufa6-201ENSMUST00000023085 560 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
SncaO55042 Tpsb2-201ENSMUST00000069616 1081 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
SncaO55042 Gm16499-203ENSMUST00000204633 2177 ntBASIC14□□□□□ -0.17
SncaO55042 Serbp1-203ENSMUST00000203077 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC14□□□□□ -0.17
SncaO55042 Sh2b3-201ENSMUST00000040308 2530 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
SncaO55042 Tbx21-201ENSMUST00000001484 2488 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
SncaO55042 Ngly1-201ENSMUST00000022310 2935 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 23.7 ms